FFCP PHASE1:Hg19::chr9:71736019..71736037,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:71736019..71736037,+
|short_description=p8@TJP2
|description=CAGE_peak_8_at_TJP2_5end
|association_with_transcript=-142bp_to_NM_001170414_5end
|EntrezGene...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9414 | |EntrezGene=9414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11828 | |HGNC=11828 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2R3 | |UniProt=B7Z2R3 | ||
|association_with_transcript=-142bp_to_NM_001170414_5end | |||
|cluster_id=chr9:71736019..71736037,+ | |||
|description=CAGE_peak_8_at_TJP2_5end | |||
|id=chr9:71736019..71736037,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.75e-27!254;CL:0000223!1.77e-09!59;CL:0002076!5.06e-09!43;CL:0000039!1.10e-07!7;CL:0000586!1.10e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.18e-13;7!CL:0000586;2.18e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.87e-13,7;CL:0000586,1.87e-13,7;CL:0000066,3.46e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.38e-15!106;DOID:0050687!3.59e-09!143;DOID:299!1.36e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.92e-09,106;DOID:0050687,3.04e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.83e-18!169;UBERON:0000925!2.83e-18!169;UBERON:0006595!2.83e-18!169;UBERON:0001007!1.64e-15!155;UBERON:0001555!1.64e-15!155;UBERON:0007026!1.64e-15!155;UBERON:0004921!2.19e-11!129;UBERON:0004185!2.19e-11!129;UBERON:0000464!2.90e-11!104;UBERON:0000466!5.16e-11!126;UBERON:0000077!9.60e-10!130;UBERON:0001004!1.38e-09!72;UBERON:0000161!1.21e-08!35;UBERON:0000468!1.23e-08!659;UBERON:0001008!3.92e-08!45;UBERON:0000058!8.42e-08!26;UBERON:0005911!8.42e-08!82;UBERON:0006554!1.58e-07!44;UBERON:0005177!1.97e-07!107;UBERON:0004111!2.73e-07!241;UBERON:0000166!4.13e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.40e-08;11!UBERON:0000473;2.64e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.06e-09,160;UBERON:0000925,1.06e-09,160;UBERON:0006595,1.06e-09,160;UBERON:0001004,2.22e-08,74;UBERON:0003135,2.58e-08,11;UBERON:0000473,2.86e-08,8;UBERON:0000161,5.84e-08,36;UBERON:0001007,1.12e-07,145;UBERON:0001555,1.12e-07,145;UBERON:0007026,1.12e-07,145;UBERON:0002553,2.16e-07,61;UBERON:0004921,3.88e-07,118;UBERON:0000166,4.51e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,1.52908960491121,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.327447688744282,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,1.13061588384802,0.838998872419812,0.275118041940067,0.626984899610432,0.775250277507987,1.06729878806013,1.33888245105868,0.402829317109147,0,0,0.367663080345869,0,1.07159673940896,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.73934767846967,0.272746120590835,0,1.82960559194393,1.72288698817931,0.929551542956147,0.621966330092223,2.01856680700503,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.614942192715568,0.171567810298526,0.219500570817251,0,0.100528972411631,0.370353780634118,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.644566922551274,0,0,0,0.451199612907412,0.924184045252977,0,0,1.37217117560738,1.13733384070897,0.510281115829547,0,1.54227252690289,0.541892875087706,0.501689773854853,0.764628819135115,0.831076008928724,0.895499018888713,0.438519753291869,0,0,0.328014645699706,0.325378394664303,1.33953315142039,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,1.14851441245126,1.2138933702666,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,1.71175595213568,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0.659006605437454,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0.635020748171649,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,3.92995134857262,0.146508179271894,0.121360521749513,0,0,1.43246690842614,0.890894042497916,1.84296421259539,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0.718946809178615,0.179021174675609,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0.699679999969566,0,0.341380344856499,2.2882828526349,1.65471377237555,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,1.95193241990045,0.615602068030377,0,2.99733075704478,2.51321404347362,0.651884231532048,0.957003479195758,0.732780747214898,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.282706142867882,0,2.98578579323551,0.619202951523374,0.611030144933625,0,0,0,0.067401132980677,0,0,0,1.76098157038881,0,4.3404284313433,1.20990716048664,0,0.126373159256976,0,0.103688191397247,0,0,0,0,1.13843818411917,0,2.2562765983567,0.979923974143776,0.174118413160805,0.34945333648406,0,0.0967563312890851,0.365446585430928,0,2.81268147816416,0,0.451961481561065,0,0,0,1.17330829640882,0.561111741760736,0.640358984218058,0,0.576361668616424,0.229073192331831,0.171594997861965,0.432164393964449,0.124252535565433,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0,0,0.916641696046735,0,0,0,0.223171457441873,0.268733889946905,0,0,0.393915911536118,0.412079291905832,1.41547442093788,0,0,0,0,2.25054407851027,1.2378549293751,2.9080823662043,0.2249738915515,0,0,1.0063040627978,0.630445658393585,0.629455057619977,0.105600336519406,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,1.40963004463334,0.320362237703084,0.78602152549833,0.828478110694391,0,0,0,3.19170628885091,0,0,0,0,3.45519011750515,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0.438568099157414,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,1.53867458491389,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0.0691572524642179,0,0,0.981477185010256,0.471878893390961,1.28400018965175,0.693153996902029,0,0,0,0.225630985047772,0,0,2.3571602503328,0.655087670040387,1.47856086217045,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,0.383287282918786,1.07140367175657,0,0,0,1.95145214357805,0,0,0,0.0657727735628491,0.354581522651905,1.00108261702862,1.0989032999072,0,1.40136081656895,0.913158720509496,0,0,1.35805433935647,0,0,0,0,0,0.3414369541879,2.76503864725637,2.15113679410139,0,0,4.65725755210022,0.9164274741762,0,0,1.56597604516909,1.96300467230486,2.43835849964539,0,0.102662806856247,0,0.485710993059139,1.16969731731053,0,0,1.01651473835064,0,0.452888530700021,1.31196068783506,0.218559560503957,2.35158648180761,0,1.88541237681301,0.196308467114945,0.297046400327086,0,0,0,0,0,0,1.41157948686277,0.882655033580851,0.730336388246517,1.37618785021362,0.286679166302903,0,0,0,1.0580536810308,0,0.462175628631418,0,0.252332849670158,0.218531143927391,0,2.14176542458162,2.40495664739004,4.31906027813771,2.50707539292375,0.0757786982182394,0,0,0,1.91910583710883,0.476128862927481,0.0645889098360061,0.0620747142958579,0.112131862580613,0.954707374172474,1.0105859447911,2.39488422686657,0,1.34704106029175,1.79305513481691,0.665320713092027,1.46525883499754,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0,2.66302709674205,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,1.52908960491121,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.327447688744282,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,1.13061588384802,0.838998872419812,0.275118041940067,0.626984899610432,0.775250277507987,1.06729878806013,1.33888245105868,0.402829317109147,0,0,0.367663080345869,0,1.07159673940896,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.73934767846967,0.272746120590835,0,1.82960559194393,1.72288698817931,0.929551542956147,0.621966330092223,2.01856680700503,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.614942192715568,0.171567810298526,0.219500570817251,0,0.100528972411631,0.370353780634118,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.644566922551274,0,0,0,0.451199612907412,0.924184045252977,0,0,1.37217117560738,1.13733384070897,0.510281115829547,0,1.54227252690289,0.541892875087706,0.501689773854853,0.764628819135115,0.831076008928724,0.895499018888713,0.438519753291869,0,0,0.328014645699706,0.325378394664303,1.33953315142039,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,1.14851441245126,1.2138933702666,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,1.71175595213568,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0.659006605437454,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0.635020748171649,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,3.92995134857262,0.146508179271894,0.121360521749513,0,0,1.43246690842614,0.890894042497916,1.84296421259539,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0.718946809178615,0.179021174675609,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0.699679999969566,0,0.341380344856499,2.2882828526349,1.65471377237555,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,1.95193241990045,0.615602068030377,0,2.99733075704478,2.51321404347362,0.651884231532048,0.957003479195758,0.732780747214898,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.282706142867882,0,2.98578579323551,0.619202951523374,0.611030144933625,0,0,0,0.067401132980677,0,0,0,1.76098157038881,0,4.3404284313433,1.20990716048664,0,0.126373159256976,0,0.103688191397247,0,0,0,0,1.13843818411917,0,2.2562765983567,0.979923974143776,0.174118413160805,0.34945333648406,0,0.0967563312890851,0.365446585430928,0,2.81268147816416,0,0.451961481561065,0,0,0,1.17330829640882,0.561111741760736,0.640358984218058,0,0.576361668616424,0.229073192331831,0.171594997861965,0.432164393964449,0.124252535565433,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0,0,0.916641696046735,0,0,0,0.223171457441873,0.268733889946905,0,0,0.393915911536118,0.412079291905832,1.41547442093788,0,0,0,0,2.25054407851027,1.2378549293751,2.9080823662043,0.2249738915515,0,0,1.0063040627978,0.630445658393585,0.629455057619977,0.105600336519406,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,1.40963004463334,0.320362237703084,0.78602152549833,0.828478110694391,0,0,0,3.19170628885091,0,0,0,0,3.45519011750515,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0.438568099157414,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,1.53867458491389,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0.0691572524642179,0,0,0.981477185010256,0.471878893390961,1.28400018965175,0.693153996902029,0,0,0,0.225630985047772,0,0,2.3571602503328,0.655087670040387,1.47856086217045,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,0.383287282918786,1.07140367175657,0,0,0,1.95145214357805,0,0,0,0.0657727735628491,0.354581522651905,1.00108261702862,1.0989032999072,0,1.40136081656895,0.913158720509496,0,0,1.35805433935647,0,0,0,0,0,0.3414369541879,2.76503864725637,2.15113679410139,0,0,4.65725755210022,0.9164274741762,0,0,1.56597604516909,1.96300467230486,2.43835849964539,0,0.102662806856247,0,0.485710993059139,1.16969731731053,0,0,1.01651473835064,0,0.452888530700021,1.31196068783506,0.218559560503957,2.35158648180761,0,1.88541237681301,0.196308467114945,0.297046400327086,0,0,0,0,0,0,1.41157948686277,0.882655033580851,0.730336388246517,1.37618785021362,0.286679166302903,0,0,0,1.0580536810308,0,0.462175628631418,0,0.252332849670158,0.218531143927391,0,2.14176542458162,2.40495664739004,4.31906027813771,2.50707539292375,0.0757786982182394,0,0,0,1.91910583710883,0.476128862927481,0.0645889098360061,0.0620747142958579,0.112131862580613,0.954707374172474,1.0105859447911,2.39488422686657,0,1.34704106029175,1.79305513481691,0.665320713092027,1.46525883499754,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0,2.66302709674205,0,0 | ||
|short_description=p8@TJP2 | |||
}} | }} |
Latest revision as of 16:40, 17 September 2015
Short description: | p8@TJP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TJP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -142bp_to_NM_001170414_5end |
EntrezGene: | TJP2 |
HGNC: | 11828 |
UniProt: | B7Z2R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.87e-13 | 7 |
germ cell | 1.87e-13 | 7 |
epithelial cell | 3.46e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.06e-09 | 160 |
endoderm | 1.06e-09 | 160 |
presumptive endoderm | 1.06e-09 | 160 |
respiratory system | 2.22e-08 | 74 |
male reproductive organ | 2.58e-08 | 11 |
testis | 2.86e-08 | 8 |
orifice | 5.84e-08 | 36 |
digestive system | 1.12e-07 | 145 |
digestive tract | 1.12e-07 | 145 |
primitive gut | 1.12e-07 | 145 |
anatomical cavity | 2.16e-07 | 61 |
subdivision of digestive tract | 3.88e-07 | 118 |
oral opening | 4.51e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.92e-09 | 106 |
cell type cancer | 3.04e-07 | 143 |