FFCP PHASE1:Hg19::chr3:157161308..157161324,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:157161308..157161324,+ | |||
|description=CAGE_peak_at_chr3:157161308..157161324,+ | |||
|id=chr3:157161308..157161324,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.56e-16!180;CL:0000680!2.94e-11!57;CL:0000056!2.94e-11!57;CL:0000355!2.94e-11!57;CL:0000048!2.79e-10!430;CL:0000723!6.96e-10!436;CL:0000187!1.24e-09!54;CL:0000034!2.26e-09!444;CL:0000057!2.29e-09!75;CL:0000183!2.12e-08!59;CL:0000393!3.51e-08!60;CL:0000211!3.51e-08!60;CL:0002371!3.99e-08!591;CL:0000188!2.25e-07!9;CL:0002334!2.74e-07!12;CL:0000144!5.54e-07!625;CL:0000222!9.80e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002561;2.59e-12;2!CL:0002617;2.59e-12;2!CL:0000214;8.31e-09;3!CL:0002579;8.96e-09;3!CL:0002615;1.21e-08;3!CL:0000515;1.21e-08;3!CL:0000136;1.02e-07;13!CL:0000056;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.68e-14,15;CL:0002617,1.85e-12,2;CL:0002561,2.32e-12,2;CL:0000214,8.31e-09,3;CL:0002579,8.96e-09,3;CL:0002615,1.30e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000515;8.61e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;3.28e-23;1!DOID:1192;1.21e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.10e-23,1;DOID:1192,1.04e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.77e-10!61;UBERON:0002036!3.77e-10!61;UBERON:0003082!3.77e-10!61;UBERON:0000486!1.03e-09!82;UBERON:0002385!1.19e-09!63;UBERON:0001015!1.19e-09!63;UBERON:0000383!1.19e-09!63;UBERON:0004290!3.56e-09!70;UBERON:0000914!1.29e-07!83;UBERON:0002329!1.29e-07!83;UBERON:0003077!1.29e-07!83;UBERON:0003059!1.29e-07!83;UBERON:0007282!1.29e-07!83;UBERON:0009618!1.29e-07!83;UBERON:0007285!1.29e-07!83;UBERON:0002204!2.26e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.48e-23;9!UBERON:0000042;7.48e-23;9!UBERON:0003688;9.73e-16;6!UBERON:0002358;9.73e-16;6!UBERON:0003684;9.73e-16;6!UBERON:0001178;9.73e-16;6!UBERON:0005933;2.59e-12;2!UBERON:0005942;2.59e-12;2!UBERON:0005932;2.59e-12;2!UBERON:0006915;8.31e-09;3!UBERON:0007616;8.31e-09;3!UBERON:0002217;8.31e-09;3!UBERON:0002018;8.31e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,2.60e-17,12;UBERON:0000042,2.60e-17,12;UBERON:0003688,1.05e-15,6;UBERON:0002358,1.05e-15,6;UBERON:0003684,1.05e-15,6;UBERON:0001178,1.05e-15,6;UBERON:0005933,2.32e-12,2;UBERON:0005942,2.32e-12,2;UBERON:0005932,2.32e-12,2;UBERON:0006915,8.31e-09,3;UBERON:0007616,8.31e-09,3;UBERON:0002217,8.31e-09,3;UBERON:0002018,8.31e-09,3 | |||
|phase1_expression=1.99846217197612,0.428201047781966,1.26858963686374,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0,0.573673241497627,0,0,0,0,0.622422070799533,0,0.326923806226917,0.302714855289863,0,0.468642863667593,0,0.570471821544449,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0.640672166455702,0.423863802319124,0.300091096084402,0,0,0,0,0.0974370051611986,0,1.56484827691909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.866198686566443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0,0,0,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.460385919864187,0,2.56278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.413509717453592,0.322260734604821,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0.855877976067841,0.636406495851874,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0.35667105148125,0,0.211107635297664,4.61012850143863,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.915360273587694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0.473328002922261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:157161308..157161324,+ | |||
}} |
Latest revision as of 17:34, 29 July 2015
Short description: | p@chr3:157161308..157161324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:157161308..157161324, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.68e-14 | 15 |
adipocyte of breast | 1.85e-12 | 2 |
outer root sheath cell | 2.32e-12 | 2 |
synovial cell | 8.31e-09 | 3 |
omentum preadipocyte | 8.96e-09 | 3 |
adipocyte of omentum tissue | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 2.60e-17 | 12 |
serous membrane | 2.60e-17 | 12 |
omentum | 1.05e-15 | 6 |
peritoneum | 1.05e-15 | 6 |
abdominal cavity | 1.05e-15 | 6 |
visceral peritoneum | 1.05e-15 | 6 |
hair root sheath | 2.32e-12 | 2 |
hair outer root sheath | 2.32e-12 | 2 |
bulb of hair follicle | 2.32e-12 | 2 |
stratified squamous epithelium | 8.31e-09 | 3 |
layer of synovial tissue | 8.31e-09 | 3 |
synovial joint | 8.31e-09 | 3 |
synovial membrane of synovial joint | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.10e-23 | 1 |
peripheral nervous system neoplasm | 1.04e-08 | 3 |