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FFCP PHASE1:Mm9::chr12:3834817..3834843,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=68|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:3834817..3834843,+|id=chr12:3834817..3834843,+|ontology_enrichment_celltype=CL:0000624!2.57e-07!8;CL:0000893!3.69e-07!6;CL:0002489!3.69e-07!6;CL:0000898!3.69e-07!6;CL:0000809!3.69e-07!6;CL:0000810!3.69e-07!6;CL:0000895!3.69e-07!6;CL:0000808!3.69e-07!6;CL:0000894!3.69e-07!6;CL:0000806!3.69e-07!6;CL:0000807!3.69e-07!6;CL:0000805!3.69e-07!6;CL:0002425!3.69e-07!6;CL:0002436!3.69e-07!6;CL:0002427!3.69e-07!6;CL:0002428!3.69e-07!6;CL:0002429!3.69e-07!6;CL:0002433!3.69e-07!6;CL:0002431!3.69e-07!6;CL:0002432!3.69e-07!6|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.78e-11!29;UBERON:0002370!2.24e-10!23;UBERON:0000974!2.24e-10!23;UBERON:0004807!2.24e-10!23;UBERON:0005058!2.24e-10!23;UBERON:0003351!2.24e-10!23;UBERON:0009113!2.24e-10!23;UBERON:0003295!2.24e-10!23;UBERON:0009722!2.24e-10!23;UBERON:0005562!2.24e-10!23;UBERON:0007690!2.24e-10!23;UBERON:0006562!9.07e-10!24;UBERON:0003408!9.07e-10!24;UBERON:0001557!9.07e-10!24;UBERON:0001042!9.07e-10!24;UBERON:0008814!9.07e-10!24;UBERON:0009145!9.07e-10!24;UBERON:0000072!3.15e-08!27;UBERON:0000065!2.28e-07!41;UBERON:0002390!3.25e-07!45;UBERON:0003061!3.25e-07!45;UBERON:0001004!4.48e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,23.3709278771767,22.9383235795554,17.8066686954525,16.9116977070113,0,0.611942816932982,0.333109761815663,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.442655759869801,0.590440591918409,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.546776910884101,0.228778173206523,0.339956859987711,0.979660166265606,0.690999869022119,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,0,0,0,0,0,0.360586348559907,0.590758108698309,0.403865799792591,0.304827226619999,0.705783295957884,0.38983152295901,0.192423683280659,0.818138315270983,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr12:3834817..3834843,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=68
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr12:3834817..3834843,+
|description=CAGE_peak_at_chr12:3834817..3834843,+
|id=chr12:3834817..3834843,+
|ontology_enrichment_celltype=CL:0000624!2.57e-07!8;CL:0000893!3.69e-07!6;CL:0002489!3.69e-07!6;CL:0000898!3.69e-07!6;CL:0000809!3.69e-07!6;CL:0000810!3.69e-07!6;CL:0000895!3.69e-07!6;CL:0000808!3.69e-07!6;CL:0000894!3.69e-07!6;CL:0000806!3.69e-07!6;CL:0000807!3.69e-07!6;CL:0000805!3.69e-07!6;CL:0002425!3.69e-07!6;CL:0002436!3.69e-07!6;CL:0002427!3.69e-07!6;CL:0002428!3.69e-07!6;CL:0002429!3.69e-07!6;CL:0002433!3.69e-07!6;CL:0002431!3.69e-07!6;CL:0002432!3.69e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.78e-11!29;UBERON:0002370!2.24e-10!23;UBERON:0000974!2.24e-10!23;UBERON:0004807!2.24e-10!23;UBERON:0005058!2.24e-10!23;UBERON:0003351!2.24e-10!23;UBERON:0009113!2.24e-10!23;UBERON:0003295!2.24e-10!23;UBERON:0009722!2.24e-10!23;UBERON:0005562!2.24e-10!23;UBERON:0007690!2.24e-10!23;UBERON:0006562!9.07e-10!24;UBERON:0003408!9.07e-10!24;UBERON:0001557!9.07e-10!24;UBERON:0001042!9.07e-10!24;UBERON:0008814!9.07e-10!24;UBERON:0009145!9.07e-10!24;UBERON:0000072!3.15e-08!27;UBERON:0000065!2.28e-07!41;UBERON:0002390!3.25e-07!45;UBERON:0003061!3.25e-07!45;UBERON:0001004!4.48e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,23.3709278771767,22.9383235795554,17.8066686954525,16.9116977070113,0,0.611942816932982,0.333109761815663,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.442655759869801,0.590440591918409,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.546776910884101,0.228778173206523,0.339956859987711,0.979660166265606,0.690999869022119,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,0,0,0,0,0,0.360586348559907,0.590758108698309,0.403865799792591,0.304827226619999,0.705783295957884,0.38983152295901,0.192423683280659,0.818138315270983,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0
|short_description=p@chr12:3834817..3834843,+
}}

Latest revision as of 00:39, 5 August 2015

Short description:p@chr12:3834817..3834843, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr12:3834817..3834843, +
Coexpression cluster:MCL_coexpression_mm9:68
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data