FFCP PHASE1:Mm9::chr13:115593480..115593522,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:115593480..115593522,+|id=chr13:115593480..115593522,+|ontology_enrichment_celltype=CL:0002563!8.09e-13!9;CL:0002251!8.09e-13!9;CL:0000239!3.10e-09!6;CL:0000677!3.10e-09!6;CL:0000212!3.10e-09!6;CL:0000584!3.10e-09!6;CL:0000075!9.82e-08!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.56e-23,9;CL:0002251,1.56e-23,9;CL:0000239,1.56e-16,6;CL:0000677,1.56e-16,6;CL:0000584,1.56e-16,6;CL:0000075,4.51e-14,7;CL:0000066,1.71e-13,25;CL:0002076,1.87e-13,15;CL:0000223,1.12e-09,20;CL:0000682,7.75e-09,3;CL:0002250,1.42e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.99e-22!43;UBERON:0000344!2.55e-20!15;UBERON:0005409!3.78e-18!59;UBERON:0001242!6.12e-18!13;UBERON:0000060!6.12e-18!13;UBERON:0001262!6.12e-18!13;UBERON:0004786!6.12e-18!13;UBERON:0003350!8.09e-13!9;UBERON:0004808!8.09e-13!9;UBERON:0001277!8.09e-13!9;UBERON:0004923!3.23e-12!24;UBERON:0000485!4.98e-10!11;UBERON:0004119!1.90e-09!130;UBERON:0000925!1.90e-09!130;UBERON:0006595!1.90e-09!130;UBERON:0001007!3.59e-09!128;UBERON:0001555!3.59e-09!128;UBERON:0007026!3.59e-09!128;UBERON:0004921!5.06e-08!126;UBERON:0004185!5.06e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.74e-59,31;UBERON:0000344,3.02e-38,15;UBERON:0005409,4.90e-37,47;UBERON:0001242,1.42e-33,13;UBERON:0001262,1.42e-33,13;UBERON:0004786,1.42e-33,13;UBERON:0003350,1.56e-23,9;UBERON:0004808,1.56e-23,9;UBERON:0001277,1.56e-23,9;UBERON:0004923,1.24e-22,24;UBERON:0000485,5.94e-19,11;UBERON:0001007,3.45e-15,116;UBERON:0001555,3.45e-15,116;UBERON:0007026,3.45e-15,116;UBERON:0004119,7.93e-15,118;UBERON:0000925,7.93e-15,118;UBERON:0006595,7.93e-15,118;UBERON:0004921,5.24e-13,114;UBERON:0002108,2.76e-11,4;UBERON:0000331,1.12e-08,3;UBERON:0002116,1.12e-08,3;UBERON:0001204,1.12e-08,3;UBERON:0001168,1.12e-08,3|phase1_expression=0,26.5221309805914,21.3849642513082,61.4002348952865,49.5886772646884,5.03637815735669,5.60670337429262,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,6.42345986988076,21.2465826722557,13.3536218809313,11.635446565038,25.8431850460668,20.1624103807945,4.21287970245079,0,0,0,11.8429164098023,9.64160943079256,7.14592746918292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,29.377561348988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.8320306732133,18.2470890997846,0,0,0.77320476793256,3.22693639397348,3.55804870151792,5.32631753115166,29.4208018157597,2.63518327558417,5.27803938480566,6.76452004939913,4.28920991662064,22.4704852163555,28.0979464837102,34.2522989997512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,26.8162369699463,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.247960367176008,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.618105171716683,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.771626443924566,0,0,0.214871054048298,0,0,0|short_description=p@chr13:115593480..115593522,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:115593480..115593522,+ | |||
|description=CAGE_peak_at_chr13:115593480..115593522,+ | |||
|id=chr13:115593480..115593522,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.09e-13!9;CL:0002251!8.09e-13!9;CL:0000239!3.10e-09!6;CL:0000677!3.10e-09!6;CL:0000212!3.10e-09!6;CL:0000584!3.10e-09!6;CL:0000075!9.82e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.56e-23,9;CL:0002251,1.56e-23,9;CL:0000239,1.56e-16,6;CL:0000677,1.56e-16,6;CL:0000584,1.56e-16,6;CL:0000075,4.51e-14,7;CL:0000066,1.71e-13,25;CL:0002076,1.87e-13,15;CL:0000223,1.12e-09,20;CL:0000682,7.75e-09,3;CL:0002250,1.42e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.99e-22!43;UBERON:0000344!2.55e-20!15;UBERON:0005409!3.78e-18!59;UBERON:0001242!6.12e-18!13;UBERON:0000060!6.12e-18!13;UBERON:0001262!6.12e-18!13;UBERON:0004786!6.12e-18!13;UBERON:0003350!8.09e-13!9;UBERON:0004808!8.09e-13!9;UBERON:0001277!8.09e-13!9;UBERON:0004923!3.23e-12!24;UBERON:0000485!4.98e-10!11;UBERON:0004119!1.90e-09!130;UBERON:0000925!1.90e-09!130;UBERON:0006595!1.90e-09!130;UBERON:0001007!3.59e-09!128;UBERON:0001555!3.59e-09!128;UBERON:0007026!3.59e-09!128;UBERON:0004921!5.06e-08!126;UBERON:0004185!5.06e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.74e-59,31;UBERON:0000344,3.02e-38,15;UBERON:0005409,4.90e-37,47;UBERON:0001242,1.42e-33,13;UBERON:0001262,1.42e-33,13;UBERON:0004786,1.42e-33,13;UBERON:0003350,1.56e-23,9;UBERON:0004808,1.56e-23,9;UBERON:0001277,1.56e-23,9;UBERON:0004923,1.24e-22,24;UBERON:0000485,5.94e-19,11;UBERON:0001007,3.45e-15,116;UBERON:0001555,3.45e-15,116;UBERON:0007026,3.45e-15,116;UBERON:0004119,7.93e-15,118;UBERON:0000925,7.93e-15,118;UBERON:0006595,7.93e-15,118;UBERON:0004921,5.24e-13,114;UBERON:0002108,2.76e-11,4;UBERON:0000331,1.12e-08,3;UBERON:0002116,1.12e-08,3;UBERON:0001204,1.12e-08,3;UBERON:0001168,1.12e-08,3 | |||
|phase1_expression=0,26.5221309805914,21.3849642513082,61.4002348952865,49.5886772646884,5.03637815735669,5.60670337429262,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,6.42345986988076,21.2465826722557,13.3536218809313,11.635446565038,25.8431850460668,20.1624103807945,4.21287970245079,0,0,0,11.8429164098023,9.64160943079256,7.14592746918292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,29.377561348988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.8320306732133,18.2470890997846,0,0,0.77320476793256,3.22693639397348,3.55804870151792,5.32631753115166,29.4208018157597,2.63518327558417,5.27803938480566,6.76452004939913,4.28920991662064,22.4704852163555,28.0979464837102,34.2522989997512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,26.8162369699463,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.247960367176008,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.618105171716683,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.771626443924566,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr13:115593480..115593522,+ | |||
}} |
Latest revision as of 15:31, 5 August 2015
Short description: | p@chr13:115593480..115593522, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:115593480..115593522, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.56e-23 | 9 |
epithelial cell of alimentary canal | 1.56e-23 | 9 |
brush border epithelial cell | 1.56e-16 | 6 |
gut absorptive cell | 1.56e-16 | 6 |
enterocyte | 1.56e-16 | 6 |
columnar/cuboidal epithelial cell | 4.51e-14 | 7 |
epithelial cell | 1.71e-13 | 25 |
endo-epithelial cell | 1.87e-13 | 15 |
endodermal cell | 1.12e-09 | 20 |
M cell of gut | 7.75e-09 | 3 |
intestinal crypt stem cell | 1.42e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.74e-59 | 31 |
mucosa | 3.02e-38 | 15 |
gastrointestinal system | 4.90e-37 | 47 |
intestinal mucosa | 1.42e-33 | 13 |
wall of intestine | 1.42e-33 | 13 |
gastrointestinal system mucosa | 1.42e-33 | 13 |
epithelium of mucosa | 1.56e-23 | 9 |
gastrointestinal system epithelium | 1.56e-23 | 9 |
intestinal epithelium | 1.56e-23 | 9 |
organ component layer | 1.24e-22 | 24 |
simple columnar epithelium | 5.94e-19 | 11 |
digestive system | 3.45e-15 | 116 |
digestive tract | 3.45e-15 | 116 |
primitive gut | 3.45e-15 | 116 |
endoderm-derived structure | 7.93e-15 | 118 |
endoderm | 7.93e-15 | 118 |
presumptive endoderm | 7.93e-15 | 118 |
subdivision of digestive tract | 5.24e-13 | 114 |
small intestine | 2.76e-11 | 4 |
ileal mucosa | 1.12e-08 | 3 |
ileum | 1.12e-08 | 3 |
mucosa of small intestine | 1.12e-08 | 3 |
wall of small intestine | 1.12e-08 | 3 |