FFCP PHASE1:Mm9::chr13:83643302..83643309,+: Difference between revisions
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{{FFCP|EntrezGene=17260|HGNC=|MCL_coexpression_id=2|UniProt=Q8CFN5,Q3V1B5|association_with_transcript=269bp_to_ENSMUST00000005722,ENSMUST00000109560,ENSMUST00000163888,ENSMUST00000168620,NM_001170537,NM_025282,uc007rie.2,uc007rik.2_5end|description=CAGE_peak_12_at_Mef2c_5end|id=chr13:83643302..83643309,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.19e-14!10;UBERON:0000411!3.19e-14!10;UBERON:0001950!3.19e-14!10;UBERON:0002619!4.67e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.00e-33,10;UBERON:0000411,1.00e-33,10;UBERON:0001950,1.00e-33,10;UBERON:0002619,4.62e-19,17;UBERON:0000956,3.24e-18,21;UBERON:0001869,3.24e-18,21;UBERON:0000203,3.24e-18,21;UBERON:0003528,1.37e-12,29;UBERON:0002791,1.37e-12,29;UBERON:0001893,1.37e-12,29;UBERON:0002020,2.03e-10,34;UBERON:0002780,8.29e-09,39;UBERON:0001890,8.29e-09,39;UBERON:0006240,8.29e-09,39;UBERON:0003080,1.56e-08,40;UBERON:0002616,3.82e-07,46;UBERON:0000955,6.00e-07,47;UBERON:0006238,6.00e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.970601099684455,1.76673214768315,0,0,0,0,0,0,0,0,0,0,0,2.08589184230732,2.55715457330331,0,0.162241263067758,0,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.753524089178575,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0.876782929710299,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0,0,0,0,0,0,0.214368379079066,0,5.0827665835536,5.06357760157895,6.87474616127276,4.46818274093588,6.85082519770642,6.7985450765073,7.42524750254986,6.30449684513909,4.07828168085784,5.1776031175182,0.207574695168353,1.19707462020309,0,0.243106717068294,0.419226325255965,0,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.565879024158229,1.21733959710847,1.08842759088278,1.14870937911227,0,0.927074607558844,0.77163688185482,0,0.441596760403192,1.71434626192708,0.354951612318675,0.476872379894642,0.290692833264657,0.658765662907314,1.01537529470012,0.548783918618318,1.8414879800649,0.950628796921032,1.12228454331548,0.474540072496697,0.492522411877817,0,1.54936841185966,0.192906610981141,0.249810577937946,0.233931608445408,1.07435527024149,1.91288332068843,0.220591419119515,0.695603506861264|short_description=p12@Mef2c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17260 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFN5,Q3V1B5 | |||
|association_with_transcript=269bp_to_ENSMUST00000005722,ENSMUST00000109560,ENSMUST00000163888,ENSMUST00000168620,NM_001170537,NM_025282,uc007rie.2,uc007rik.2_5end | |||
|cluster_id=chr13:83643302..83643309,+ | |||
|description=CAGE_peak_12_at_Mef2c_5end | |||
|id=chr13:83643302..83643309,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.19e-14!10;UBERON:0000411!3.19e-14!10;UBERON:0001950!3.19e-14!10;UBERON:0002619!4.67e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.00e-33,10;UBERON:0000411,1.00e-33,10;UBERON:0001950,1.00e-33,10;UBERON:0002619,4.62e-19,17;UBERON:0000956,3.24e-18,21;UBERON:0001869,3.24e-18,21;UBERON:0000203,3.24e-18,21;UBERON:0003528,1.37e-12,29;UBERON:0002791,1.37e-12,29;UBERON:0001893,1.37e-12,29;UBERON:0002020,2.03e-10,34;UBERON:0002780,8.29e-09,39;UBERON:0001890,8.29e-09,39;UBERON:0006240,8.29e-09,39;UBERON:0003080,1.56e-08,40;UBERON:0002616,3.82e-07,46;UBERON:0000955,6.00e-07,47;UBERON:0006238,6.00e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.970601099684455,1.76673214768315,0,0,0,0,0,0,0,0,0,0,0,2.08589184230732,2.55715457330331,0,0.162241263067758,0,0.248813941220186,0,0,0.130120442962704,0,0.180062129805349,0.753524089178575,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0.876782929710299,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0,0,0,0,0,0,0.214368379079066,0,5.0827665835536,5.06357760157895,6.87474616127276,4.46818274093588,6.85082519770642,6.7985450765073,7.42524750254986,6.30449684513909,4.07828168085784,5.1776031175182,0.207574695168353,1.19707462020309,0,0.243106717068294,0.419226325255965,0,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.565879024158229,1.21733959710847,1.08842759088278,1.14870937911227,0,0.927074607558844,0.77163688185482,0,0.441596760403192,1.71434626192708,0.354951612318675,0.476872379894642,0.290692833264657,0.658765662907314,1.01537529470012,0.548783918618318,1.8414879800649,0.950628796921032,1.12228454331548,0.474540072496697,0.492522411877817,0,1.54936841185966,0.192906610981141,0.249810577937946,0.233931608445408,1.07435527024149,1.91288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p12@Mef2c | |||
}} |
Latest revision as of 23:23, 1 October 2015
Short description: | p12@Mef2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Mef2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 269bp_to_ENSMUST00000005722, ENSMUST00000109560, ENSMUST00000163888, ENSMUST00000168620, NM_001170537, NM_025282, uc007rie.2, uc007rik.2_5end |
EntrezGene: | Mef2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.00e-33 | 10 |
visual cortex | 1.00e-33 | 10 |
neocortex | 1.00e-33 | 10 |
regional part of cerebral cortex | 4.62e-19 | 17 |
cerebral cortex | 3.24e-18 | 21 |
cerebral hemisphere | 3.24e-18 | 21 |
pallium | 3.24e-18 | 21 |
brain grey matter | 1.37e-12 | 29 |
regional part of telencephalon | 1.37e-12 | 29 |
telencephalon | 1.37e-12 | 29 |
gray matter | 2.03e-10 | 34 |
regional part of forebrain | 8.29e-09 | 39 |
forebrain | 8.29e-09 | 39 |
future forebrain | 8.29e-09 | 39 |
anterior neural tube | 1.56e-08 | 40 |
regional part of brain | 3.82e-07 | 46 |
brain | 6.00e-07 | 47 |
future brain | 6.00e-07 | 47 |