FFCP PHASE1:Hg19::chr4:155488898..155488948,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:155488898..155488948,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr4:155488898..155488948,+ | |||
|id=chr4:155488898..155488948,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.93e-24!12;CL:0000417!6.93e-24!12;CL:0000668!6.93e-24!12;CL:0000414!6.93e-24!12;CL:0000412!6.93e-24!12;CL:0000182!6.93e-24!12;CL:0000223!9.55e-10!59;CL:0002563!6.73e-09!4;CL:0002322!4.03e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.65e-13;12!CL:0002231;9.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.65e-13,12;CL:0000223,3.11e-07,58;CL:0002231,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.31e-09;31!UBERON:0003918;1.91e-07;10!UBERON:0007687;1.91e-07;10!UBERON:0004161;5.47e-07;11!CL:0000223;9.40e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.86e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002107!2.24e-26!19;UBERON:0006925!2.24e-26!19;UBERON:0008836!2.24e-26!19;UBERON:0008835!1.22e-22!22;UBERON:0003894!1.22e-22!22;UBERON:0009854!1.30e-21!23;UBERON:0007499!8.40e-20!25;UBERON:0009497!8.40e-20!25;UBERON:0000015!8.40e-20!25;UBERON:0002423!8.40e-20!25;UBERON:0006235!8.40e-20!25;UBERON:0004161!8.40e-20!25;UBERON:0005057!5.31e-19!26;UBERON:0009856!5.31e-19!26;UBERON:0003929!2.66e-16!54;UBERON:0005172!5.52e-16!55;UBERON:0005173!5.52e-16!55;UBERON:0002365!9.09e-16!31;UBERON:0002330!9.09e-16!31;UBERON:0002417!3.13e-14!61;UBERON:0000916!3.13e-14!61;UBERON:0002368!7.61e-14!35;UBERON:0000949!1.57e-10!45;UBERON:0005911!4.19e-10!82;UBERON:0002530!7.62e-10!59;UBERON:0002146!4.50e-09!1;UBERON:0005623!4.50e-09!1;UBERON:0001242!6.73e-09!4;UBERON:0001262!6.73e-09!4;UBERON:0004786!6.73e-09!4;UBERON:0004808!6.73e-09!4;UBERON:0001277!6.73e-09!4;UBERON:0005177!2.54e-07!107;UBERON:0003350!2.76e-07!5;UBERON:0004921!7.02e-07!129;UBERON:0004185!7.02e-07!129;UBERON:0009569!7.78e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.19e-22;19!UBERON:0006925;4.19e-22;19!UBERON:0002423;7.82e-17;25!UBERON:0002365;1.43e-13;31!UBERON:0002330;1.43e-13;31!UBERON:0002368;9.01e-12;33!UBERON:0005172;2.21e-11;52!UBERON:0005173;2.21e-11;52!UBERON:0000949;1.27e-08;43!UBERON:0002417;1.22e-07;58!UBERON:0000916;1.22e-07;58!UBERON:0002530;9.21e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.19e-22,19;UBERON:0006925,4.19e-22,19;UBERON:0008836,4.19e-22,19;UBERON:0008835,4.12e-19,22;UBERON:0003894,4.12e-19,22;UBERON:0009854,2.76e-18,23;UBERON:0007499,7.82e-17,25;UBERON:0009497,7.82e-17,25;UBERON:0000015,7.82e-17,25;UBERON:0002423,7.82e-17,25;UBERON:0006235,7.82e-17,25;UBERON:0004161,7.82e-17,25;UBERON:0009856,3.44e-16,26;UBERON:0003929,9.57e-15,54;UBERON:0005172,1.09e-14,54;UBERON:0005173,1.09e-14,54;UBERON:0002365,1.36e-13,31;UBERON:0002330,1.36e-13,31;UBERON:0002417,3.48e-13,60;UBERON:0000916,3.48e-13,60;UBERON:0002368,4.78e-12,35;UBERON:0002530,5.14e-10,59;UBERON:0005911,1.42e-09,82;UBERON:0000949,2.25e-09,45;UBERON:0005177,1.17e-07,101;UBERON:0009569,7.40e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,362.519399590436,311.556227686807,174.283022471014,0,5.411491295897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29632954224082,0,0,0,0,0,0,0,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,21.3294894110785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2409171670075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.472699093843342,0.576911008668165,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,1.41850273138557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,128.526308935678,17.2258955585888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:155488898..155488948,+ | |||
}} |
Latest revision as of 02:29, 30 July 2015
Short description: | p@chr4:155488898..155488948, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:155488898..155488948, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.65e-13 | 12 |
endodermal cell | 3.11e-07 | 58 |
epithelial cell of prostate | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.19e-22 | 19 |
digestive gland | 4.19e-22 | 19 |
liver bud | 4.19e-22 | 19 |
hepatic diverticulum | 4.12e-19 | 22 |
liver primordium | 4.12e-19 | 22 |
digestive tract diverticulum | 2.76e-18 | 23 |
epithelial sac | 7.82e-17 | 25 |
epithelium of foregut-midgut junction | 7.82e-17 | 25 |
anatomical boundary | 7.82e-17 | 25 |
hepatobiliary system | 7.82e-17 | 25 |
foregut-midgut junction | 7.82e-17 | 25 |
septum transversum | 7.82e-17 | 25 |
sac | 3.44e-16 | 26 |
gut epithelium | 9.57e-15 | 54 |
abdomen element | 1.09e-14 | 54 |
abdominal segment element | 1.09e-14 | 54 |
exocrine gland | 1.36e-13 | 31 |
exocrine system | 1.36e-13 | 31 |
abdominal segment of trunk | 3.48e-13 | 60 |
abdomen | 3.48e-13 | 60 |
endocrine gland | 4.78e-12 | 35 |
gland | 5.14e-10 | 59 |
endo-epithelium | 1.42e-09 | 82 |
endocrine system | 2.25e-09 | 45 |
trunk region element | 1.17e-07 | 101 |
subdivision of trunk | 7.40e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.71e-09 | 2 |