FFCP PHASE1:Mm9::chr15:85662749..85662781,+: Difference between revisions
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{{FFCP|EntrezGene=239570|HGNC=|MCL_coexpression_id=8|UniProt=D6RH59|association_with_transcript=0bp_to_ENSMUST00000124011,ENSMUST00000133158_5end|description=CAGE_peak_1_at_Ttc38_5end|id=chr15:85662749..85662781,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.51e-18!128;UBERON:0001555!3.51e-18!128;UBERON:0007026!3.51e-18!128;UBERON:0004119!5.32e-18!130;UBERON:0000925!5.32e-18!130;UBERON:0006595!5.32e-18!130;UBERON:0004921!1.51e-17!126;UBERON:0004185!1.51e-17!126;UBERON:0005409!1.43e-10!59;UBERON:0002365!1.63e-10!25;UBERON:0002330!1.63e-10!25;UBERON:0009854!4.49e-10!23;UBERON:0009856!4.49e-10!23;UBERON:0000160!5.41e-10!43;UBERON:0002107!1.86e-09!22;UBERON:0007499!1.86e-09!22;UBERON:0006925!1.86e-09!22;UBERON:0009497!1.86e-09!22;UBERON:0000015!1.86e-09!22;UBERON:0002423!1.86e-09!22;UBERON:0006235!1.86e-09!22;UBERON:0008835!1.86e-09!22;UBERON:0003894!1.86e-09!22;UBERON:0004161!1.86e-09!22;UBERON:0008836!1.86e-09!22;UBERON:0000077!4.90e-09!97;UBERON:0003104!1.07e-08!131;UBERON:0009142!1.07e-08!131;UBERON:0001041!2.32e-08!92;UBERON:0000466!3.97e-08!79;UBERON:0005911!6.64e-08!69;UBERON:0005256!1.32e-07!47;UBERON:0005172!2.84e-07!49;UBERON:0005173!2.84e-07!49;UBERON:0002417!2.84e-07!49;UBERON:0000916!2.84e-07!49;UBERON:0000481!2.98e-07!230;UBERON:0003929!5.52e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.71e-15,116;UBERON:0001555,1.71e-15,116;UBERON:0007026,1.71e-15,116;UBERON:0004119,2.61e-15,118;UBERON:0000925,2.61e-15,118;UBERON:0006595,2.61e-15,118;UBERON:0004921,6.58e-15,114;UBERON:0002365,1.63e-10,25;UBERON:0002330,1.63e-10,25;UBERON:0009854,4.49e-10,23;UBERON:0009856,4.49e-10,23;UBERON:0002107,1.86e-09,22;UBERON:0007499,1.86e-09,22;UBERON:0006925,1.86e-09,22;UBERON:0009497,1.86e-09,22;UBERON:0000015,1.86e-09,22;UBERON:0002423,1.86e-09,22;UBERON:0006235,1.86e-09,22;UBERON:0008835,1.86e-09,22;UBERON:0003894,1.86e-09,22;UBERON:0004161,1.86e-09,22;UBERON:0008836,1.86e-09,22;UBERON:0002100,2.31e-09,90;UBERON:0005177,5.17e-09,79;UBERON:0005256,1.09e-08,45;UBERON:0005409,1.29e-08,47;UBERON:0000160,3.20e-08,31;UBERON:0005911,6.47e-08,69;UBERON:0005172,2.84e-07,49;UBERON:0005173,2.84e-07,49;UBERON:0002417,2.84e-07,49;UBERON:0000916,2.84e-07,49;UBERON:0003929,5.38e-07,55|phase1_expression=3.52327463630547,8.72438519098403,16.8349718574128,13.3084252975005,21.5385163876929,9.23335995515394,8.41005506143892,14.0744422551318,2.111830832275,1.87251621057595,1.02730780935303,0.8774937489487,20.5440875917447,13.8124235822016,2.33176833270964,3.44207954562704,1.39912375625629,17.192688012024,18.2362196695633,9.76096199135469,6.4632900514813,0.695036658406197,0,13.759348360233,12.3881011776272,12.6331032105304,14.2151458732495,11.2045040996662,26.7933021433487,15.6258680451157,12.6386391073524,5.08024538767705,4.30545351309199,0,9.24325183204079,6.81562045969819,11.0251452381679,15.9042019680025,10.9386948233332,13.6116173433188,9.41170380849623,12.294818729252,8.25367600152961,6.92432498865675,7.60326984146359,5.68994931701213,9.38869613217647,5.23260375313072,8.34807494390993,5.8328969722285,9.79904951377538,4.31257693094915,7.88578248471361,13.0565185562042,10.0828139742739,4.63066984864705,7.16333599846892,5.67239301505187,3.03474691289397,2.64495489636016,1.90149421051854,6.77689064138264,11.5608323494448,8.99899717281399,4.94433181283487,7.8152812644071,6.5912024314049,6.14749288514487,2.17748185847803,2.70011876663381,2.73422449756797,2.85650984403804,3.3130281142742,1.83736198822431,2.77951865952885,0.919218786610021,8.8092704799511,3.95830748064082,3.37934373163736,2.90149833006426,2.19570344645783,4.68822033501084,4.18774498502071,5.06486349028512,4.12555268997387,1.47314292736834,2.98980529678116,2.23679334990361,0.681535739998656,1.73814588245607,9.56552812715537,41.3003460951065,3.39985666853875,38.318926606285,69.5260766669006,69.444167500087,18.2577746171277,2.04516387093669,2.07828803682295,0.70667914902068,3.52108549441701,5.13305909657271,0,0,1.94841936910093,2.53359865475099,3.53867111510348,22.836775943812,14.5005214842416,11.2816025689267,3.81667718885499,7.30717147949139,6.22661842591358,4.37095657602605,9.99504010653491,11.8126595849895,29.1690061926561,37.1620347284173,3.5384422077995,3.88240439873782,5.74187947997023,3.87900202508178,54.0536107532554,3.51336956413857,4.39838084308256,21.4583926375217,6.35020159881377,1.79970819298022,5.08280908292259,5.99162557619291,3.66000482254901,3.26701315493447,5.21472960576829,5.8814555185976,5.40248915854856,7.30085683804909,4.58277137326423,10.4501855312478,32.3485130795104,91.9630910223891,3.513251959993,3.90833577536904,3.60124259610698,4.06903008156431,4.83059143974428,3.97152532883034,4.12287588062807,30.2682943764648,3.66465587985832,5.8622884852024,4.75068035242662,3.5071317188412,6.11703948296315,4.52727816478817,6.1734640922383,8.35943920637671,2.80885274925294,3.60287069960601,4.54661599032948,2.27838349789052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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239570 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=D6RH59 | |||
|association_with_transcript=0bp_to_ENSMUST00000124011,ENSMUST00000133158_5end | |||
|cluster_id=chr15:85662749..85662781,+ | |||
|description=CAGE_peak_1_at_Ttc38_5end | |||
|id=chr15:85662749..85662781,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.51e-18!128;UBERON:0001555!3.51e-18!128;UBERON:0007026!3.51e-18!128;UBERON:0004119!5.32e-18!130;UBERON:0000925!5.32e-18!130;UBERON:0006595!5.32e-18!130;UBERON:0004921!1.51e-17!126;UBERON:0004185!1.51e-17!126;UBERON:0005409!1.43e-10!59;UBERON:0002365!1.63e-10!25;UBERON:0002330!1.63e-10!25;UBERON:0009854!4.49e-10!23;UBERON:0009856!4.49e-10!23;UBERON:0000160!5.41e-10!43;UBERON:0002107!1.86e-09!22;UBERON:0007499!1.86e-09!22;UBERON:0006925!1.86e-09!22;UBERON:0009497!1.86e-09!22;UBERON:0000015!1.86e-09!22;UBERON:0002423!1.86e-09!22;UBERON:0006235!1.86e-09!22;UBERON:0008835!1.86e-09!22;UBERON:0003894!1.86e-09!22;UBERON:0004161!1.86e-09!22;UBERON:0008836!1.86e-09!22;UBERON:0000077!4.90e-09!97;UBERON:0003104!1.07e-08!131;UBERON:0009142!1.07e-08!131;UBERON:0001041!2.32e-08!92;UBERON:0000466!3.97e-08!79;UBERON:0005911!6.64e-08!69;UBERON:0005256!1.32e-07!47;UBERON:0005172!2.84e-07!49;UBERON:0005173!2.84e-07!49;UBERON:0002417!2.84e-07!49;UBERON:0000916!2.84e-07!49;UBERON:0000481!2.98e-07!230;UBERON:0003929!5.52e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.71e-15,116;UBERON:0001555,1.71e-15,116;UBERON:0007026,1.71e-15,116;UBERON:0004119,2.61e-15,118;UBERON:0000925,2.61e-15,118;UBERON:0006595,2.61e-15,118;UBERON:0004921,6.58e-15,114;UBERON:0002365,1.63e-10,25;UBERON:0002330,1.63e-10,25;UBERON:0009854,4.49e-10,23;UBERON:0009856,4.49e-10,23;UBERON:0002107,1.86e-09,22;UBERON:0007499,1.86e-09,22;UBERON:0006925,1.86e-09,22;UBERON:0009497,1.86e-09,22;UBERON:0000015,1.86e-09,22;UBERON:0002423,1.86e-09,22;UBERON:0006235,1.86e-09,22;UBERON:0008835,1.86e-09,22;UBERON:0003894,1.86e-09,22;UBERON:0004161,1.86e-09,22;UBERON:0008836,1.86e-09,22;UBERON:0002100,2.31e-09,90;UBERON:0005177,5.17e-09,79;UBERON:0005256,1.09e-08,45;UBERON:0005409,1.29e-08,47;UBERON:0000160,3.20e-08,31;UBERON:0005911,6.47e-08,69;UBERON:0005172,2.84e-07,49;UBERON:0005173,2.84e-07,49;UBERON:0002417,2.84e-07,49;UBERON:0000916,2.84e-07,49;UBERON:0003929,5.38e-07,55 | |||
|phase1_expression=3.52327463630547,8.72438519098403,16.8349718574128,13.3084252975005,21.5385163876929,9.23335995515394,8.41005506143892,14.0744422551318,2.111830832275,1.87251621057595,1.02730780935303,0.8774937489487,20.5440875917447,13.8124235822016,2.33176833270964,3.44207954562704,1.39912375625629,17.192688012024,18.2362196695633,9.76096199135469,6.4632900514813,0.695036658406197,0,13.759348360233,12.3881011776272,12.6331032105304,14.2151458732495,11.2045040996662,26.7933021433487,15.6258680451157,12.6386391073524,5.08024538767705,4.30545351309199,0,9.24325183204079,6.81562045969819,11.0251452381679,15.9042019680025,10.9386948233332,13.6116173433188,9.41170380849623,12.294818729252,8.25367600152961,6.92432498865675,7.60326984146359,5.68994931701213,9.38869613217647,5.23260375313072,8.34807494390993,5.8328969722285,9.79904951377538,4.31257693094915,7.88578248471361,13.0565185562042,10.0828139742739,4.63066984864705,7.16333599846892,5.67239301505187,3.03474691289397,2.64495489636016,1.90149421051854,6.77689064138264,11.5608323494448,8.99899717281399,4.94433181283487,7.8152812644071,6.5912024314049,6.14749288514487,2.17748185847803,2.70011876663381,2.73422449756797,2.85650984403804,3.3130281142742,1.83736198822431,2.77951865952885,0.919218786610021,8.8092704799511,3.95830748064082,3.37934373163736,2.90149833006426,2.19570344645783,4.68822033501084,4.18774498502071,5.06486349028512,4.12555268997387,1.47314292736834,2.98980529678116,2.23679334990361,0.681535739998656,1.73814588245607,9.56552812715537,41.3003460951065,3.39985666853875,38.318926606285,69.5260766669006,69.444167500087,18.2577746171277,2.04516387093669,2.07828803682295,0.70667914902068,3.52108549441701,5.13305909657271,0,0,1.94841936910093,2.53359865475099,3.53867111510348,22.836775943812,14.5005214842416,11.2816025689267,3.81667718885499,7.30717147949139,6.22661842591358,4.37095657602605,9.99504010653491,11.8126595849895,29.1690061926561,37.1620347284173,3.5384422077995,3.88240439873782,5.74187947997023,3.87900202508178,54.0536107532554,3.51336956413857,4.39838084308256,21.4583926375217,6.35020159881377,1.79970819298022,5.08280908292259,5.99162557619291,3.66000482254901,3.26701315493447,5.21472960576829,5.8814555185976,5.40248915854856,7.30085683804909,4.58277137326423,10.4501855312478,32.3485130795104,91.9630910223891,3.513251959993,3.90833577536904,3.60124259610698,4.06903008156431,4.83059143974428,3.97152532883034,4.12287588062807,30.2682943764648,3.66465587985832,5.8622884852024,4.75068035242662,3.5071317188412,6.11703948296315,4.52727816478817,6.1734640922383,8.35943920637671,2.80885274925294,3.60287069960601,4.54661599032948,2.27838349789052,2.34526059981096,3.6012412292203,4.97163944728941,2.75469924446365,4.62801338662135,6.27841650826101,5.633741429392,7.58974725386602,5.59503489705834,8.37254066803386,13.7006288132496,12.5731989185786,10.9775057645525,17.9836601138898,3.99550902271842,4.11618449517138,13.5471701023357,27.2384083663451,3.83918850963421,6.50262681209228,5.54130083685001,14.722897297504,14.6769508937614,17.5007576023554,16.1339880925134,18.2815839743652,19.3528110776208,19.6966907320739,14.8172706210531,19.7740269903929,25.5042898852139,24.6935178835415,3.41402221715547,3.88444942873078,5.63538678365402,6.10953983535943,8.92181440971078,10.1696938840962,13.2164362589698,21.2558613090627,23.5498091762062,31.4662768000591,77.670588296833,5.83957870006329,8.45203678986773,11.0182435068578,19.2717115319078,17.8471098216788,21.6431974014207,16.1109836972454,53.1803543822116,58.2070195958733,43.1304619582064,72.1953438476897,92.9872265881391,94.2119214742727,88.8017196933465,124.470428511749,18.1058126363273,3.03186258832776,2.93336957595647,3.39490171550376,4.92849521405854,9.5478566741835,18.3293603482231,14.0496226457615,12.6108115284953,12.8449519996289,11.799652880654,17.0417847304368,17.0958132047237,23.7224456073679,7.53956419696361,4.35124547054968,21.6376280128376,13.7968373152366,5.29816946959713,7.97039468826982,0.655739781506702,8.83648245215305,2.2085575359138,1.95219372148319,3.44677436372478,3.34556317133573,4.90157082981267,3.67999490025482,2.83367491172426,1.75353514746787,2.76701444562566,5.46246237917072,10.5035663054119,13.1768546713769,8.63300884573953,14.0224604526655,22.5666735177937,6.79785781233948,9.97667737983678,11.5049098651098,10.6308681437078,8.9156192903739,9.04499026088774,5.81653967164009,10.3384239731569,19.2782422340848,28.4630243152497,16.5016869197099,10.2131881726136,3.96134406868882,4.78627129996192,7.50179622610573,5.49754724291048,6.42127743367454,8.22745103010605,14.6143175575008,4.92810586933792,9.32061111800809,29.5508053393649,5.7710188529518,5.8127193610526,4.22190474497091,6.44610657616937,6.23735419031233,22.4440244204985,6.30446026835733,7.00570611271196,5.15967169908056,5.18544676635193,6.2161590811548,7.79157098009843,6.17701067657611,9.5187920796559,7.97723278244851,7.18639863783004,18.1387417422872,3.95419991976419,5.48962561242491,7.45236851670429,13.1725626489115,17.250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| |||
|short_description=p1@Ttc38 | |||
}} |
Latest revision as of 06:31, 27 September 2015
Short description: | p1@Ttc38 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ttc38_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000124011, ENSMUST00000133158_5end |
EntrezGene: | Ttc38 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.71e-15 | 116 |
digestive tract | 1.71e-15 | 116 |
primitive gut | 1.71e-15 | 116 |
endoderm-derived structure | 2.61e-15 | 118 |
endoderm | 2.61e-15 | 118 |
presumptive endoderm | 2.61e-15 | 118 |
subdivision of digestive tract | 6.58e-15 | 114 |
exocrine gland | 1.63e-10 | 25 |
exocrine system | 1.63e-10 | 25 |
digestive tract diverticulum | 4.49e-10 | 23 |
sac | 4.49e-10 | 23 |
liver | 1.86e-09 | 22 |
epithelial sac | 1.86e-09 | 22 |
digestive gland | 1.86e-09 | 22 |
epithelium of foregut-midgut junction | 1.86e-09 | 22 |
anatomical boundary | 1.86e-09 | 22 |
hepatobiliary system | 1.86e-09 | 22 |
foregut-midgut junction | 1.86e-09 | 22 |
hepatic diverticulum | 1.86e-09 | 22 |
liver primordium | 1.86e-09 | 22 |
septum transversum | 1.86e-09 | 22 |
liver bud | 1.86e-09 | 22 |
trunk | 2.31e-09 | 90 |
trunk region element | 5.17e-09 | 79 |
trunk mesenchyme | 1.09e-08 | 45 |
gastrointestinal system | 1.29e-08 | 47 |
intestine | 3.20e-08 | 31 |
endo-epithelium | 6.47e-08 | 69 |
abdomen element | 2.84e-07 | 49 |
abdominal segment element | 2.84e-07 | 49 |
abdominal segment of trunk | 2.84e-07 | 49 |
abdomen | 2.84e-07 | 49 |
gut epithelium | 5.38e-07 | 55 |