FFCP PHASE1:Hg19::chr4:77908859..77908883,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25589 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-57bp_to_ENST00000512333_5end | |||
|cluster_id=chr4:77908859..77908883,+ | |||
|coexpression_cluster_id=C4426 | |||
|description=CAGE_peak_5_at_SEPT11_5end | |||
|id=chr4:77908859..77908883,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.91e-38!180;CL:0000057!1.45e-21!75;CL:0000048!8.68e-18!430;CL:0000723!5.07e-17!436;CL:0000034!4.90e-16!444;CL:0000680!1.24e-15!57;CL:0000056!1.24e-15!57;CL:0000355!1.24e-15!57;CL:0000187!5.76e-14!54;CL:0002371!1.34e-13!591;CL:0000192!3.12e-13!42;CL:0000514!3.12e-13!42;CL:0000144!5.29e-12!625;CL:0000183!6.01e-12!59;CL:0000393!1.37e-11!60;CL:0000211!1.37e-11!60;CL:0002334!3.26e-11!12;CL:0000359!3.84e-11!32;CL:0002620!4.81e-09!23;CL:0000219!6.41e-09!390;CL:0000548!1.01e-08!679;CL:0000004!1.01e-08!679;CL:0000255!1.01e-08!679;CL:0000012!1.72e-08!682;CL:0002494!5.24e-08!16;CL:0000134!8.15e-08!358;CL:0002320!3.19e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.37e-12;12!CL:1000306;2.61e-11;4!CL:0002547;2.61e-11;4!CL:0002579;6.28e-09;3!CL:0002620;9.50e-09;23!CL:0002580;2.09e-08;3!CL:0000135;1.79e-07;3!CL:0000388;1.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.64e-19,76;CL:0002334,1.44e-12,12;CL:1000306,2.79e-11,4;CL:0002547,2.79e-11,4;CL:0000048,5.60e-11,427;CL:0000723,1.34e-10,433;CL:0000034,4.15e-10,441;CL:0002579,6.22e-09,3;CL:0002620,9.36e-09,23;CL:0002580,1.67e-08,3;CL:0000135,1.62e-07,3;CL:0000388,1.62e-07,3;CL:0000134,2.41e-07,354;CL:0002320,5.83e-07,361;CL:0000136,7.55e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.81e-08;5!DOID:450;5.81e-08;5!DOID:66;5.81e-08;5!DOID:423;5.81e-08;5!DOID:0080000;5.81e-08;5!DOID:11722;5.81e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.46e-08,5;DOID:450,5.46e-08,5;DOID:66,5.46e-08,5;DOID:423,5.46e-08,5;DOID:0080000,5.46e-08,5;DOID:11722,5.46e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!6.84e-14!61;UBERON:0002036!6.84e-14!61;UBERON:0003082!6.84e-14!61;UBERON:0002385!4.12e-13!63;UBERON:0001015!4.12e-13!63;UBERON:0000383!4.12e-13!63;UBERON:0000914!1.58e-12!83;UBERON:0002329!1.58e-12!83;UBERON:0003077!1.58e-12!83;UBERON:0003059!1.58e-12!83;UBERON:0007282!1.58e-12!83;UBERON:0009618!1.58e-12!83;UBERON:0007285!1.58e-12!83;UBERON:0004290!2.32e-12!70;UBERON:0004872!2.66e-11!84;UBERON:0000486!1.39e-10!82;UBERON:0001637!1.86e-08!42;UBERON:0003509!1.86e-08!42;UBERON:0004572!1.86e-08!42;UBERON:0004573!3.85e-08!33;UBERON:0004571!3.85e-08!33;UBERON:0002384!6.51e-08!375;UBERON:0005256!3.39e-07!143;UBERON:0004535!5.41e-07!110;UBERON:0001981!9.44e-07!60;UBERON:0007500!9.44e-07!60;UBERON:0004537!9.44e-07!60;UBERON:0006965!9.44e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.61e-11;4!UBERON:0000415;2.61e-11;4!UBERON:0007240;2.61e-11;4!UBERON:0005742;2.61e-11;4!UBERON:0005734;2.61e-11;4!UBERON:0004664;2.61e-11;4!UBERON:0004663;2.61e-11;4!UBERON:0003688;4.02e-11;6!UBERON:0002358;4.02e-11;6!UBERON:0003684;4.02e-11;6!UBERON:0001178;4.02e-11;6!UBERON:0004457;4.01e-10;9!UBERON:0000042;4.01e-10;9!UBERON:0000947;3.79e-08;21!UBERON:0010191;3.79e-08;21!UBERON:0007846;1.79e-07;3!UBERON:0000043;1.79e-07;3!UBERON:0007845;1.79e-07;3!UBERON:0004573;2.60e-07;33!UBERON:0004571;2.60e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.79e-11,4;UBERON:0007240,2.79e-11,4;UBERON:0005742,2.79e-11,4;UBERON:0005734,2.79e-11,4;UBERON:0004664,2.79e-11,4;UBERON:0004663,2.79e-11,4;UBERON:0003688,4.38e-11,6;UBERON:0002358,4.38e-11,6;UBERON:0003684,4.38e-11,6;UBERON:0001178,4.38e-11,6;UBERON:0000947,3.51e-08,21;UBERON:0010191,3.51e-08,21;UBERON:0004573,3.79e-08,33;UBERON:0004571,3.79e-08,33;UBERON:0007846,1.62e-07,3;UBERON:0000043,1.62e-07,3;UBERON:0007845,1.62e-07,3;UBERON:0002384,1.88e-07,371;UBERON:0004457,2.42e-07,12;UBERON:0000042,2.42e-07,12;UBERON:0001637,7.18e-07,42;UBERON:0003509,7.18e-07,42;UBERON:0004572,7.18e-07,42 | |||
|phase1_expression=2.36181893051724,1.07050261945492,5.21531295155093,0,3.12872766099101,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,2.01697543935533,1.80808358407193,2.92124036154949,0,0,0.204000691244253,0,0.85870796139317,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.722878304769133,1.00267582127178,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8607097779847,8.1043527465331,18.4048761330374,8.60509862246441,3.19201543978521,1.68203280042692,0,2.4666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0.718618141816238,0,0,0.554128230968366,0.877955241761676,0.30648779579902,0.150238058906597,1.24775401476023,1.25572744982203,2.56268866582281,6.14602513362729,0,2.57631323096097,5.92573242104947,5.3973888336161,0.675105328965065,3.50773218580315,1.26216887122057,6.25939310767636,0.646584227275248,0.710019185033229,2.31729825923573,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,1.32969058292435,2.08014873822732,0,0,0,0.857867961948885,0,0,0,1.42156779497018,0,0,0,0,0,0,0,10.7831184971212,6.89171615004683,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,5.17444067511769,5.04647728108591,1.28855556491985,0.902838299183157,0,0,3.32112799267718,1.84369168541703,0.868836144680828,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,11.4129591596637,3.99001130548962,2.52594084989766,13.9671672688714,4.09365799253363,8.68611174175481,4.45254199334973,0.154209693802656,1.06537035187876,0.328508624055237,0,0.116210378459959,0,0,0,3.67406234126742,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,8.03419649220798,0.386682873168488,0,0,0.275673144969061,0.214840489736547,0,0.170453254832202,1.4245125703478,0,0,0,0,2.32422774648643,6.61105928344344,0,0,0.532306030317022,0.869932992075073,0.37064843820784,2.00374841438788,0,3.79655309662471,0.953150969619124,0,0,0.636406495851874,0,1.61885211824983,0.274537029736055,0.353437207037059,1.2130948894399,3.17020642346017,0,0.48763373908959,0.731140468893853,0,1.22849920267187,2.82810863907426,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0.563391205064483,0.573645408816206,2.45622602532803,0.35667105148125,0,0.422215270595328,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715880777515084,0.246169610922139,15.5519793830904,0,0,0,0.690503839458535,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67952103036807,0.836822770498666,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,4.32359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,6.07654605602784,0,0.189403005275089,1.0062716070103,0.889811221596536,3.43260102595385,0.302461847526478,1.5543720058278,0.73927574994817,0.63718706865481,0.449803112163605,0.776314784381297,2.07353103920428,2.12673371646396,0,0,0,0.813741466409323,0.363697318405119,1.18151612746737,0,1.59238355479446,0,3.09056134664514,2.35724642136143,6.30924491143255,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4941435715628,0,0,1.76337971845342,1.8374728641192,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,4.57658514560601,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,4.07825075250761,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,1.84870251452567,3.46101249699031,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p5@SEPT11 | |||
}} |
Latest revision as of 18:34, 18 September 2015
Short description: | p5@SEPT11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEPT11_5end |
Coexpression cluster: | C4426_Ewing_Preadipocyte_Fibroblast_basal_neurofibroma_Multipotent_Adipocyte |
Association with transcript: | -57bp_to_ENST00000512333_5end |
EntrezGene: | SEPT11 |
HGNC: | 25589 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.64e-19 | 76 |
preadipocyte | 1.44e-12 | 12 |
fibroblast of tunica adventitia of artery | 2.79e-11 | 4 |
fibroblast of the aortic adventitia | 2.79e-11 | 4 |
multi fate stem cell | 5.60e-11 | 427 |
somatic stem cell | 1.34e-10 | 433 |
stem cell | 4.15e-10 | 441 |
omentum preadipocyte | 6.22e-09 | 3 |
skin fibroblast | 9.36e-09 | 23 |
preadipocyte of the breast | 1.67e-08 | 3 |
fibrocyte | 1.62e-07 | 3 |
tendon cell | 1.62e-07 | 3 |
mesenchymal cell | 2.41e-07 | 354 |
connective tissue cell | 5.83e-07 | 361 |
fat cell | 7.55e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.79e-11 | 4 |
tunica adventitia of artery | 2.79e-11 | 4 |
adventitia | 2.79e-11 | 4 |
tunica adventitia of blood vessel | 2.79e-11 | 4 |
aorta tunica adventitia | 2.79e-11 | 4 |
aorta wall | 2.79e-11 | 4 |
omentum | 4.38e-11 | 6 |
peritoneum | 4.38e-11 | 6 |
abdominal cavity | 4.38e-11 | 6 |
visceral peritoneum | 4.38e-11 | 6 |
aorta | 3.51e-08 | 21 |
aortic system | 3.51e-08 | 21 |
systemic artery | 3.79e-08 | 33 |
systemic arterial system | 3.79e-08 | 33 |
dense regular connective tissue | 1.62e-07 | 3 |
tendon | 1.62e-07 | 3 |
regular connective tissue | 1.62e-07 | 3 |
connective tissue | 1.88e-07 | 371 |
cavity lining | 2.42e-07 | 12 |
serous membrane | 2.42e-07 | 12 |
artery | 7.18e-07 | 42 |
arterial blood vessel | 7.18e-07 | 42 |
arterial system | 7.18e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.46e-08 | 5 |
myotonic disease | 5.46e-08 | 5 |
muscle tissue disease | 5.46e-08 | 5 |
myopathy | 5.46e-08 | 5 |
muscular disease | 5.46e-08 | 5 |
myotonic dystrophy | 5.46e-08 | 5 |