FFCP PHASE1:Mm9::chr16:11009028..11009039,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100043147|HGNC=|MCL_coexpression_id=26|UniProt=|association_with_transcript=37bp_to_ENSMUST00000153144,NR_040518,uc007yeo.1_5end|description=CAGE_peak_4_at_Gm4262_5end|id=chr16:11009028..11009039,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,3.07e-86,1;CL:0002078,3.07e-86,1;CL:0000115,3.07e-86,1;CL:0002262,3.07e-86,1;CL:1000398,3.07e-86,1;CL:0000215,5.61e-30,3;CL:0000182,1.16e-18,5;CL:0000222,8.67e-14,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.36e-07!14;UBERON:0000117!1.36e-07!14;UBERON:0000171!1.36e-07!14;UBERON:0000170!1.36e-07!14;UBERON:0005597!1.36e-07!14;UBERON:0000118!1.36e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.07e-86,1;UBERON:0001281,3.07e-86,1;UBERON:0000353,3.07e-86,1;UBERON:0003497,3.07e-86,1;UBERON:0003909,3.07e-86,1;UBERON:0003928,3.07e-86,1;UBERON:0003835,3.07e-86,1;UBERON:0003513,3.07e-86,1;UBERON:0001280,3.07e-86,1;UBERON:0004647,3.07e-86,1;UBERON:0002294,3.07e-86,1;UBERON:0001173,3.07e-86,1;UBERON:0004912,3.07e-86,1;UBERON:0005171,3.07e-86,1;UBERON:0000055,1.16e-18,5;UBERON:0007500,1.16e-18,5;UBERON:0001981,1.16e-18,5;UBERON:0002049,1.16e-18,5;UBERON:0007798,1.16e-18,5;UBERON:0004537,1.16e-18,5;UBERON:0006965,1.16e-18,5;UBERON:0000058,8.67e-14,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,16.8121403446973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p4@Gm4262}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100043147 | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENSMUST00000153144,NR_040518,uc007yeo.1_5end | |||
|cluster_id=chr16:11009028..11009039,+ | |||
|description=CAGE_peak_4_at_Gm4262_5end | |||
|id=chr16:11009028..11009039,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.07e-86,1;CL:0002078,3.07e-86,1;CL:0000115,3.07e-86,1;CL:0002262,3.07e-86,1;CL:1000398,3.07e-86,1;CL:0000215,5.61e-30,3;CL:0000182,1.16e-18,5;CL:0000222,8.67e-14,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.36e-07!14;UBERON:0000117!1.36e-07!14;UBERON:0000171!1.36e-07!14;UBERON:0000170!1.36e-07!14;UBERON:0005597!1.36e-07!14;UBERON:0000118!1.36e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.07e-86,1;UBERON:0001281,3.07e-86,1;UBERON:0000353,3.07e-86,1;UBERON:0003497,3.07e-86,1;UBERON:0003909,3.07e-86,1;UBERON:0003928,3.07e-86,1;UBERON:0003835,3.07e-86,1;UBERON:0003513,3.07e-86,1;UBERON:0001280,3.07e-86,1;UBERON:0004647,3.07e-86,1;UBERON:0002294,3.07e-86,1;UBERON:0001173,3.07e-86,1;UBERON:0004912,3.07e-86,1;UBERON:0005171,3.07e-86,1;UBERON:0000055,1.16e-18,5;UBERON:0007500,1.16e-18,5;UBERON:0001981,1.16e-18,5;UBERON:0002049,1.16e-18,5;UBERON:0007798,1.16e-18,5;UBERON:0004537,1.16e-18,5;UBERON:0006965,1.16e-18,5;UBERON:0000058,8.67e-14,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,16.8121403446973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Gm4262 | |||
}} |
Latest revision as of 14:58, 1 October 2015
Short description: | p4@Gm4262 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gm4262_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | 37bp_to_ENSMUST00000153144, NR_040518, uc007yeo.1_5end |
EntrezGene: | Gm4262 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.07e-86 | 1 |
meso-epithelial cell | 3.07e-86 | 1 |
endothelial cell | 3.07e-86 | 1 |
endothelial cell of sinusoid | 3.07e-86 | 1 |
endothelial cell of hepatic sinusoid | 3.07e-86 | 1 |
barrier cell | 5.61e-30 | 3 |
hepatocyte | 1.16e-18 | 5 |
mesodermal cell | 8.67e-14 | 7 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.07e-86 | 1 |
hepatic sinusoid | 3.07e-86 | 1 |
parenchyma | 3.07e-86 | 1 |
abdomen blood vessel | 3.07e-86 | 1 |
sinusoid | 3.07e-86 | 1 |
digestive system duct | 3.07e-86 | 1 |
abdominal segment blood vessel | 3.07e-86 | 1 |
trunk blood vessel | 3.07e-86 | 1 |
liver parenchyma | 3.07e-86 | 1 |
liver lobule | 3.07e-86 | 1 |
biliary system | 3.07e-86 | 1 |
biliary tree | 3.07e-86 | 1 |
biliary bud | 3.07e-86 | 1 |
hepatic duct | 3.07e-86 | 1 |
vessel | 1.16e-18 | 5 |
epithelial tube open at both ends | 1.16e-18 | 5 |
blood vessel | 1.16e-18 | 5 |
vasculature | 1.16e-18 | 5 |
vascular system | 1.16e-18 | 5 |
blood vasculature | 1.16e-18 | 5 |
vascular cord | 1.16e-18 | 5 |
duct | 8.67e-14 | 7 |