FFCP PHASE1:Mm9::chr16:33518614..33518628,+: Difference between revisions
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{{FFCP|EntrezGene=171286|HGNC=|UniProt=Q8VI23|association_with_transcript=0bp_to_ENSMUST00000119173_5end|description=CAGE_peak_3_at_Slc12a8_5end|id=chr16:33518614..33518628,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,8.44e-08,3;CL:0000682,1.24e-07,3;CL:0002563,6.85e-07,9;CL:0002251,6.85e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.24e-28!43;UBERON:0005409!1.67e-26!59;UBERON:0001007!2.77e-13!128;UBERON:0001555!2.77e-13!128;UBERON:0007026!2.77e-13!128;UBERON:0004119!7.03e-13!130;UBERON:0000925!7.03e-13!130;UBERON:0006595!7.03e-13!130;UBERON:0004921!8.48e-12!126;UBERON:0004185!8.48e-12!126;UBERON:0000344!7.20e-11!15;UBERON:0002108!1.50e-09!16;UBERON:0001242!1.52e-08!13;UBERON:0000060!1.52e-08!13;UBERON:0001262!1.52e-08!13;UBERON:0004786!1.52e-08!13;UBERON:0000161!1.15e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.97e-25,31;UBERON:0000344,1.17e-18,15;UBERON:0005409,7.24e-17,47;UBERON:0001242,1.34e-14,13;UBERON:0001262,1.34e-14,13;UBERON:0004786,1.34e-14,13;UBERON:0004923,8.79e-11,24;UBERON:0001007,5.71e-09,116;UBERON:0001555,5.71e-09,116;UBERON:0007026,5.71e-09,116;UBERON:0000331,6.88e-09,3;UBERON:0002116,6.88e-09,3;UBERON:0001204,6.88e-09,3;UBERON:0001168,6.88e-09,3;UBERON:0004119,1.02e-08,118;UBERON:0000925,1.02e-08,118;UBERON:0006595,1.02e-08,118;UBERON:0000161,1.84e-08,5;UBERON:0004921,2.26e-07,114;UBERON:0001264,5.29e-07,12;UBERON:0003350,6.85e-07,9;UBERON:0004808,6.85e-07,9;UBERON:0001277,6.85e-07,9;UBERON:0002108,9.69e-07,4;UBERON:0007023,9.99e-07,51|phase1_expression=0,0,0,0,0,3.69334398206158,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,3.67054849707472,1.14846392823004,2.15380998079537,1.72376986148711,6.46079626151671,2.77233142735924,3.99114919179548,0,0,0,2.3108129580102,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.793351699990633,0,0,0.257734922644187,0.403367049246685,0.667134131534611,0.760902504450237,2.84717436926707,1.81168850196412,1.00534083520108,1.79060824837036,1.36474860983384,1.79763881730844,3.6743468478698,3.18626037206988,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,2.65490276679926,0,0,0,0,0,0.258428293168221,2.90826983582004,5.34746067577082,1.26414703174326,1.05418608574999,4.12542172992747,0,0,0,0,0,0,0,0,0,0,5.29268155331909,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.495920734352016,0.785267825952089,1.29614973291793,20.5041973318685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.58711268530648,0,0,0,1.35232715822533,0,0.183151624267265,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0.661774257358546,0.231867835620421|short_description=p3@Slc12a8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=171286 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8VI23 | |||
|association_with_transcript=0bp_to_ENSMUST00000119173_5end | |||
|cluster_id=chr16:33518614..33518628,+ | |||
|description=CAGE_peak_3_at_Slc12a8_5end | |||
|id=chr16:33518614..33518628,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,8.44e-08,3;CL:0000682,1.24e-07,3;CL:0002563,6.85e-07,9;CL:0002251,6.85e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.24e-28!43;UBERON:0005409!1.67e-26!59;UBERON:0001007!2.77e-13!128;UBERON:0001555!2.77e-13!128;UBERON:0007026!2.77e-13!128;UBERON:0004119!7.03e-13!130;UBERON:0000925!7.03e-13!130;UBERON:0006595!7.03e-13!130;UBERON:0004921!8.48e-12!126;UBERON:0004185!8.48e-12!126;UBERON:0000344!7.20e-11!15;UBERON:0002108!1.50e-09!16;UBERON:0001242!1.52e-08!13;UBERON:0000060!1.52e-08!13;UBERON:0001262!1.52e-08!13;UBERON:0004786!1.52e-08!13;UBERON:0000161!1.15e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.97e-25,31;UBERON:0000344,1.17e-18,15;UBERON:0005409,7.24e-17,47;UBERON:0001242,1.34e-14,13;UBERON:0001262,1.34e-14,13;UBERON:0004786,1.34e-14,13;UBERON:0004923,8.79e-11,24;UBERON:0001007,5.71e-09,116;UBERON:0001555,5.71e-09,116;UBERON:0007026,5.71e-09,116;UBERON:0000331,6.88e-09,3;UBERON:0002116,6.88e-09,3;UBERON:0001204,6.88e-09,3;UBERON:0001168,6.88e-09,3;UBERON:0004119,1.02e-08,118;UBERON:0000925,1.02e-08,118;UBERON:0006595,1.02e-08,118;UBERON:0000161,1.84e-08,5;UBERON:0004921,2.26e-07,114;UBERON:0001264,5.29e-07,12;UBERON:0003350,6.85e-07,9;UBERON:0004808,6.85e-07,9;UBERON:0001277,6.85e-07,9;UBERON:0002108,9.69e-07,4;UBERON:0007023,9.99e-07,51 | |||
|phase1_expression=0,0,0,0,0,3.69334398206158,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,3.67054849707472,1.14846392823004,2.15380998079537,1.72376986148711,6.46079626151671,2.77233142735924,3.99114919179548,0,0,0,2.3108129580102,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.793351699990633,0,0,0.257734922644187,0.403367049246685,0.667134131534611,0.760902504450237,2.84717436926707,1.81168850196412,1.00534083520108,1.79060824837036,1.36474860983384,1.79763881730844,3.6743468478698,3.18626037206988,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,2.65490276679926,0,0,0,0,0,0.258428293168221,2.90826983582004,5.34746067577082,1.26414703174326,1.05418608574999,4.12542172992747,0,0,0,0,0,0,0,0,0,0,5.29268155331909,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.495920734352016,0.785267825952089,1.29614973291793,20.5041973318685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.58711268530648,0,0,0,1.35232715822533,0,0.183151624267265,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0.661774257358546,0.231867835620421 | |||
|short_description=p3@Slc12a8 | |||
}} |
Latest revision as of 22:03, 1 October 2015
Short description: | p3@Slc12a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc12a8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000119173_5end |
EntrezGene: | Slc12a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 8.44e-08 | 3 |
M cell of gut | 1.24e-07 | 3 |
intestinal epithelial cell | 6.85e-07 | 9 |
epithelial cell of alimentary canal | 6.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.97e-25 | 31 |
mucosa | 1.17e-18 | 15 |
gastrointestinal system | 7.24e-17 | 47 |
intestinal mucosa | 1.34e-14 | 13 |
wall of intestine | 1.34e-14 | 13 |
gastrointestinal system mucosa | 1.34e-14 | 13 |
organ component layer | 8.79e-11 | 24 |
digestive system | 5.71e-09 | 116 |
digestive tract | 5.71e-09 | 116 |
primitive gut | 5.71e-09 | 116 |
ileal mucosa | 6.88e-09 | 3 |
ileum | 6.88e-09 | 3 |
mucosa of small intestine | 6.88e-09 | 3 |
wall of small intestine | 6.88e-09 | 3 |
endoderm-derived structure | 1.02e-08 | 118 |
endoderm | 1.02e-08 | 118 |
presumptive endoderm | 1.02e-08 | 118 |
orifice | 1.84e-08 | 5 |
subdivision of digestive tract | 2.26e-07 | 114 |
pancreas | 5.29e-07 | 12 |
epithelium of mucosa | 6.85e-07 | 9 |
gastrointestinal system epithelium | 6.85e-07 | 9 |
intestinal epithelium | 6.85e-07 | 9 |
small intestine | 9.69e-07 | 4 |
adult organism | 9.99e-07 | 51 |