FFCP PHASE1:Hg19::chr5:10250384..10250450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1618 | |||
|TSSclassifier=strong | |||
|UniProt=E7EWW2,D6RIZ7 | |||
|association_with_transcript=0bp_to_ENST00000423695,ENST00000440011,ENST00000508451,ENST00000510326,ENST00000512975_5end | |||
|cluster_id=chr5:10250384..10250450,+ | |||
|coexpression_cluster_id=C4443 | |||
|description=CAGE_peak_1_at_CCT5_5end | |||
|id=chr5:10250384..10250450,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.73e-36!679;CL:0000004!2.73e-36!679;CL:0000255!2.73e-36!679;CL:0000012!2.28e-35!682;CL:0000003!1.34e-22!722;CL:0000063!1.76e-18!578;CL:0000066!3.07e-18!254;CL:0000144!3.12e-15!625;CL:0002321!1.74e-11!248;CL:0000220!6.06e-11!246;CL:0000055!1.27e-09!180;CL:0002371!1.41e-09!591;CL:0000076!1.42e-08!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.05e-18,253;CL:0002321,3.55e-11,250;CL:0000076,2.27e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.08e-07;29 | |||
|ontology_enrichment_disease=DOID:14566!1.04e-41!239;DOID:162!3.75e-41!235;DOID:0050687!3.40e-23!143;DOID:305!9.48e-22!106;DOID:0050686!3.11e-17!137;DOID:2531!6.85e-09!51;DOID:0060083!6.85e-09!51;DOID:1240!3.18e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:305;3.95e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.04e-41,239;DOID:162,3.75e-41,235;DOID:0050687,3.40e-23,143;DOID:305,9.48e-22,106;DOID:0050686,3.11e-17,137;DOID:2531,6.85e-09,51;DOID:0060083,6.85e-09,51;DOID:1240,3.18e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.19e-07!9;UBERON:0002199!3.32e-07!45;UBERON:0002416!3.32e-07!45;UBERON:0002097!5.31e-07!40;UBERON:0008947!7.86e-07!38;UBERON:0003258!7.86e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.19e-07;9!UBERON:0001557;1.19e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.19e-07,9;UBERON:0002199,5.52e-07,46;UBERON:0002416,5.52e-07,46;UBERON:0008947,7.86e-07,38;UBERON:0003258,7.86e-07,38;UBERON:0002097,9.13e-07,41 | |||
|phase1_expression=110.642132975769,110.261769803856,107.830119133418,103.075497303724,96.9905574907215,97.7019146992413,93.7209549222749,195.833160762318,99.7729099723383,81.5836669185009,40.4724677424008,59.634494591537,36.9273769519835,100.374512250598,70.2562436543181,158.668734562619,132.592796165275,135.837676812051,117.591804508512,52.9420549730188,36.7201244239655,23.8225588323347,137.965745797169,156.994965558598,157.430470051883,147.477873093546,168.224107782939,163.954557476394,28.3222279331211,36.4637928192352,50.6248723243569,136.99376244736,142.470399582112,141.61578589388,181.273249357906,221.07315651794,76.0425137877254,49.859586767869,41.111611731379,36.674837150979,55.5310376115012,43.7256449125622,49.712084553398,127.368857170899,151.528253419213,124.688207450538,135.73855755292,175.56868818532,196.353839147496,107.596954728484,108.868300274868,151.348627128695,117.903022811924,141.361145704858,188.242816366135,126.875336851716,215.595858545698,209.442287502819,155.184533432048,183.892332514602,188.604452110717,84.4419328477993,101.925929044654,96.7530183709216,184.863285006408,182.698042350547,187.469496947668,99.4944714416703,112.118827460343,131.833628736006,139.241885605675,188.926427261621,206.649938998898,128.443214077661,119.271012280389,116.570206902657,79.1916849582791,94.010734918783,83.0951283223904,100.609498540661,128.301256793413,141.564719167591,51.0389108937836,58.4368314050481,48.033499708632,68.7035658332077,67.2665258220501,50.5782147159945,42.967916731016,63.9216015538694,19.3532409497212,16.4426413023863,15.2909291250092,25.1125524300149,34.1910223418737,116.942533640134,19.6709770113833,18.4715058492107,23.2329693869445,79.7479583013534,34.221837996527,35.0351376243703,40.9136129656614,62.0556244850417,45.3693097511249,46.3005839679768,50.6403225240579,68.1445820940592,59.9573592251039,61.0064626079638,55.5463535749555,69.5527405764126,40.6305183064046,42.8065324943541,35.5420780936921,88.0413592760089,47.1361207130363,41.2352934579156,48.5797808677445,37.9092843045675,44.9247583160929,38.018081777935,69.1139796566977,66.9369976337608,41.2271397622741,43.3302371240551,39.4141438522102,27.8217305650131,13.9068901807424,18.3926992931155,24.3806866313962,116.701949588433,166.988505767651,111.684698086831,120.321098552613,82.127976250787,220.294207333155,47.6902172896583,124.691423839406,124.168462579036,116.644595400471,42.9611367632497,45.1726157482752,98.6286617806582,85.6805119248364,84.8011820647431,86.4226743372624,17.8867968229006,25.1677760743256,14.8583000531826,252.825782170449,141.078473597404,97.546480951734,71.2288006824252,127.527828607811,182.678379848205,180.571651087804,123.781627642109,106.374112543326,108.449478535753,126.891234889381,206.794012755435,97.868885076816,186.03751865501,115.850298547092,187.172230483431,95.8740421113745,119.030334870872,108.854812600777,209.787710764556,117.06591437153,19.7670626154095,27.1446184903828,53.2034743613892,71.5639610441259,171.964234840499,157.96415271017,128.502806095469,133.355311706582,140.169400035577,116.356405345378,108.287053755133,111.724761708516,142.793312393869,181.93309816528,57.2131076497841,79.5122775782398,62.3295008677899,161.386759721276,244.161939621024,143.022387288074,236.278211271255,242.485670663461,264.187967406929,170.877041340346,206.238818766458,95.4730218064073,109.296262869949,91.9832976916232,62.8011339737238,21.5585442544872,233.48219005429,209.823757825284,196.71552199377,116.768047154303,115.239411220431,107.870926294936,234.237458225443,177.595739331973,86.7042998603384,130.973914916609,182.155295323232,129.846186840433,155.099605107469,110.367295804633,201.687717028313,164.571101717264,173.422002905707,86.5269047237614,113.798824000444,150.524067227044,192.033499221882,211.272498018868,160.213247272373,153.55606589264,162.618205585565,212.966090902274,216.951230742271,203.223206078788,160.052668943732,186.212787946214,181.028770101612,136.11109312694,103.561791049055,147.804365847154,84.5149629018202,93.8443326170461,838.203678282294,837.191570927853,914.154836348047,820.366569183546,845.372243078536,900.916540764834,862.920372225052,858.076466993138,948.786489029799,36.1696172766078,32.2556079747925,36.6300870084946,23.5213938216867,24.0834566161479,52.0898424839142,45.4908228144681,112.131627251321,129.260848908812,179.116793951661,178.124713218199,240.539751971306,197.137314899208,175.825457356048,33.8840637522738,48.8769349081402,203.507192255635,122.886229273581,153.805389448926,140.757286567047,154.174175688011,154.866879918963,124.852294877565,132.20686896261,80.0205269784041,126.362303175188,104.339075926687,225.898539908133,179.74087717278,249.807721341085,199.088595968432,240.354267151047,192.841487620101,117.253850619235,50.4517526895785,20.5254834385364,22.482712733046,22.9761228836011,181.540479781311,129.876064689814,100.80700460064,124.882885596575,210.07656759289,142.362609418017,102.040036449116,117.961900731319,101.578696038154,293.059790140516,88.16331014680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| |||
|short_description=p1@CCT5 | |||
}} |
Latest revision as of 13:17, 19 September 2015
Short description: | p1@CCT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCT5_5end |
Coexpression cluster: | C4443_Hep2_oral_mucinous_epitheloid_cervical_epidermoid_acute |
Association with transcript: | 0bp_to_ENST00000423695, ENST00000440011, ENST00000508451, ENST00000510326, ENST00000512975_5end |
EntrezGene: | CCT5 |
HGNC: | 1618 |
UniProt: | E7EWW2D6RIZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.05e-18 | 253 |
embryonic cell | 3.55e-11 | 250 |
squamous epithelial cell | 2.27e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.19e-07 | 9 |
integument | 5.52e-07 | 46 |
integumental system | 5.52e-07 | 46 |
respiratory primordium | 7.86e-07 | 38 |
endoderm of foregut | 7.86e-07 | 38 |
skin of body | 9.13e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.04e-41 | 239 |
cancer | 3.75e-41 | 235 |
cell type cancer | 3.40e-23 | 143 |
carcinoma | 9.48e-22 | 106 |
organ system cancer | 3.11e-17 | 137 |
hematologic cancer | 6.85e-09 | 51 |
immune system cancer | 6.85e-09 | 51 |
leukemia | 3.18e-07 | 39 |