FFCP PHASE1:Hg19::chr5:137514834..137514865,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9787 | |||
|TSSclassifier=strong | |||
|UniProt=B4DL79 | |||
|association_with_transcript=0bp_to_ENST00000503417,ENST00000508792,ENST00000511638_5end | |||
|cluster_id=chr5:137514834..137514865,+ | |||
|coexpression_cluster_id=C1026 | |||
|description=CAGE_peak_2_at_KIF20A_5end | |||
|id=chr5:137514834..137514865,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.29e-26!679;CL:0000004!7.29e-26!679;CL:0000255!7.29e-26!679;CL:0000012!4.03e-25!682;CL:0000066!3.32e-20!254;CL:0000055!1.46e-18!180;CL:0002321!1.64e-15!248;CL:0000220!4.81e-15!246;CL:0000003!8.98e-15!722;CL:0000144!4.08e-11!625;CL:0000057!1.17e-10!75;CL:0000063!5.22e-10!578;CL:0000222!6.70e-09!119;CL:0000076!5.38e-08!62;CL:0002371!5.67e-07!591;CL:0002620!7.14e-07!23;CL:0000213!8.93e-07!57;CL:0000215!8.93e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.23e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-19,253;CL:0002321,3.47e-15,250;CL:0000057,1.02e-09,76;CL:0000222,4.49e-09,121;CL:0000076,1.08e-07,63;CL:0000213,2.89e-07,58;CL:0000215,2.89e-07,58;CL:0002620,5.40e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.76e-28!235;DOID:14566!1.68e-27!239;DOID:0050687!1.12e-15!143;DOID:305!5.04e-14!106;DOID:0050686!8.55e-11!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.20e-27,235;DOID:14566,1.72e-26,239;DOID:0050687,8.14e-15,143;DOID:305,6.41e-14,106;DOID:0050686,1.90e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.70e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.31e-07;9!UBERON:0001557;4.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.29e-07,9 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.140954404095971,0,0,0.872338524100369,2.53299878168311,0,0.261185628199839,8.84642171405432,10.4670175195864,14.4171305605914,3.9565046734268,8.78741106016331,2.65117900582333,2.6893005858071,4.21886169616784,5.11217063271161,2.43966399395253,23.8854852668969,9.9960338709684,4.70182082217132,27.4786547645814,33.123610867638,33.3943421322175,15.9704018013218,18.144230268438,16.6866856385,0,0,0.77408061658038,9.19421224478927,7.53014796945625,4.06729411183466,12.8595552963301,9.52533857665724,2.05520307534393,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,4.21414535640123,0,0,0,0.501559486172034,0,0,0,4.12218690475142,0,0,0.270803863765016,2.0494611156108,2.34106825607781,4.60426132890293,5.80335037350282,5.21645554323094,0,0,0,7.81834464613207,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,17.4382223522945,21.0973227041825,71.2035130197596,5.0133791063589,7.67686550492366,26.2444362526863,2.91980922181582,24.8626569141498,8.42571710357743,15.9859309961489,0.327447688744282,1.82147644146271,11.1235332835329,0,0,0,0,0,0,19.4787159219371,12.0432843314857,10.7613555498354,3.39184765154406,2.93649605346934,14.8563742647636,12.7486929587454,1.55050055501597,1.42306505074684,2.34304428935269,21.3499538067848,3.80136052859256,7.56592378399325,33.0896772311282,4.0507097394088,32.3265016388369,14.8189385933272,22.6349075771478,10.7321646226118,10.4419222552494,11.3585081236853,0,0,10.9023513035634,1.98788780678127,22.0337090296369,0.132409180813219,49.6227353895448,30.8561492512571,8.41016400213461,6.4049397437823,2.22000793575444,18.3614510885862,13.2016458628294,32.2019949133514,7.11379909931178,1.72852777344,19.9173217058727,4.37024107562449,7.41613368007784,2.69007624993242,17.1454368019897,23.6334498777472,29.6351202141744,10.2077085627447,33.4109343088009,5.26961483996404,3.56400857184616,2.96720315134268,20.9337113245746,0.718618141816238,41.9156923745625,26.1497706532405,34.0788862045545,21.5099034231611,9.50112166976961,4.5071417671979,42.3102043186878,100.81697525714,3.84403299873421,5.08636562782948,91.5277843057427,29.1638657744782,20.0959621235591,7.258557396932,92.4894300682139,42.9697192760886,89.6139898566606,4.05019554026117,7.27407255684654,50.4113621373592,59.947498445446,73.7588576550621,4.63826047591912,7.9096374971342,3.44165514466805,15.7346080907178,15.9035721985782,17.3128974875582,14.3052255921211,17.4101387104184,8.75945661781992,4.69348596989448,9.00537313470039,20.7202382028721,0,0,40.4609256136266,40.9660796889787,44.1050184686772,31.5440762014647,37.2573849398015,41.9968995826641,32.3595139584395,39.2442930250692,31.1645197126576,10.3341763647451,5.60967095213783,8.231480226628,1.47008711385542,0,0.982827216677626,1.18157981336281,12.8024298830249,13.03677448557,18.8724591328378,2.19500570817251,3.37205259772859,10.7566000480445,13.3327361028283,13.6839488230336,6.23960871167747,15.8764476227801,22.9542201850652,0.939269553886573,12.7042474029745,14.8155364024515,6.84914948044554,30.0277671224525,20.6036678902769,0.492434012174795,2.10603838625314,5.64798416697167,4.68669169933885,3.35964256397719,6.94697976487694,17.732587495164,33.4229029291056,13.4183937707824,0,6.4275356829655,0.414656231081544,0,0,6.54028311209341,8.40374536228211,21.0991404978085,3.4214489204541,2.26220483947312,7.50857644609794,6.00235508524214,35.0970294000979,38.8004461261619,34.0289646209208,0.129271715757778,3.57656445851882,12.67954128834,3.98907174877306,10.4007436911366,27.5211890460492,12.766421882095,16.5181750989982,5.57614175266775,0,23.8739697666423,16.2868092146868,4.6200953336531,23.7585561880029,0,0,3.499054691372,1.2162378064119,0.502257091432126,0,3.35474797688216,0,8.5582143024431,8.68687840005475,8.42452922456572,22.5616813682268,7.3976195035728,0,0,0,6.09827098133912,2.60279707715243,3.86644406388848,7.203199409377,7.01732626818479,0,0,0,1.34960640891054,1.50051156317903,2.98391526069709,1.66376689224646,15.1664640477587,7.7274183366628,5.97421216462837,0.601892199455438,0,4.1389228517002,45.8315662989451,10.5090426068771,23.8061103642547,1.95801157462741,1.02943027143257,0,0,0,2.42502057157008,14.9791895559447,15.4219049598137,0.496215615637554,4.14347327877769,0.561320188866147,0.768834895534206,8.18731598506726,0,1.48418066444991,20.0472601943452,12.4293207719189,24.3917653361013,9.8658341544888,16.0370322274744,10.2730532152879,0.601519410909855,0.0920809889358963,35.5924789310281,18.9374814726986,1.44236856455367,4.96319574198153,10.4740858462004,10.1965469992991,8.76835347919564,16.14939922061,7.96133688496276,17.3495579382046,21.3756756941118,3.08454505380579,11.3797503768418,3.01013864312912,18.3510916592428,8.31076008928724,10.2982387172202,31.3541623603686,27.4507223576146,38.9804190176912,12.7925711822885,1.95227036798582,0.618246069886334,9.98107166519943,11.5513299888823,5.74265537996172,0.650060246036521,36.9573038641567,2.03008508413456,24.3396815041138,26.7096394023465,22.1916881700094,31.0444507669311,21.3174540053916,27.869107165065,6.6774026735053,0.165284915360978,1.53752053892085,15.0583000743609,0.10115778085555,0,1.88887408098384,6.970372701606,4.31247012246524,6.38767236380426,2.60979897622522,2.03856641014312,2.43312307461385,14.1420180356674,12.0224181393116,2.2875623270859,3.07077349573601,0.42793898803392,9.5460974377781,1.56989728039846,12.4111995732487,11.2560182191782,17.2006107424702,5.0545620393329,0,3.37006764991185,10.2403085208814,0.487426979262569,4.22600587027022,39.0389746626839,4.80778468642623,6.78048699721457,16.5409603063837,1.99031692572366,1.31535265576129,2.89387767133344,7.87073702455959,3.04365565444056,7.74558745249375,15.7749537418055,37.2869515730534,4.81420300964294,4.63672366925625,38.3141949196246,2.74439925886963,2.96365403663912,19.7326050358172,12.9475846490644,7.50532479258994,6.03272047982209,6.53345909167936,0.941438007767792,1.72202149068492,0,1.33029046061003,1.60806380144872,0,0,0.569647187174163,0,0.411362273086194,0,0,0,10.2551108282374,0,45.5774801724719,17.4654984618176,21.2075743075374,14.1572268263344,8.76844500008523,9.97896857164083,1.7235483311913,5.29183956809707,4.22008522356922,5.61594356226918,4.56469358066384,8.30403447597023,7.51903431270201,4.9094615562465,5.62058262862948,4.237793851012,2.55507742614196,9.96165499791718,17.2054828012736,22.1439346813492,17.1854615963266,11.9186738195245,10.5794346080192,6.15436994738562,8.11367035427949,4.66300755196948,8.45922030527097,16.2812270155151,1.02555725490326,8.61659704421545,19.8369224013911,26.14052550619,0.23874448473769,16.9269868074604,0,0,0,1.8922479853894,37.2456755752477,6.75601306009579,0.19924798825107,0.828851746593443,10.077309914171,17.4879447078685,8.36976677135272,2.17727711363265,38.2839175887612,2.32727527078292,7.67358555340308,0,0,24.4501378318201,0,0,0,3.1251331330228,6.64695999971087,0,11.4931382768355,9.15313141053959,17.9654638143632,9.99755782400247,26.8276244312594,4.68787486319889,0,0,0,0,0,0,11.002784815418,14.9183406378106,0.538651809526579,9.0014224119131,1.61394733071642,13.6431619502854,11.5166214237329,1.91400695839152,10.9001136148216,0,21.4605926211047,12.2444599988119,4.48771541130422,11.279783030859,10.3913143188402,12.0831542622607,9.48768663620925,13.0327994763911,16.8798451622422,30.6877679339198,32.5112064298064,18.1766457383357,3.98104772431402,1.14994833854341,1.22206028986725,8.00607047437679,9.39085935993422,10.1289291020292,0,0,0,4.92627930882298,17.6098157038881,5.34116834975004,0,3.62972148145992,0.91821828489147,1.83241080922615,17.2871932326666,27.1663061460787,1.32930774541437,2.31694369112849,1.2557316736289,1.19472429772959,0.569219092059585,5.26963757449927,7.81018822508089,24.40010695618,35.258978665063,0.698906672968121,12.2110083054848,33.1874216321562,15.2025779539266,23.7313670883775,1.26085721434945,0.882561266915003,0.451961481561065,13.7041924646751,44.7107876331727,0.0633107959558787,15.0574564705798,8.01588202515337,0,8.79162282161373,2.73771792592801,15.8060502708964,8.57974989309823,0.576219191952599,3.47907099583211,2.35694034616795,18.0752594077907,21.5481863403406,68.6448004692446,8.37956710714405,0,0,0,11.1739014769189,8.67528269121738,0.279282401272254,0,0,3.59422200898184,0.429226048136571,0.446342914883745,4.23255876666375,0.720599767084807,0,19.4594460298842,17.2249144016638,21.1647127702141,4.52766414967844,13.4630597984597,0,0,17.5220931826871,14.5791802793068,20.7720169014593,1.1248694577575,0.77380195455795,0,15.094560941967,0.315222829196793,2.30800187793992,1.79520572082991,1.97216073266129,6.33320151154169,0,0,18.0530661734872,1.08599920350743,0.864221491201268,5.87857248196936,13.1703210718736,3.11951578847488,8.17862504570024,69.6869362848773,0,7.95041333473328,0,0.13223260174269,3.25064991980226,11.2770403570668,1.28144895081234,0.157204305099666,0,0,8.4973001716116,14.7369044040884,7.021753835472,0,0,0,0,2.51286554000375,0,0,0.1251909307065,0,0,0,35.6939478135476,18.9970220102402,11.3736838156236,1.99825733481477,1.41159491818903,11.708372645172,5.07223600137888,13.7314418655924,9.81595901358343,18.3085934295862,3.4092540949516,3.52195062453605,3.55924488638614,0,4.08323494160745,19.2742128722648,12.7155428991085,10.5135866328044,0,7.14209601630793,12.8558924430665,2.92425886013794,1.04349012362347,2.70463696194993,1.90402606084398,23.5985025258704,4.54621648006399,3.86678005352958,0.464033759878494,3.18476710958893,26.4018324677681,8.24149692438703,8.7554867079139,7.57109389371906,5.7785949122191,15.4397945789947,13.8326974741562,18.1364740409818,23.8468148553549,30.1026146542955,38.5041008325198,41.0705924724093,16.446303718403,23.8530347026939,29.322933817179,54.0615810089832,26.1366348959706,24.1801239211839,25.8280962750775,0.138258436151731,0,0,0,2.94848863961771,7.6189601713653,2.11312123358627,10.1993571886014,17.6041353995332,4.47758947118121,13.0528669320372,10.3099332141031,0,0.622077260032973,3.7089367678059,18.5458675602293,13.5248709996071,18.1287999398743,5.09197589862076,1.70059936081346,5.7010451559141,1.67593475391973,9.85813487025598,25.7877906154098,1.60114149657094,10.2276023670298,3.3687002508852,0,0,0,0,0.504143392443436,0,0,0,5.39812451755641,5.30863755064832,10.8222873127791,14.2096569364916,13.3483733413509,2.0710797781803,22.0797006549065,0.150420656698515,8.0682027481408,0,8.90482761236836,19.3250862661914,5.91424344868181,0,0,0,0,3.28184885410932,0,0,0.879356221798103,11.7541433428428,0,0.336283722218824,0.606965604236632,0,2.04015451374069,13.4823765440262,19.3781450664283,0.0679697329768317,0,48.9322501259628,17.4633300970549,0.39246546425257,0,9.24898138935504,7.30526976407596,27.4228040847649,8.5995303819669,0,6.79458530450724,20.2260080140538,10.7792128827599,0.801711364730253,2.27937780579341,1.3657478167516,0.691259661814092,0.430227358820278,2.01164401241961,2.2155485237381,0,14.8919464553633,6.82454048461504,24.8440124134133,2.23710863595585,4.31861027907069,18.2876887473404,0,0.102662806856247,1.1598144313382,2.91426595835484,22.9260674192864,8.7538341071002,4.28112326799247,22.702162489831,21.4384007653587,4.67984815056688,0.848915739187391,5.02686989159102,0.470317296361523,0,0.707029641304878,0.196308467114945,0,0.8453114551668,2.20905249094162,1.4097587696978,4.44759427017683,8.49499825361896,6.42794178980367,4.94052820401969,1.36410323371586,0,0,0.143339583151451,17.3548718412503,0.0679914901909147,0.436350690340377,3.7031878836078,10.415860508669,5.0839319149456,11.6809171773423,13.6259738821885,15.5157112188448,26.6066852124018,16.0122462694911,6.68043513163901,7.62727666139213,15.5438674361273,0.151557396436479,0.267964130156178,0,0,0.426467963801962,3.57096647195611,7.81525809015674,6.82821857254437,14.2407465477379,0.12729431655633,1.41482032270754,2.61260097476354,1.36893320434112,3.50230675675855,1.86477734020959,1.66330178273007,16.117847184973,29.243292770494,9.653614114347,1.16772762738563,4.69281884806909,0.977931553462932,7.73102738799903,0,0.805095174364105,5.12909587685173 | |||
|short_description=p2@KIF20A | |||
}} |
Latest revision as of 22:00, 24 September 2015
Short description: | p2@KIF20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIF20A_5end |
Coexpression cluster: | C1026_Fibroblast_mesothelioma_Chondrocyte_epidermoid_Reticulocytes_clear_myxofibrosarcoma |
Association with transcript: | 0bp_to_ENST00000503417, ENST00000508792, ENST00000511638_5end |
EntrezGene: | KIF20A |
HGNC: | 9787 |
UniProt: | B4DL79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.15e-19 | 253 |
embryonic cell | 3.47e-15 | 250 |
fibroblast | 1.02e-09 | 76 |
mesodermal cell | 4.49e-09 | 121 |
squamous epithelial cell | 1.08e-07 | 63 |
lining cell | 2.89e-07 | 58 |
barrier cell | 2.89e-07 | 58 |
skin fibroblast | 5.40e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.20e-27 | 235 |
disease of cellular proliferation | 1.72e-26 | 239 |
cell type cancer | 8.14e-15 | 143 |
carcinoma | 6.41e-14 | 106 |
organ system cancer | 1.90e-10 | 137 |