FFCP PHASE1:Hg19::chrX:150151824..150151851,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:150151824..150151851,+
|short_description=p2@HMGB3
|description=CAGE_peak_2_at_HMGB3_5end
|association_with_transcript=-6bp_to_ENST00000455596_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3149 | |EntrezGene=3149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5004 | |HGNC=5004 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQU1 | |UniProt=E7EQU1 | ||
|association_with_transcript=-6bp_to_ENST00000455596_5end | |||
|cluster_id=chrX:150151824..150151851,+ | |||
|description=CAGE_peak_2_at_HMGB3_5end | |||
|id=chrX:150151824..150151851,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.97e-37!254;CL:0000012!5.59e-16!682;CL:0000548!4.47e-15!679;CL:0000004!4.47e-15!679;CL:0000255!4.47e-15!679;CL:0000003!1.35e-13!722;CL:0000063!5.24e-11!578;CL:0000223!3.75e-10!59;CL:0002321!4.50e-10!248;CL:0000220!1.97e-09!246;CL:0000076!5.58e-09!62;CL:0002076!6.50e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.95e-37,253;CL:0000223,4.37e-11,58;CL:0002321,4.01e-09,250;CL:0000076,2.60e-08,63;CL:0002076,1.85e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.32e-27!235;DOID:14566!1.22e-25!239;DOID:305!6.85e-25!106;DOID:0050687!4.05e-23!143;DOID:0050686!7.94e-12!137 | |||
|ontology_enrichment_disease_v019=DOID:305;2.57e-08;106!DOID:0050615;8.40e-07;16!DOID:299;9.45e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.34e-26,235;DOID:305,1.41e-26,106;DOID:14566,1.18e-24,239;DOID:0050687,2.20e-24,143;DOID:0050686,7.97e-11,137;DOID:299,5.08e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005911!4.18e-08!82;UBERON:0004119!5.34e-07!169;UBERON:0000925!5.34e-07!169;UBERON:0006595!5.34e-07!169;UBERON:0004807!5.98e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;2.16e-07;36!UBERON:0004807;2.98e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.34e-08,82;UBERON:0004807,1.32e-07,28;UBERON:0004119,4.87e-07,160;UBERON:0000925,4.87e-07,160;UBERON:0006595,4.87e-07,160;UBERON:0000065,8.51e-07,54 | |||
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| ||
|short_description=p2@HMGB3 | |||
}} | }} |
Latest revision as of 22:17, 19 September 2015
Short description: | p2@HMGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HMGB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000455596_5end |
EntrezGene: | HMGB3 |
HGNC: | 5004 |
UniProt: | E7EQU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.95e-37 | 253 |
endodermal cell | 4.37e-11 | 58 |
embryonic cell | 4.01e-09 | 250 |
squamous epithelial cell | 2.60e-08 | 63 |
endo-epithelial cell | 1.85e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.34e-08 | 82 |
respiratory system epithelium | 1.32e-07 | 28 |
endoderm-derived structure | 4.87e-07 | 160 |
endoderm | 4.87e-07 | 160 |
presumptive endoderm | 4.87e-07 | 160 |
respiratory tract | 8.51e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.34e-26 | 235 |
carcinoma | 1.41e-26 | 106 |
disease of cellular proliferation | 1.18e-24 | 239 |
cell type cancer | 2.20e-24 | 143 |
organ system cancer | 7.97e-11 | 137 |
adenocarcinoma | 5.08e-07 | 25 |