FFCP PHASE1:Mm9::chr17:34765325..34765343,-: Difference between revisions
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{{FFCP|EntrezGene=54397|HGNC=|MCL_coexpression_id=2127|UniProt=G5E8W7|association_with_transcript=111bp_to_ENSMUST00000167097_5end|description=CAGE_peak_4_at_Ppt2_5end|id=chr17:34765325..34765343,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.43e-08,9;CL:0002251,4.43e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.75e-11!43;UBERON:0000344!2.79e-10!15;UBERON:0005409!5.30e-10!59;UBERON:0001008!7.45e-10!17;UBERON:0006554!2.09e-09!16;UBERON:0001242!3.98e-09!13;UBERON:0000060!3.98e-09!13;UBERON:0001262!3.98e-09!13;UBERON:0004786!3.98e-09!13;UBERON:0002113!3.59e-08!14;UBERON:0003918!3.59e-08!14;UBERON:0005095!3.59e-08!14;UBERON:0007687!3.59e-08!14;UBERON:0001007!5.13e-07!128;UBERON:0001555!5.13e-07!128;UBERON:0007026!5.13e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.39e-18,31;UBERON:0005409,1.77e-16,47;UBERON:0000344,4.44e-15,15;UBERON:0001242,7.08e-13,13;UBERON:0001262,7.08e-13,13;UBERON:0004786,7.08e-13,13;UBERON:0001007,7.07e-12,116;UBERON:0001555,7.07e-12,116;UBERON:0007026,7.07e-12,116;UBERON:0004119,1.69e-11,118;UBERON:0000925,1.69e-11,118;UBERON:0006595,1.69e-11,118;UBERON:0002113,1.20e-10,14;UBERON:0003918,1.20e-10,14;UBERON:0011143,1.20e-10,14;UBERON:0005095,1.20e-10,14;UBERON:0007687,1.20e-10,14;UBERON:0004921,1.42e-10,114;UBERON:0001008,2.13e-10,19;UBERON:0006554,1.35e-09,18;UBERON:0004923,3.47e-08,24;UBERON:0003350,4.43e-08,9;UBERON:0004808,4.43e-08,9;UBERON:0001277,4.43e-08,9;UBERON:0005172,2.17e-07,49;UBERON:0005173,2.17e-07,49;UBERON:0002417,2.17e-07,49;UBERON:0000916,2.17e-07,49;UBERON:0002108,8.54e-07,4|phase1_expression=0,0.348975407639361,2.27499619694768,0.30246421130683,1.00179145989269,3.02182689441402,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,2.3998863419011,1.83527424853736,2.8711598205751,0.86152399231815,1.07735616342945,3.23039813075836,2.77233142735924,3.76941868114018,0,0,0,4.62162591602039,4.82080471539628,7.55426618170766,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,1.07940638327563,0,4.48026887097336,2.10666630197628,0,0,0,0,0,0,0,0,0.253359865475099,0,4.45317130904334,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0.209446706813455,2.81002760729451,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,2.11491850037158,8.84529654517861,1.68353484709179,0,0,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,0,0,1.65209391491899,3.17340679996253,0,0.232236671860439,1.28867461322093,1.81515172161008,1.77902435075896,0.760902504450237,0.949058123089023,1.31759163779209,0.502670417600539,0.596869416123452,0.58489226135736,1.79763881730844,2.37751854862164,2.98711909881551,0.379335801906163,0.456994050438915,0,1.62921062276251,3.49114476901726,3.22624771495465,5.88099795255593,10.9231509504906,12.0889020437859,11.4759362447274,0.592905254174298,0.166845105716094,0,0,0.405720242777006,0,0.25462585178142,0.863088412352432,0.162135226775035,1.92192989231657,5.75072826109418,2.97712758134803,6.24075346229121,2.52578877947112,3.94674309748207,1.4473305640901,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0.922305443831782,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,7.93902232997863,2.30840754118072,0.807322133479528,1.62844897306021,4.17803204010978,4.76008609260678,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86404272657441,2.71814784818809,2.18362563746178,0.944050424693745,1.98368293740806,1.83229159388821,2.33306951925227,0,0,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,2.49403421976732,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,1.07184189539533,4.01257683228291,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0,0.962757628775446,0.505394423527595,0,0,0.280924522409647,0.256100609619477,0.229741875822453,0,0,0,0.824171801606613,0,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,0,0.463735671240843|short_description=p4@Ppt2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54397 | |||
|HGNC= | |||
|MCL_coexpression_id=2127 | |||
|TSSclassifier=NA | |||
|UniProt=G5E8W7 | |||
|association_with_transcript=111bp_to_ENSMUST00000167097_5end | |||
|cluster_id=chr17:34765325..34765343,- | |||
|description=CAGE_peak_4_at_Ppt2_5end | |||
|id=chr17:34765325..34765343,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.43e-08,9;CL:0002251,4.43e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.75e-11!43;UBERON:0000344!2.79e-10!15;UBERON:0005409!5.30e-10!59;UBERON:0001008!7.45e-10!17;UBERON:0006554!2.09e-09!16;UBERON:0001242!3.98e-09!13;UBERON:0000060!3.98e-09!13;UBERON:0001262!3.98e-09!13;UBERON:0004786!3.98e-09!13;UBERON:0002113!3.59e-08!14;UBERON:0003918!3.59e-08!14;UBERON:0005095!3.59e-08!14;UBERON:0007687!3.59e-08!14;UBERON:0001007!5.13e-07!128;UBERON:0001555!5.13e-07!128;UBERON:0007026!5.13e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.39e-18,31;UBERON:0005409,1.77e-16,47;UBERON:0000344,4.44e-15,15;UBERON:0001242,7.08e-13,13;UBERON:0001262,7.08e-13,13;UBERON:0004786,7.08e-13,13;UBERON:0001007,7.07e-12,116;UBERON:0001555,7.07e-12,116;UBERON:0007026,7.07e-12,116;UBERON:0004119,1.69e-11,118;UBERON:0000925,1.69e-11,118;UBERON:0006595,1.69e-11,118;UBERON:0002113,1.20e-10,14;UBERON:0003918,1.20e-10,14;UBERON:0011143,1.20e-10,14;UBERON:0005095,1.20e-10,14;UBERON:0007687,1.20e-10,14;UBERON:0004921,1.42e-10,114;UBERON:0001008,2.13e-10,19;UBERON:0006554,1.35e-09,18;UBERON:0004923,3.47e-08,24;UBERON:0003350,4.43e-08,9;UBERON:0004808,4.43e-08,9;UBERON:0001277,4.43e-08,9;UBERON:0005172,2.17e-07,49;UBERON:0005173,2.17e-07,49;UBERON:0002417,2.17e-07,49;UBERON:0000916,2.17e-07,49;UBERON:0002108,8.54e-07,4 | |||
|phase1_expression=0,0.348975407639361,2.27499619694768,0.30246421130683,1.00179145989269,3.02182689441402,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,2.3998863419011,1.83527424853736,2.8711598205751,0.86152399231815,1.07735616342945,3.23039813075836,2.77233142735924,3.76941868114018,0,0,0,4.62162591602039,4.82080471539628,7.55426618170766,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,1.07940638327563,0,4.48026887097336,2.10666630197628,0,0,0,0,0,0,0,0,0.253359865475099,0,4.45317130904334,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0.209446706813455,2.81002760729451,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,2.11491850037158,8.84529654517861,1.68353484709179,0,0,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,0,0,1.65209391491899,3.17340679996253,0,0.232236671860439,1.28867461322093,1.81515172161008,1.77902435075896,0.760902504450237,0.949058123089023,1.31759163779209,0.502670417600539,0.596869416123452,0.58489226135736,1.79763881730844,2.37751854862164,2.98711909881551,0.379335801906163,0.456994050438915,0,1.62921062276251,3.49114476901726,3.22624771495465,5.88099795255593,10.9231509504906,12.0889020437859,11.4759362447274,0.592905254174298,0.166845105716094,0,0,0.405720242777006,0,0.25462585178142,0.863088412352432,0.162135226775035,1.92192989231657,5.75072826109418,2.97712758134803,6.24075346229121,2.52578877947112,3.94674309748207,1.4473305640901,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0.922305443831782,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,7.93902232997863,2.30840754118072,0.807322133479528,1.62844897306021,4.17803204010978,4.76008609260678,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86404272657441,2.71814784818809,2.18362563746178,0.944050424693745,1.98368293740806,1.83229159388821,2.33306951925227,0,0,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,2.49403421976732,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,1.07184189539533,4.01257683228291,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0,0.962757628775446,0.505394423527595,0,0,0.280924522409647,0.256100609619477,0.229741875822453,0,0,0,0.824171801606613,0,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,0,0.463735671240843 | |||
|short_description=p4@Ppt2 | |||
}} |
Latest revision as of 08:34, 26 September 2015
Short description: | p4@Ppt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2127 |
Association with transcript: | 111bp_to_ENSMUST00000167097_5end |
EntrezGene: | Ppt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.43e-08 | 9 |
epithelial cell of alimentary canal | 4.43e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.39e-18 | 31 |
gastrointestinal system | 1.77e-16 | 47 |
mucosa | 4.44e-15 | 15 |
intestinal mucosa | 7.08e-13 | 13 |
wall of intestine | 7.08e-13 | 13 |
gastrointestinal system mucosa | 7.08e-13 | 13 |
digestive system | 7.07e-12 | 116 |
digestive tract | 7.07e-12 | 116 |
primitive gut | 7.07e-12 | 116 |
endoderm-derived structure | 1.69e-11 | 118 |
endoderm | 1.69e-11 | 118 |
presumptive endoderm | 1.69e-11 | 118 |
kidney | 1.20e-10 | 14 |
kidney mesenchyme | 1.20e-10 | 14 |
upper urinary tract | 1.20e-10 | 14 |
kidney rudiment | 1.20e-10 | 14 |
kidney field | 1.20e-10 | 14 |
subdivision of digestive tract | 1.42e-10 | 114 |
renal system | 2.13e-10 | 19 |
urinary system structure | 1.35e-09 | 18 |
organ component layer | 3.47e-08 | 24 |
epithelium of mucosa | 4.43e-08 | 9 |
gastrointestinal system epithelium | 4.43e-08 | 9 |
intestinal epithelium | 4.43e-08 | 9 |
abdomen element | 2.17e-07 | 49 |
abdominal segment element | 2.17e-07 | 49 |
abdominal segment of trunk | 2.17e-07 | 49 |
abdomen | 2.17e-07 | 49 |
small intestine | 8.54e-07 | 4 |