FFCP PHASE1:Hg19::chr5:153666993..153667004,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55568 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19873 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000519571_5end | |||
|cluster_id=chr5:153666993..153667004,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_9_at_GALNT10_5end | |||
|id=chr5:153666993..153667004,+ | |||
|ontology_enrichment_celltype=CL:0000213!7.47e-14!57;CL:0000215!7.47e-14!57;CL:0002139!3.63e-11!24;CL:0000222!6.81e-11!119;CL:0000076!6.12e-09!62;CL:1000413!6.97e-09!9;CL:0000115!9.76e-09!35;CL:0000071!1.12e-08!18;CL:0002546!1.12e-08!18;CL:0002078!5.51e-08!44;CL:0000220!6.87e-08!246;CL:0000077!7.07e-08!19;CL:0002321!1.05e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.95e-10;4!CL:0002222;1.95e-10;4!CL:0002224;1.95e-10;4!CL:1000413;4.66e-10;9!CL:0002548;3.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.95e-10,4;CL:0002222,1.95e-10,4;CL:0002224,1.95e-10,4;CL:1000413,4.89e-10,9;CL:0000066,3.27e-08,253;CL:0000213,2.37e-07,58;CL:0000215,2.37e-07,58;CL:0002548,3.68e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.52e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;7.81e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.57e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.14e-12!79;UBERON:0007798!7.14e-12!79;UBERON:0000055!1.10e-09!69;UBERON:0000487!1.93e-09!22;UBERON:0003915!6.97e-09!9;UBERON:0004700!6.97e-09!9;UBERON:0001917!6.97e-09!9;UBERON:0001637!8.20e-09!42;UBERON:0003509!8.20e-09!42;UBERON:0004572!8.20e-09!42;UBERON:0004535!9.65e-09!110;UBERON:0001986!1.12e-08!18;UBERON:0004638!1.12e-08!18;UBERON:0004852!1.12e-08!18;UBERON:0001981!2.06e-08!60;UBERON:0007500!2.06e-08!60;UBERON:0004537!2.06e-08!60;UBERON:0006965!2.06e-08!60;UBERON:0001009!2.94e-08!113;UBERON:0006914!6.82e-08!25;UBERON:0004872!7.63e-07!84;UBERON:0003914!8.80e-07!118;UBERON:0000488!9.90e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.95e-10;4!UBERON:0005389;1.95e-10;4!UBERON:0000484;1.95e-10;4!UBERON:0000965;1.95e-10;4!UBERON:0001803;1.95e-10;4!UBERON:0003915;4.66e-10;9!UBERON:0004700;4.66e-10;9!UBERON:0001917;4.66e-10;9!UBERON:0007625;2.54e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,2.01e-11,8;UBERON:0010077,1.95e-10,4;UBERON:0005389,1.95e-10,4;UBERON:0000484,1.95e-10,4;UBERON:0002546,1.95e-10,4;UBERON:0000965,1.95e-10,4;UBERON:0001803,1.95e-10,4;UBERON:0003073,1.95e-10,4;UBERON:0005426,1.95e-10,4;UBERON:0003915,4.89e-10,9;UBERON:0004700,4.89e-10,9;UBERON:0001917,4.89e-10,9;UBERON:0007625,2.27e-08,11 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,1.55210578223795,0.43917392846563,0.785874452986276,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.73570250803797,0,0.838998872419812,1.10047216776027,1.04497483268405,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0,0,1.12135520028461,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0.514703430895577,0,0,0,0,0,0,0,0,1.17408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0.984043937099117,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0.384380134730212,1.02090169995667,0,0,0,0,0,0,0,1.11194531462352,0.715624433709956,0.372158369359667,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.845086807596724,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68900326502395,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,12.5942399994522,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,0,0,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,1.54787429224455,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0.67952103036807,0.627617077873999,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.394028536495991,0.83927341015997,1.26720403823288,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,1.88195521672762,0,0.747511887973863,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.874862855734746,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,4.07439023612359,0,0.226705925512272,0,0,0.537266523244462,2.47041157728778,0.219284049578707,0,0.192914038270915,1.01365464391844,0.76872455576384,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00108261702862,0,0,0,0,1.72742072974897,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@GALNT10 | |||
}} |
Latest revision as of 11:47, 16 September 2015
Short description: | p9@GALNT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GALNT10_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -25bp_to_ENST00000519571_5end |
EntrezGene: | GALNT10 |
HGNC: | 19873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.95e-10 | 4 |
vertebrate lens cell | 1.95e-10 | 4 |
lens epithelial cell | 1.95e-10 | 4 |
endothelial cell of artery | 4.89e-10 | 9 |
epithelial cell | 3.27e-08 | 253 |
lining cell | 2.37e-07 | 58 |
barrier cell | 2.37e-07 | 58 |
cardiac fibroblast | 3.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 2.01e-11 | 8 |
cuboidal epithelium | 1.95e-10 | 4 |
transparent eye structure | 1.95e-10 | 4 |
simple cuboidal epithelium | 1.95e-10 | 4 |
cranial placode | 1.95e-10 | 4 |
lens of camera-type eye | 1.95e-10 | 4 |
epithelium of lens | 1.95e-10 | 4 |
lens placode | 1.95e-10 | 4 |
lens vesicle | 1.95e-10 | 4 |
endothelial tube | 4.89e-10 | 9 |
arterial system endothelium | 4.89e-10 | 9 |
endothelium of artery | 4.89e-10 | 9 |
pigment epithelium of eye | 2.27e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.57e-11 | 1 |