FFCP PHASE1:Mm9::chr17:71337821..71337827,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:71337821..71337827,+|id=chr17:71337821..71337827,+|ontology_enrichment_celltype=CL:0002563!1.65e-30!9;CL:0002251!1.65e-30!9;CL:0000066!1.27e-21!25;CL:0000239!3.27e-21!6;CL:0000677!3.27e-21!6;CL:0000212!3.27e-21!6;CL:0000584!3.27e-21!6;CL:0000075!4.26e-18!7;CL:0002076!1.07e-17!15;CL:0000223!4.21e-16!20;CL:0000473!2.52e-11!3;CL:0000627!2.52e-11!3;CL:0000682!2.52e-11!3;CL:0002250!7.48e-11!3|ontology_enrichment_celltype_v019_2=CL:0000239,1.63e-40,6;CL:0000677,1.63e-40,6;CL:0000584,1.63e-40,6;CL:0002563,1.42e-36,9;CL:0002251,1.42e-36,9;CL:0000075,1.01e-34,7;CL:0000066,5.40e-32,25;CL:0002076,8.16e-22,15;CL:0000223,2.54e-21,20;CL:0000682,7.30e-21,3;CL:0000473,2.70e-09,7;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.47e-37!15;UBERON:0001242!1.54e-30!13;UBERON:0000060!1.54e-30!13;UBERON:0001262!1.54e-30!13;UBERON:0004786!1.54e-30!13;UBERON:0003350!1.65e-30!9;UBERON:0004808!1.65e-30!9;UBERON:0001277!1.65e-30!9;UBERON:0000485!1.09e-24!11;UBERON:0004923!4.48e-22!24;UBERON:0000160!7.93e-13!43;UBERON:0005409!5.94e-10!59;UBERON:0001962!6.69e-08!2;UBERON:0001961!6.69e-08!2;UBERON:0001744!6.69e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.42e-36,9;UBERON:0004808,1.42e-36,9;UBERON:0001277,1.42e-36,9;UBERON:0000344,1.31e-35,15;UBERON:0000485,7.16e-30,11;UBERON:0001242,3.16e-25,13;UBERON:0001262,3.16e-25,13;UBERON:0004786,3.16e-25,13;UBERON:0004923,5.31e-22,24;UBERON:0001962,4.26e-14,2;UBERON:0001961,4.26e-14,2;UBERON:0001744,4.26e-14,2;UBERON:0000160,2.54e-10,31;UBERON:0002465,1.03e-09,3;UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1;UBERON:0003199,5.62e-08,1;UBERON:0003929,2.62e-07,55|phase1_expression=0,2.44282785347553,4.09499315450582,2.72217790176147,3.50627010962443,3.02182689441402,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.2940928106717,5.16808767703518,1.7230479846363,2.15471232685889,0,0,0.443461021310609,0,0,0,2.88851619751275,0.332469290716985,0.816677425049476,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8121403446973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:71337821..71337827,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:71337821..71337827,+ | |||
|description=CAGE_peak_at_chr17:71337821..71337827,+ | |||
|id=chr17:71337821..71337827,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.65e-30!9;CL:0002251!1.65e-30!9;CL:0000066!1.27e-21!25;CL:0000239!3.27e-21!6;CL:0000677!3.27e-21!6;CL:0000212!3.27e-21!6;CL:0000584!3.27e-21!6;CL:0000075!4.26e-18!7;CL:0002076!1.07e-17!15;CL:0000223!4.21e-16!20;CL:0000473!2.52e-11!3;CL:0000627!2.52e-11!3;CL:0000682!2.52e-11!3;CL:0002250!7.48e-11!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.63e-40,6;CL:0000677,1.63e-40,6;CL:0000584,1.63e-40,6;CL:0002563,1.42e-36,9;CL:0002251,1.42e-36,9;CL:0000075,1.01e-34,7;CL:0000066,5.40e-32,25;CL:0002076,8.16e-22,15;CL:0000223,2.54e-21,20;CL:0000682,7.30e-21,3;CL:0000473,2.70e-09,7;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.47e-37!15;UBERON:0001242!1.54e-30!13;UBERON:0000060!1.54e-30!13;UBERON:0001262!1.54e-30!13;UBERON:0004786!1.54e-30!13;UBERON:0003350!1.65e-30!9;UBERON:0004808!1.65e-30!9;UBERON:0001277!1.65e-30!9;UBERON:0000485!1.09e-24!11;UBERON:0004923!4.48e-22!24;UBERON:0000160!7.93e-13!43;UBERON:0005409!5.94e-10!59;UBERON:0001962!6.69e-08!2;UBERON:0001961!6.69e-08!2;UBERON:0001744!6.69e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.42e-36,9;UBERON:0004808,1.42e-36,9;UBERON:0001277,1.42e-36,9;UBERON:0000344,1.31e-35,15;UBERON:0000485,7.16e-30,11;UBERON:0001242,3.16e-25,13;UBERON:0001262,3.16e-25,13;UBERON:0004786,3.16e-25,13;UBERON:0004923,5.31e-22,24;UBERON:0001962,4.26e-14,2;UBERON:0001961,4.26e-14,2;UBERON:0001744,4.26e-14,2;UBERON:0000160,2.54e-10,31;UBERON:0002465,1.03e-09,3;UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1;UBERON:0003199,5.62e-08,1;UBERON:0003929,2.62e-07,55 | |||
|phase1_expression=0,2.44282785347553,4.09499315450582,2.72217790176147,3.50627010962443,3.02182689441402,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.2940928106717,5.16808767703518,1.7230479846363,2.15471232685889,0,0,0.443461021310609,0,0,0,2.88851619751275,0.332469290716985,0.816677425049476,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8121403446973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:71337821..71337827,+ | |||
}} |
Latest revision as of 07:11, 5 August 2015
Short description: | p@chr17:71337821..71337827, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:71337821..71337827, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.63e-40 | 6 |
gut absorptive cell | 1.63e-40 | 6 |
enterocyte | 1.63e-40 | 6 |
intestinal epithelial cell | 1.42e-36 | 9 |
epithelial cell of alimentary canal | 1.42e-36 | 9 |
columnar/cuboidal epithelial cell | 1.01e-34 | 7 |
epithelial cell | 5.40e-32 | 25 |
endo-epithelial cell | 8.16e-22 | 15 |
endodermal cell | 2.54e-21 | 20 |
M cell of gut | 7.30e-21 | 3 |
defensive cell | 2.70e-09 | 7 |
lining cell | 1.56e-08 | 1 |
meso-epithelial cell | 1.56e-08 | 1 |
endothelial cell | 1.56e-08 | 1 |
endothelial cell of sinusoid | 1.56e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.56e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.42e-36 | 9 |
gastrointestinal system epithelium | 1.42e-36 | 9 |
intestinal epithelium | 1.42e-36 | 9 |
mucosa | 1.31e-35 | 15 |
simple columnar epithelium | 7.16e-30 | 11 |
intestinal mucosa | 3.16e-25 | 13 |
wall of intestine | 3.16e-25 | 13 |
gastrointestinal system mucosa | 3.16e-25 | 13 |
organ component layer | 5.31e-22 | 24 |
gut-associated lymphoid tissue | 4.26e-14 | 2 |
mucosa-associated lymphoid tissue | 4.26e-14 | 2 |
lymphoid tissue | 4.26e-14 | 2 |
intestine | 2.54e-10 | 31 |
lymphoid system | 1.03e-09 | 3 |
bile duct | 1.56e-08 | 1 |
hepatic sinusoid | 1.56e-08 | 1 |
parenchyma | 1.56e-08 | 1 |
abdomen blood vessel | 1.56e-08 | 1 |
sinusoid | 1.56e-08 | 1 |
digestive system duct | 1.56e-08 | 1 |
abdominal segment blood vessel | 1.56e-08 | 1 |
trunk blood vessel | 1.56e-08 | 1 |
liver parenchyma | 1.56e-08 | 1 |
liver lobule | 1.56e-08 | 1 |
biliary system | 1.56e-08 | 1 |
biliary tree | 1.56e-08 | 1 |
biliary bud | 1.56e-08 | 1 |
hepatic duct | 1.56e-08 | 1 |
egg chamber | 5.62e-08 | 1 |
gut epithelium | 2.62e-07 | 55 |