FFCP PHASE1:Mm9::chr18:74899765..74899800,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:74899765..74899800,+|id=chr18:74899765..74899800,+|ontology_enrichment_celltype=CL:0002563!3.02e-10!9;CL:0002251!3.02e-10!9;CL:0000239!1.35e-07!6;CL:0000677!1.35e-07!6;CL:0000212!1.35e-07!6;CL:0000584!1.35e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.38e-19,9;CL:0002251,2.38e-19,9;CL:0000066,4.94e-15,25;CL:0000239,6.28e-14,6;CL:0000677,6.28e-14,6;CL:0000584,6.28e-14,6;CL:0000075,7.76e-12,7;CL:0000223,1.52e-11,20;CL:0002076,6.09e-11,15;CL:0000682,5.59e-08,3;CL:0002250,5.28e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.19e-20!43;UBERON:0005409!2.44e-18!59;UBERON:0000344!2.11e-16!15;UBERON:0001242!1.49e-14!13;UBERON:0000060!1.49e-14!13;UBERON:0001262!1.49e-14!13;UBERON:0004786!1.49e-14!13;UBERON:0004923!7.25e-11!24;UBERON:0003350!3.02e-10!9;UBERON:0004808!3.02e-10!9;UBERON:0001277!3.02e-10!9;UBERON:0004119!6.37e-10!130;UBERON:0000925!6.37e-10!130;UBERON:0006595!6.37e-10!130;UBERON:0001007!5.21e-09!128;UBERON:0001555!5.21e-09!128;UBERON:0007026!5.21e-09!128;UBERON:0004921!5.20e-08!126;UBERON:0004185!5.20e-08!126;UBERON:0000485!6.72e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.39e-56,31;UBERON:0005409,1.20e-37,47;UBERON:0000344,5.22e-32,15;UBERON:0001242,3.34e-28,13;UBERON:0001262,3.34e-28,13;UBERON:0004786,3.34e-28,13;UBERON:0003350,2.38e-19,9;UBERON:0004808,2.38e-19,9;UBERON:0001277,2.38e-19,9;UBERON:0004923,1.11e-18,24;UBERON:0001007,6.50e-17,116;UBERON:0001555,6.50e-17,116;UBERON:0007026,6.50e-17,116;UBERON:0004119,1.68e-16,118;UBERON:0000925,1.68e-16,118;UBERON:0006595,1.68e-16,118;UBERON:0000485,1.58e-15,11;UBERON:0004921,7.81e-15,114;UBERON:0002108,8.45e-10,4;UBERON:0000331,6.23e-08,3;UBERON:0002116,6.23e-08,3;UBERON:0001204,6.23e-08,3;UBERON:0001168,6.23e-08,3|phase1_expression=0,5.23463111459042,4.54999239389536,10.2837831844322,4.50806156951712,3.52546471014969,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,2.75291137280604,4.59385571292016,8.18447792702242,3.878482188346,5.51067916423484,3.78045194639896,4.8780712344167,0,0,0,2.3108129580102,2.99222361645286,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61910957491345,2.59910566979068,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,0,0,8.92130714056255,11.6358249331959,0,0.232236671860439,2.06187938115349,4.43703754171354,6.22658522765637,8.94060442729028,4.74529061544512,8.39964669092456,4.77536896720512,6.16765063327568,6.04388670069272,4.49409704327111,7.3486936957396,12.3467589417708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.482354319504834,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.757736633841335,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756037385752609,0.418176592028937,0.87345025498471,0.134864346384821,0.0826534557253359,0,2.98114438571124,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0,0.561849044819294,0.448176066834085,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,1.1921809497366,0.872078499793971,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0,0.593175090620871,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0|short_description=p@chr18:74899765..74899800,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:74899765..74899800,+ | |||
|description=CAGE_peak_at_chr18:74899765..74899800,+ | |||
|id=chr18:74899765..74899800,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.02e-10!9;CL:0002251!3.02e-10!9;CL:0000239!1.35e-07!6;CL:0000677!1.35e-07!6;CL:0000212!1.35e-07!6;CL:0000584!1.35e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.38e-19,9;CL:0002251,2.38e-19,9;CL:0000066,4.94e-15,25;CL:0000239,6.28e-14,6;CL:0000677,6.28e-14,6;CL:0000584,6.28e-14,6;CL:0000075,7.76e-12,7;CL:0000223,1.52e-11,20;CL:0002076,6.09e-11,15;CL:0000682,5.59e-08,3;CL:0002250,5.28e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.19e-20!43;UBERON:0005409!2.44e-18!59;UBERON:0000344!2.11e-16!15;UBERON:0001242!1.49e-14!13;UBERON:0000060!1.49e-14!13;UBERON:0001262!1.49e-14!13;UBERON:0004786!1.49e-14!13;UBERON:0004923!7.25e-11!24;UBERON:0003350!3.02e-10!9;UBERON:0004808!3.02e-10!9;UBERON:0001277!3.02e-10!9;UBERON:0004119!6.37e-10!130;UBERON:0000925!6.37e-10!130;UBERON:0006595!6.37e-10!130;UBERON:0001007!5.21e-09!128;UBERON:0001555!5.21e-09!128;UBERON:0007026!5.21e-09!128;UBERON:0004921!5.20e-08!126;UBERON:0004185!5.20e-08!126;UBERON:0000485!6.72e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.39e-56,31;UBERON:0005409,1.20e-37,47;UBERON:0000344,5.22e-32,15;UBERON:0001242,3.34e-28,13;UBERON:0001262,3.34e-28,13;UBERON:0004786,3.34e-28,13;UBERON:0003350,2.38e-19,9;UBERON:0004808,2.38e-19,9;UBERON:0001277,2.38e-19,9;UBERON:0004923,1.11e-18,24;UBERON:0001007,6.50e-17,116;UBERON:0001555,6.50e-17,116;UBERON:0007026,6.50e-17,116;UBERON:0004119,1.68e-16,118;UBERON:0000925,1.68e-16,118;UBERON:0006595,1.68e-16,118;UBERON:0000485,1.58e-15,11;UBERON:0004921,7.81e-15,114;UBERON:0002108,8.45e-10,4;UBERON:0000331,6.23e-08,3;UBERON:0002116,6.23e-08,3;UBERON:0001204,6.23e-08,3;UBERON:0001168,6.23e-08,3 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,10.2837831844322,4.50806156951712,3.52546471014969,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,2.75291137280604,4.59385571292016,8.18447792702242,3.878482188346,5.51067916423484,3.78045194639896,4.8780712344167,0,0,0,2.3108129580102,2.99222361645286,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61910957491345,2.59910566979068,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,0,0,8.92130714056255,11.6358249331959,0,0.232236671860439,2.06187938115349,4.43703754171354,6.22658522765637,8.94060442729028,4.74529061544512,8.39964669092456,4.77536896720512,6.16765063327568,6.04388670069272,4.49409704327111,7.3486936957396,12.3467589417708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.482354319504834,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.757736633841335,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756037385752609,0.418176592028937,0.87345025498471,0.134864346384821,0.0826534557253359,0,2.98114438571124,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0,0.561849044819294,0.448176066834085,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,1.1921809497366,0.872078499793971,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0,0.593175090620871,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p@chr18:74899765..74899800,+ | |||
}} |
Latest revision as of 03:05, 6 August 2015
Short description: | p@chr18:74899765..74899800, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:74899765..74899800, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.38e-19 | 9 |
epithelial cell of alimentary canal | 2.38e-19 | 9 |
epithelial cell | 4.94e-15 | 25 |
brush border epithelial cell | 6.28e-14 | 6 |
gut absorptive cell | 6.28e-14 | 6 |
enterocyte | 6.28e-14 | 6 |
columnar/cuboidal epithelial cell | 7.76e-12 | 7 |
endodermal cell | 1.52e-11 | 20 |
endo-epithelial cell | 6.09e-11 | 15 |
M cell of gut | 5.59e-08 | 3 |
intestinal crypt stem cell | 5.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.39e-56 | 31 |
gastrointestinal system | 1.20e-37 | 47 |
mucosa | 5.22e-32 | 15 |
intestinal mucosa | 3.34e-28 | 13 |
wall of intestine | 3.34e-28 | 13 |
gastrointestinal system mucosa | 3.34e-28 | 13 |
epithelium of mucosa | 2.38e-19 | 9 |
gastrointestinal system epithelium | 2.38e-19 | 9 |
intestinal epithelium | 2.38e-19 | 9 |
organ component layer | 1.11e-18 | 24 |
digestive system | 6.50e-17 | 116 |
digestive tract | 6.50e-17 | 116 |
primitive gut | 6.50e-17 | 116 |
endoderm-derived structure | 1.68e-16 | 118 |
endoderm | 1.68e-16 | 118 |
presumptive endoderm | 1.68e-16 | 118 |
simple columnar epithelium | 1.58e-15 | 11 |
subdivision of digestive tract | 7.81e-15 | 114 |
small intestine | 8.45e-10 | 4 |
ileal mucosa | 6.23e-08 | 3 |
ileum | 6.23e-08 | 3 |
mucosa of small intestine | 6.23e-08 | 3 |
wall of small intestine | 6.23e-08 | 3 |