Personal tools

FFCP PHASE1:Mm9::chr19:29360818..29360831,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=5|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:29360818..29360831,+|id=chr19:29360818..29360831,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,6.31e-16,9;CL:0000789,6.31e-16,9;CL:0002420,6.31e-16,9;CL:0002419,6.31e-16,9;CL:0000790,6.31e-16,9;CL:0000738,8.24e-16,17;CL:0002087,8.24e-16,17;CL:0000893,9.36e-16,6;CL:0002489,9.36e-16,6;CL:0000898,9.36e-16,6;CL:0000809,9.36e-16,6;CL:0000810,9.36e-16,6;CL:0000895,9.36e-16,6;CL:0000808,9.36e-16,6;CL:0000894,9.36e-16,6;CL:0000806,9.36e-16,6;CL:0000807,9.36e-16,6;CL:0000805,9.36e-16,6;CL:0002425,9.36e-16,6;CL:0002436,9.36e-16,6;CL:0002427,9.36e-16,6;CL:0002428,9.36e-16,6;CL:0002429,9.36e-16,6;CL:0002433,9.36e-16,6;CL:0002431,9.36e-16,6;CL:0002432,9.36e-16,6;CL:0000084,5.12e-13,11;CL:0000827,5.12e-13,11;CL:0002476,4.37e-12,2;CL:0000838,6.34e-12,12;CL:0000624,7.15e-12,8;CL:0000542,5.34e-11,13;CL:0000051,5.34e-11,13;CL:0002031,1.51e-10,25;CL:0000988,4.30e-08,32;CL:0002032,4.30e-08,32;CL:0000037,4.30e-08,32;CL:0000837,4.30e-08,32;CL:0002320,5.51e-07,46;CL:0000134,5.51e-07,46;CL:0000625,7.89e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.51e-07,46|phase1_expression=0,0.348975407639361,0.454999239389536,0.90739263392049,0,0,0.233612640595526,0.387369970324729,4.78681655315667,6.08567768437183,2.39705155515707,2.15384829287408,0.513602189793617,0.262261207256992,0.333109761815663,0.607425802169478,0.699561878128147,0.315462165358238,0.411343300817216,0,0,0.198581902401771,0.261199789138935,1.91990907352088,0.22940928106717,0.57423196411502,0,0.430942465371778,0.950117097281869,0,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,2.01656279485478,0.771778308107841,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,0.127687338085188,0.921639199537461,0.263772575460388,0.365950574409639,1.04182674111352,0.279182999001381,0,0.30559649555362,0.294628585473668,0.711858403995515,0,0.227178579999552,0.226714680320357,0,0,0,0,1.29955283489534,0,0.280888840263504,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.904335843315735,0.23517741427141,0.251333182659351,0.494389935468748,0.144599356919912,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0,0.611036183101898,0.373220911830279,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0.378212160335639,0,0,0.556094498451196,0,0,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.210289948564127,0.308713837137853,0.991256348951394,0,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.949058123089023,1.31759163779209,0.754005626400808,0.596869416123452,0,0,2.37751854862164,0.796565093017469,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.140271639780637,0.252946148497029,0.442830443938806,0.31399745568275,0.246794327843601,0,0.500535317148282,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,0,0.324270453550071,0.823684239564244,12.9391385874619,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0.585400943573396,0.472905432318573,0.664394068946325,0.637819074629948,0.655453258862952,0.518054945597687,0.144649058581512,1.50791283939272,2.17562273527484,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.180938774784468,0.238744688006273,0.328281799490123,0.874442509889552,0.556275906031529,0.170870880797853,0,0.185194527369712,2.0720530270516,0.956859594047176,0.228778173206523,0.679913719975421,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0.655087691238533,0.404593039154462,0.0826534557253359,0.26175594198403,0.648074866458964,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,1.01373675294467,0,0.5208175393758,0.104859344425711,0.483168241652012,0,0,0,0.410843828659309,0,0,0.79472541912506,0.480781798079875,0.295379054349154,0.605798699688886,0.457240839929999,0.403304740547362,0.584747284438515,0.384847366561318,0.350630706544707,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.563047426353546,0.73260649706906,0,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.463537303779422,0,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.543216455383447,0,0.474540072496697,0.197008964751127,0,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr19:29360818..29360831,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=5
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr19:29360818..29360831,+
|description=CAGE_peak_at_chr19:29360818..29360831,+
|id=chr19:29360818..29360831,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,6.31e-16,9;CL:0000789,6.31e-16,9;CL:0002420,6.31e-16,9;CL:0002419,6.31e-16,9;CL:0000790,6.31e-16,9;CL:0000738,8.24e-16,17;CL:0002087,8.24e-16,17;CL:0000893,9.36e-16,6;CL:0002489,9.36e-16,6;CL:0000898,9.36e-16,6;CL:0000809,9.36e-16,6;CL:0000810,9.36e-16,6;CL:0000895,9.36e-16,6;CL:0000808,9.36e-16,6;CL:0000894,9.36e-16,6;CL:0000806,9.36e-16,6;CL:0000807,9.36e-16,6;CL:0000805,9.36e-16,6;CL:0002425,9.36e-16,6;CL:0002436,9.36e-16,6;CL:0002427,9.36e-16,6;CL:0002428,9.36e-16,6;CL:0002429,9.36e-16,6;CL:0002433,9.36e-16,6;CL:0002431,9.36e-16,6;CL:0002432,9.36e-16,6;CL:0000084,5.12e-13,11;CL:0000827,5.12e-13,11;CL:0002476,4.37e-12,2;CL:0000838,6.34e-12,12;CL:0000624,7.15e-12,8;CL:0000542,5.34e-11,13;CL:0000051,5.34e-11,13;CL:0002031,1.51e-10,25;CL:0000988,4.30e-08,32;CL:0002032,4.30e-08,32;CL:0000037,4.30e-08,32;CL:0000837,4.30e-08,32;CL:0002320,5.51e-07,46;CL:0000134,5.51e-07,46;CL:0000625,7.89e-07,1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.51e-07,46
|phase1_expression=0,0.348975407639361,0.454999239389536,0.90739263392049,0,0,0.233612640595526,0.387369970324729,4.78681655315667,6.08567768437183,2.39705155515707,2.15384829287408,0.513602189793617,0.262261207256992,0.333109761815663,0.607425802169478,0.699561878128147,0.315462165358238,0.411343300817216,0,0,0.198581902401771,0.261199789138935,1.91990907352088,0.22940928106717,0.57423196411502,0,0.430942465371778,0.950117097281869,0,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,2.01656279485478,0.771778308107841,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,0.127687338085188,0.921639199537461,0.263772575460388,0.365950574409639,1.04182674111352,0.279182999001381,0,0.30559649555362,0.294628585473668,0.711858403995515,0,0.227178579999552,0.226714680320357,0,0,0,0,1.29955283489534,0,0.280888840263504,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.904335843315735,0.23517741427141,0.251333182659351,0.494389935468748,0.144599356919912,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0,0.611036183101898,0.373220911830279,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0.378212160335639,0,0,0.556094498451196,0,0,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.210289948564127,0.308713837137853,0.991256348951394,0,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.949058123089023,1.31759163779209,0.754005626400808,0.596869416123452,0,0,2.37751854862164,0.796565093017469,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.140271639780637,0.252946148497029,0.442830443938806,0.31399745568275,0.246794327843601,0,0.500535317148282,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,0,0.324270453550071,0.823684239564244,12.9391385874619,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0.585400943573396,0.472905432318573,0.664394068946325,0.637819074629948,0.655453258862952,0.518054945597687,0.144649058581512,1.50791283939272,2.17562273527484,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.180938774784468,0.238744688006273,0.328281799490123,0.874442509889552,0.556275906031529,0.170870880797853,0,0.185194527369712,2.0720530270516,0.956859594047176,0.228778173206523,0.679913719975421,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0.655087691238533,0.404593039154462,0.0826534557253359,0.26175594198403,0.648074866458964,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,1.01373675294467,0,0.5208175393758,0.104859344425711,0.483168241652012,0,0,0,0.410843828659309,0,0,0.79472541912506,0.480781798079875,0.295379054349154,0.605798699688886,0.457240839929999,0.403304740547362,0.584747284438515,0.384847366561318,0.350630706544707,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.563047426353546,0.73260649706906,0,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.463537303779422,0,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.543216455383447,0,0.474540072496697,0.197008964751127,0,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0
|short_description=p@chr19:29360818..29360831,+
}}

Latest revision as of 20:41, 3 August 2015

Short description:p@chr19:29360818..29360831, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr19:29360818..29360831, +
Coexpression cluster:MCL_coexpression_mm9:5
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr19:29360818..29360831+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell6.31e-169
alpha-beta T cell6.31e-169
immature T cell6.31e-169
mature T cell6.31e-169
immature alpha-beta T cell6.31e-169
leukocyte8.24e-1617
nongranular leukocyte8.24e-1617
thymocyte9.36e-166
double negative thymocyte9.36e-166
naive T cell9.36e-166
double-positive, alpha-beta thymocyte9.36e-166
CD4-positive, alpha-beta thymocyte9.36e-166
naive thymus-derived CD4-positive, alpha-beta T cell9.36e-166
DN4 thymocyte9.36e-166
DN1 thymic pro-T cell9.36e-166
DN2 thymocyte9.36e-166
DN3 thymocyte9.36e-166
immature single positive thymocyte9.36e-166
early T lineage precursor9.36e-166
mature CD4 single-positive thymocyte9.36e-166
resting double-positive thymocyte9.36e-166
double-positive blast9.36e-166
CD69-positive double-positive thymocyte9.36e-166
CD69-positive, CD4-positive single-positive thymocyte9.36e-166
CD4-positive, CD8-intermediate double-positive thymocyte9.36e-166
CD24-positive, CD4 single-positive thymocyte9.36e-166
T cell5.12e-1311
pro-T cell5.12e-1311
bone marrow macrophage4.37e-122
lymphoid lineage restricted progenitor cell6.34e-1212
CD4-positive, alpha-beta T cell7.15e-128
lymphocyte5.34e-1113
common lymphoid progenitor5.34e-1113
hematopoietic lineage restricted progenitor cell1.51e-1025
hematopoietic cell4.30e-0832
hematopoietic oligopotent progenitor cell4.30e-0832
hematopoietic stem cell4.30e-0832
hematopoietic multipotent progenitor cell4.30e-0832
connective tissue cell5.51e-0746
mesenchymal cell5.51e-0746
CD8-positive, alpha-beta T cell7.89e-071

Uber anatomy
Ontology termp-valuen
connective tissue5.51e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:29360818..29360831,%2B&oldid=3699806"