FFCP PHASE1:Mm9::chr19:58530393..58530404,-: Difference between revisions
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{{FFCP|EntrezGene=14585|HGNC=|MCL_coexpression_id=263|UniProt=D3Z3C9|association_with_transcript=0bp_to_ENSMUST00000131877_5end|description=CAGE_peak_14_at_Gfra1_5end|id=chr19:58530393..58530404,-|ontology_enrichment_celltype=CL:0000540!5.40e-14!33;CL:0000047!5.40e-14!33;CL:0000031!5.40e-14!33;CL:0000404!5.40e-14!33;CL:0000221!5.74e-13!44;CL:0000133!5.74e-13!44;CL:0002319!8.88e-13!43;CL:0000393!3.48e-12!39;CL:0000211!3.48e-12!39;CL:0000055!4.97e-11!50;CL:0000107!5.19e-09!9;CL:0000117!3.75e-07!23;CL:0000337!3.75e-07!23|ontology_enrichment_celltype_v019_2=CL:0000107,1.16e-29,9;CL:0002319,3.22e-17,43;CL:0000221,8.58e-17,44;CL:0000133,8.58e-17,44;CL:0000540,1.57e-15,33;CL:0000047,1.57e-15,33;CL:0000031,1.57e-15,33;CL:0000404,1.57e-15,33;CL:0000393,5.97e-13,39;CL:0000211,5.97e-13,39;CL:0000217,7.08e-13,2;CL:0000328,7.08e-13,2;CL:0002573,7.08e-13,2;CL:0002376,7.08e-13,2;CL:0000218,7.08e-13,2;CL:0000692,7.08e-13,2;CL:0002377,7.08e-13,2;CL:0002375,7.08e-13,2;CL:0002321,5.84e-10,70;CL:0000215,7.12e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.95e-20!75;UBERON:0001016!1.95e-20!75;UBERON:0001017!9.88e-19!73;UBERON:0005743!9.88e-19!73;UBERON:0004121!3.75e-14!102;UBERON:0000924!3.75e-14!102;UBERON:0006601!3.75e-14!102;UBERON:0000010!6.22e-11!11;UBERON:0002020!3.07e-09!34;UBERON:0001049!3.51e-09!52;UBERON:0005068!3.51e-09!52;UBERON:0006241!3.51e-09!52;UBERON:0007135!3.51e-09!52;UBERON:0002410!5.19e-09!9;UBERON:0002346!1.14e-07!71;UBERON:0003075!1.14e-07!71;UBERON:0007284!1.14e-07!71;UBERON:0000955!7.32e-07!50;UBERON:0006238!7.32e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.91e-40,11;UBERON:0002410,1.16e-29,9;UBERON:0000011,1.21e-17,3;UBERON:0001016,3.61e-17,75;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0001017,4.98e-13,73;UBERON:0000013,2.37e-08,3;UBERON:0010313,3.61e-08,3;UBERON:0002342,3.61e-08,3;UBERON:0002005,3.61e-08,3;UBERON:0005428,3.61e-08,3;UBERON:0005062,3.61e-08,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.856952953211411,1.98781686856452,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,1.47314292736834,0.711858403995515,0.745597783301202,4.54357159999104,6.34801104896998,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.19832511523858,1.83000241127451,0.251308704225729,0.869121600961382,0.255715457330331,0.83115217823824,1.78465389374533,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.841159794256509,0.514523061896422,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0,0,0.342745537829186,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0.592905254174298,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0.163934945376675,0,0.631016438832513,1.56175497718655,1.29254038639679,1.91175038362042,1.78238939265915,2.26461224631066,0.404810701674894,1.16902343164525,2.37172666767914,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0|short_description=p14@Gfra1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14585 | |||
|HGNC= | |||
|MCL_coexpression_id=263 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z3C9 | |||
|association_with_transcript=0bp_to_ENSMUST00000131877_5end | |||
|cluster_id=chr19:58530393..58530404,- | |||
|description=CAGE_peak_14_at_Gfra1_5end | |||
|id=chr19:58530393..58530404,- | |||
|ontology_enrichment_celltype=CL:0000540!5.40e-14!33;CL:0000047!5.40e-14!33;CL:0000031!5.40e-14!33;CL:0000404!5.40e-14!33;CL:0000221!5.74e-13!44;CL:0000133!5.74e-13!44;CL:0002319!8.88e-13!43;CL:0000393!3.48e-12!39;CL:0000211!3.48e-12!39;CL:0000055!4.97e-11!50;CL:0000107!5.19e-09!9;CL:0000117!3.75e-07!23;CL:0000337!3.75e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.16e-29,9;CL:0002319,3.22e-17,43;CL:0000221,8.58e-17,44;CL:0000133,8.58e-17,44;CL:0000540,1.57e-15,33;CL:0000047,1.57e-15,33;CL:0000031,1.57e-15,33;CL:0000404,1.57e-15,33;CL:0000393,5.97e-13,39;CL:0000211,5.97e-13,39;CL:0000217,7.08e-13,2;CL:0000328,7.08e-13,2;CL:0002573,7.08e-13,2;CL:0002376,7.08e-13,2;CL:0000218,7.08e-13,2;CL:0000692,7.08e-13,2;CL:0002377,7.08e-13,2;CL:0002375,7.08e-13,2;CL:0002321,5.84e-10,70;CL:0000215,7.12e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.95e-20!75;UBERON:0001016!1.95e-20!75;UBERON:0001017!9.88e-19!73;UBERON:0005743!9.88e-19!73;UBERON:0004121!3.75e-14!102;UBERON:0000924!3.75e-14!102;UBERON:0006601!3.75e-14!102;UBERON:0000010!6.22e-11!11;UBERON:0002020!3.07e-09!34;UBERON:0001049!3.51e-09!52;UBERON:0005068!3.51e-09!52;UBERON:0006241!3.51e-09!52;UBERON:0007135!3.51e-09!52;UBERON:0002410!5.19e-09!9;UBERON:0002346!1.14e-07!71;UBERON:0003075!1.14e-07!71;UBERON:0007284!1.14e-07!71;UBERON:0000955!7.32e-07!50;UBERON:0006238!7.32e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.91e-40,11;UBERON:0002410,1.16e-29,9;UBERON:0000011,1.21e-17,3;UBERON:0001016,3.61e-17,75;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0001017,4.98e-13,73;UBERON:0000013,2.37e-08,3;UBERON:0010313,3.61e-08,3;UBERON:0002342,3.61e-08,3;UBERON:0002005,3.61e-08,3;UBERON:0005428,3.61e-08,3;UBERON:0005062,3.61e-08,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.856952953211411,1.98781686856452,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,1.47314292736834,0.711858403995515,0.745597783301202,4.54357159999104,6.34801104896998,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.19832511523858,1.83000241127451,0.251308704225729,0.869121600961382,0.255715457330331,0.83115217823824,1.78465389374533,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.841159794256509,0.514523061896422,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0,0,0.342745537829186,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0.592905254174298,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0.163934945376675,0,0.631016438832513,1.56175497718655,1.29254038639679,1.91175038362042,1.78238939265915,2.26461224631066,0.404810701674894,1.16902343164525,2.37172666767914,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p14@Gfra1 | |||
}} |
Latest revision as of 01:31, 26 September 2015
Short description: | p14@Gfra1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Gfra1_5end |
Coexpression cluster: | MCL_coexpression_mm9:263 |
Association with transcript: | 0bp_to_ENSMUST00000131877_5end |
EntrezGene: | Gfra1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.16e-29 | 9 |
neural cell | 3.22e-17 | 43 |
ectodermal cell | 8.58e-17 | 44 |
neurectodermal cell | 8.58e-17 | 44 |
neuron | 1.57e-15 | 33 |
neuronal stem cell | 1.57e-15 | 33 |
neuroblast | 1.57e-15 | 33 |
electrically signaling cell | 1.57e-15 | 33 |
electrically responsive cell | 5.97e-13 | 39 |
electrically active cell | 5.97e-13 | 39 |
insulating cell | 7.08e-13 | 2 |
myelin accumulating cell | 7.08e-13 | 2 |
Schwann cell | 7.08e-13 | 2 |
non-myelinating Schwann cell | 7.08e-13 | 2 |
myelinating Schwann cell;;Schwann cell | 7.08e-13 | 2 |
terminal Schwann cell | 7.08e-13 | 2 |
immature Schwann cell | 7.08e-13 | 2 |
Schwann cell precursor | 7.08e-13 | 2 |
embryonic cell | 5.84e-10 | 70 |
barrier cell | 7.12e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.91e-40 | 11 |
autonomic nervous system | 1.16e-29 | 9 |
parasympathetic nervous system | 1.21e-17 | 3 |
nervous system | 3.61e-17 | 75 |
ectoderm-derived structure | 3.66e-13 | 95 |
ectoderm | 3.66e-13 | 95 |
presumptive ectoderm | 3.66e-13 | 95 |
central nervous system | 4.98e-13 | 73 |
sympathetic nervous system | 2.37e-08 | 3 |
neural crest-derived structure | 3.61e-08 | 3 |
neural crest | 3.61e-08 | 3 |
enteric nervous system | 3.61e-08 | 3 |
vagal neural crest | 3.61e-08 | 3 |
neural fold | 3.61e-08 | 3 |