FFCP PHASE1:Mm9::chr1:134212777..134212788,+: Difference between revisions
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{{FFCP|EntrezGene=74137|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=35bp_to_ENSMUST00000128661_5end|description=CAGE_peak_2_at_Nuak2_5end|id=chr1:134212777..134212788,+|ontology_enrichment_celltype=CL:0002563!6.27e-09!9;CL:0002251!6.27e-09!9;CL:0000066!4.08e-07!25;CL:0000239!7.07e-07!6;CL:0000677!7.07e-07!6;CL:0000212!7.07e-07!6;CL:0000584!7.07e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,3.10e-22,9;CL:0002251,3.10e-22,9;CL:0000239,1.73e-16,6;CL:0000677,1.73e-16,6;CL:0000584,1.73e-16,6;CL:0000075,5.12e-14,7;CL:0000066,7.74e-13,25;CL:0002076,1.23e-12,15;CL:0000223,4.83e-09,20;CL:0000682,5.76e-09,3;CL:0002250,2.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.20e-16!43;UBERON:0000344!6.57e-14!15;UBERON:0001242!2.64e-12!13;UBERON:0000060!2.64e-12!13;UBERON:0001262!2.64e-12!13;UBERON:0004786!2.64e-12!13;UBERON:0005409!9.45e-11!59;UBERON:0003350!6.27e-09!9;UBERON:0004808!6.27e-09!9;UBERON:0001277!6.27e-09!9;UBERON:0001007!2.17e-07!128;UBERON:0001555!2.17e-07!128;UBERON:0007026!2.17e-07!128;UBERON:0004923!2.33e-07!24;UBERON:0004119!5.39e-07!130;UBERON:0000925!5.39e-07!130;UBERON:0006595!5.39e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-49,31;UBERON:0000344,2.82e-36,15;UBERON:0005409,1.42e-33,47;UBERON:0001242,9.60e-32,13;UBERON:0001262,9.60e-32,13;UBERON:0004786,9.60e-32,13;UBERON:0003350,3.10e-22,9;UBERON:0004808,3.10e-22,9;UBERON:0001277,3.10e-22,9;UBERON:0004923,2.53e-21,24;UBERON:0000485,7.16e-18,11;UBERON:0001007,3.07e-13,116;UBERON:0001555,3.07e-13,116;UBERON:0007026,3.07e-13,116;UBERON:0004119,6.65e-13,118;UBERON:0000925,6.65e-13,118;UBERON:0006595,6.65e-13,118;UBERON:0004921,3.02e-11,114;UBERON:0002108,1.56e-10,4;UBERON:0000331,1.75e-08,3;UBERON:0002116,1.75e-08,3;UBERON:0001204,1.75e-08,3;UBERON:0001168,1.75e-08,3|phase1_expression=0,19.8915982354436,20.4749657725291,14.5182821427278,22.0394121176393,10.2406355866253,10.7461814673942,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0,0.0992909512008853,0,8.47959840805055,8.02932483735095,16.0784949952206,15.5074318617267,10.3426191689227,11.4014051673824,9.32511480111744,8.42575940490158,0,0,0,4.04392267651784,1.99481574430191,4.28755648150975,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,0,1.30815093828268,0.878744730937887,1.1665793944457,0.419959264876088,0,0.503347818173209,0,0,0.257259436035947,0,0,0,0,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0,1.7127581957859,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.988779870937496,0,0,0.161766849947409,0,0,11.1835056730873,0,0,8.43008282188352,0.359445373517761,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,5.02456076660734,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,1.71203063501303,8.54152310780121,2.63518327558417,5.02670417600539,4.57599885694647,2.53453313254856,7.19055526923377,6.70027954611552,7.36822711041159,0,0,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.616985819609003,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,1.4473305640901,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0,0.258717367565509,0,0.354680467284547,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,10.628427809927,0,0,0,0.165458490457098,0,0.387479470433193,0.168956125490778,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.644613162144895,0,0,0|short_description=p2@Nuak2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74137 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=35bp_to_ENSMUST00000128661_5end | |||
|cluster_id=chr1:134212777..134212788,+ | |||
|description=CAGE_peak_2_at_Nuak2_5end | |||
|id=chr1:134212777..134212788,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.27e-09!9;CL:0002251!6.27e-09!9;CL:0000066!4.08e-07!25;CL:0000239!7.07e-07!6;CL:0000677!7.07e-07!6;CL:0000212!7.07e-07!6;CL:0000584!7.07e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.10e-22,9;CL:0002251,3.10e-22,9;CL:0000239,1.73e-16,6;CL:0000677,1.73e-16,6;CL:0000584,1.73e-16,6;CL:0000075,5.12e-14,7;CL:0000066,7.74e-13,25;CL:0002076,1.23e-12,15;CL:0000223,4.83e-09,20;CL:0000682,5.76e-09,3;CL:0002250,2.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.20e-16!43;UBERON:0000344!6.57e-14!15;UBERON:0001242!2.64e-12!13;UBERON:0000060!2.64e-12!13;UBERON:0001262!2.64e-12!13;UBERON:0004786!2.64e-12!13;UBERON:0005409!9.45e-11!59;UBERON:0003350!6.27e-09!9;UBERON:0004808!6.27e-09!9;UBERON:0001277!6.27e-09!9;UBERON:0001007!2.17e-07!128;UBERON:0001555!2.17e-07!128;UBERON:0007026!2.17e-07!128;UBERON:0004923!2.33e-07!24;UBERON:0004119!5.39e-07!130;UBERON:0000925!5.39e-07!130;UBERON:0006595!5.39e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-49,31;UBERON:0000344,2.82e-36,15;UBERON:0005409,1.42e-33,47;UBERON:0001242,9.60e-32,13;UBERON:0001262,9.60e-32,13;UBERON:0004786,9.60e-32,13;UBERON:0003350,3.10e-22,9;UBERON:0004808,3.10e-22,9;UBERON:0001277,3.10e-22,9;UBERON:0004923,2.53e-21,24;UBERON:0000485,7.16e-18,11;UBERON:0001007,3.07e-13,116;UBERON:0001555,3.07e-13,116;UBERON:0007026,3.07e-13,116;UBERON:0004119,6.65e-13,118;UBERON:0000925,6.65e-13,118;UBERON:0006595,6.65e-13,118;UBERON:0004921,3.02e-11,114;UBERON:0002108,1.56e-10,4;UBERON:0000331,1.75e-08,3;UBERON:0002116,1.75e-08,3;UBERON:0001204,1.75e-08,3;UBERON:0001168,1.75e-08,3 | |||
|phase1_expression=0,19.8915982354436,20.4749657725291,14.5182821427278,22.0394121176393,10.2406355866253,10.7461814673942,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0,0.0992909512008853,0,8.47959840805055,8.02932483735095,16.0784949952206,15.5074318617267,10.3426191689227,11.4014051673824,9.32511480111744,8.42575940490158,0,0,0,4.04392267651784,1.99481574430191,4.28755648150975,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,0,1.30815093828268,0.878744730937887,1.1665793944457,0.419959264876088,0,0.503347818173209,0,0,0.257259436035947,0,0,0,0,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0,1.7127581957859,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.988779870937496,0,0,0.161766849947409,0,0,11.1835056730873,0,0,8.43008282188352,0.359445373517761,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,5.02456076660734,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,1.71203063501303,8.54152310780121,2.63518327558417,5.02670417600539,4.57599885694647,2.53453313254856,7.19055526923377,6.70027954611552,7.36822711041159,0,0,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.616985819609003,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,1.4473305640901,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0,0.258717367565509,0,0.354680467284547,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,10.628427809927,0,0,0,0.165458490457098,0,0.387479470433193,0.168956125490778,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.644613162144895,0,0,0 | |||
|short_description=p2@Nuak2 | |||
}} |
Latest revision as of 09:03, 26 September 2015
Short description: | p2@Nuak2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nuak2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 35bp_to_ENSMUST00000128661_5end |
EntrezGene: | Nuak2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.10e-22 | 9 |
epithelial cell of alimentary canal | 3.10e-22 | 9 |
brush border epithelial cell | 1.73e-16 | 6 |
gut absorptive cell | 1.73e-16 | 6 |
enterocyte | 1.73e-16 | 6 |
columnar/cuboidal epithelial cell | 5.12e-14 | 7 |
epithelial cell | 7.74e-13 | 25 |
endo-epithelial cell | 1.23e-12 | 15 |
endodermal cell | 4.83e-09 | 20 |
M cell of gut | 5.76e-09 | 3 |
intestinal crypt stem cell | 2.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.14e-49 | 31 |
mucosa | 2.82e-36 | 15 |
gastrointestinal system | 1.42e-33 | 47 |
intestinal mucosa | 9.60e-32 | 13 |
wall of intestine | 9.60e-32 | 13 |
gastrointestinal system mucosa | 9.60e-32 | 13 |
epithelium of mucosa | 3.10e-22 | 9 |
gastrointestinal system epithelium | 3.10e-22 | 9 |
intestinal epithelium | 3.10e-22 | 9 |
organ component layer | 2.53e-21 | 24 |
simple columnar epithelium | 7.16e-18 | 11 |
digestive system | 3.07e-13 | 116 |
digestive tract | 3.07e-13 | 116 |
primitive gut | 3.07e-13 | 116 |
endoderm-derived structure | 6.65e-13 | 118 |
endoderm | 6.65e-13 | 118 |
presumptive endoderm | 6.65e-13 | 118 |
subdivision of digestive tract | 3.02e-11 | 114 |
small intestine | 1.56e-10 | 4 |
ileal mucosa | 1.75e-08 | 3 |
ileum | 1.75e-08 | 3 |
mucosa of small intestine | 1.75e-08 | 3 |
wall of small intestine | 1.75e-08 | 3 |