FFCP PHASE1:Mm9::chr1:137746674..137746687,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=10|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:137746674..137746687,+|id=chr1:137746674..137746687,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,9.18e-09,3;CL:0002202,9.18e-09,3;CL:0000069,9.18e-09,3;CL:0002632,9.18e-09,3;CL:0002368,9.18e-09,3;CL:0000307,9.18e-09,3;CL:0000377,9.18e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.37e-17!18;UBERON:0000948!1.37e-17!18;UBERON:0005498!1.37e-17!18;UBERON:0004140!1.37e-17!18;UBERON:0009881!1.37e-17!18;UBERON:0004141!1.37e-17!18;UBERON:0003084!1.37e-17!18;UBERON:0007005!1.37e-17!18;UBERON:0004139!1.37e-17!18;UBERON:0004291!1.37e-17!18;UBERON:0004535!4.19e-12!23;UBERON:0001009!4.19e-12!23;UBERON:0005178!3.03e-10!17;UBERON:0005181!3.03e-10!17;UBERON:0002224!3.03e-10!17;UBERON:0000915!3.03e-10!17;UBERON:0008947!3.03e-10!17;UBERON:0003258!3.03e-10!17;UBERON:0003103!5.71e-10!43;UBERON:0004872!6.94e-08!33;UBERON:0002048!8.47e-08!14;UBERON:0000117!8.47e-08!14;UBERON:0000171!8.47e-08!14;UBERON:0000170!8.47e-08!14;UBERON:0005597!8.47e-08!14;UBERON:0000118!8.47e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.52e-39,18;UBERON:0000948,1.52e-39,18;UBERON:0005498,1.52e-39,18;UBERON:0004140,1.52e-39,18;UBERON:0009881,1.52e-39,18;UBERON:0004141,1.52e-39,18;UBERON:0003084,1.52e-39,18;UBERON:0007005,1.52e-39,18;UBERON:0004139,1.52e-39,18;UBERON:0004291,1.52e-39,18;UBERON:0004535,3.85e-30,23;UBERON:0001009,3.85e-30,23;UBERON:0003103,4.73e-23,43;UBERON:0004872,7.00e-20,33;UBERON:0003914,7.34e-13,47;UBERON:0003126,9.18e-09,3;UBERON:0001005,9.18e-09,3;UBERON:0007196,9.18e-09,3;UBERON:0001558,9.18e-09,3|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0.68487187290202,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,4.12537673821954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.38140145112336,2.02687892380079,2.52762222507392,0,0,0,0,0.608930956624282,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0.136072998302656,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,3.93538967817454,16.1822981386956,18.5463923304845,14.2046841351126,41.910781362197,53.5306881719203,61.8540293036085,65.7269833429067,40.7511044861422,43.6083602270723,100.798822944564,65.5035981130514,108.187990694746,73.1101883919199,74.2161495744856,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,1.22190796707189,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,0.339490171550376,0.234690248288502,0.837531287209079,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,1.14704320301017,0.863424909329478,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.51968329191118,0.179026695667481,0.39736270956253,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.972426868273176,0.419226325255965,0,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0,0.754505365544305,1.03005658216871,0.320125762024346,0.918967503289812,0,1.62238056322798,1.15745532278223,2.88460130562315,0.294397840268795,0.685738504770831,1.06485483695602,1.1921809497366,1.74415699958794,1.41164070622996,1.69229215783353,1.46342378298218,1.8414879800649,0.679020569229309,0,0.593175090620871,0.492522411877817,0.409231043169689,1.54936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.765153328275374,0,0.231867835620421|short_description=p@chr1:137746674..137746687,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:137746674..137746687,+ | |||
|description=CAGE_peak_at_chr1:137746674..137746687,+ | |||
|id=chr1:137746674..137746687,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,9.18e-09,3;CL:0002202,9.18e-09,3;CL:0000069,9.18e-09,3;CL:0002632,9.18e-09,3;CL:0002368,9.18e-09,3;CL:0000307,9.18e-09,3;CL:0000377,9.18e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.37e-17!18;UBERON:0000948!1.37e-17!18;UBERON:0005498!1.37e-17!18;UBERON:0004140!1.37e-17!18;UBERON:0009881!1.37e-17!18;UBERON:0004141!1.37e-17!18;UBERON:0003084!1.37e-17!18;UBERON:0007005!1.37e-17!18;UBERON:0004139!1.37e-17!18;UBERON:0004291!1.37e-17!18;UBERON:0004535!4.19e-12!23;UBERON:0001009!4.19e-12!23;UBERON:0005178!3.03e-10!17;UBERON:0005181!3.03e-10!17;UBERON:0002224!3.03e-10!17;UBERON:0000915!3.03e-10!17;UBERON:0008947!3.03e-10!17;UBERON:0003258!3.03e-10!17;UBERON:0003103!5.71e-10!43;UBERON:0004872!6.94e-08!33;UBERON:0002048!8.47e-08!14;UBERON:0000117!8.47e-08!14;UBERON:0000171!8.47e-08!14;UBERON:0000170!8.47e-08!14;UBERON:0005597!8.47e-08!14;UBERON:0000118!8.47e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.52e-39,18;UBERON:0000948,1.52e-39,18;UBERON:0005498,1.52e-39,18;UBERON:0004140,1.52e-39,18;UBERON:0009881,1.52e-39,18;UBERON:0004141,1.52e-39,18;UBERON:0003084,1.52e-39,18;UBERON:0007005,1.52e-39,18;UBERON:0004139,1.52e-39,18;UBERON:0004291,1.52e-39,18;UBERON:0004535,3.85e-30,23;UBERON:0001009,3.85e-30,23;UBERON:0003103,4.73e-23,43;UBERON:0004872,7.00e-20,33;UBERON:0003914,7.34e-13,47;UBERON:0003126,9.18e-09,3;UBERON:0001005,9.18e-09,3;UBERON:0007196,9.18e-09,3;UBERON:0001558,9.18e-09,3 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0,0.68487187290202,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,4.12537673821954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.38140145112336,2.02687892380079,2.52762222507392,0,0,0,0,0.608930956624282,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0.136072998302656,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,3.93538967817454,16.1822981386956,18.5463923304845,14.2046841351126,41.910781362197,53.5306881719203,61.8540293036085,65.7269833429067,40.7511044861422,43.6083602270723,100.798822944564,65.5035981130514,108.187990694746,73.1101883919199,74.2161495744856,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,1.22190796707189,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,0.339490171550376,0.234690248288502,0.837531287209079,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,1.14704320301017,0.863424909329478,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.51968329191118,0.179026695667481,0.39736270956253,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.972426868273176,0.419226325255965,0,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0,0.754505365544305,1.03005658216871,0.320125762024346,0.918967503289812,0,1.62238056322798,1.15745532278223,2.88460130562315,0.294397840268795,0.685738504770831,1.06485483695602,1.1921809497366,1.74415699958794,1.41164070622996,1.69229215783353,1.46342378298218,1.8414879800649,0.679020569229309,0,0.593175090620871,0.492522411877817,0.409231043169689,1.54936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.765153328275374,0,0.231867835620421 | |||
|short_description=p@chr1:137746674..137746687,+ | |||
}} |
Latest revision as of 21:17, 4 August 2015
Short description: | p@chr1:137746674..137746687, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:137746674..137746687, + |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 9.18e-09 | 3 |
epithelial cell of tracheobronchial tree | 9.18e-09 | 3 |
branched duct epithelial cell | 9.18e-09 | 3 |
epithelial cell of lower respiratory tract | 9.18e-09 | 3 |
respiratory epithelial cell | 9.18e-09 | 3 |
tracheal epithelial cell | 9.18e-09 | 3 |
tracheoblast | 9.18e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.52e-39 | 18 |
heart | 1.52e-39 | 18 |
primitive heart tube | 1.52e-39 | 18 |
primary heart field | 1.52e-39 | 18 |
anterior lateral plate mesoderm | 1.52e-39 | 18 |
heart tube | 1.52e-39 | 18 |
heart primordium | 1.52e-39 | 18 |
cardiac mesoderm | 1.52e-39 | 18 |
cardiogenic plate | 1.52e-39 | 18 |
heart rudiment | 1.52e-39 | 18 |
cardiovascular system | 3.85e-30 | 23 |
circulatory system | 3.85e-30 | 23 |
compound organ | 4.73e-23 | 43 |
splanchnic layer of lateral plate mesoderm | 7.00e-20 | 33 |
epithelial tube | 7.34e-13 | 47 |
trachea | 9.18e-09 | 3 |
respiratory airway | 9.18e-09 | 3 |
tracheobronchial tree | 9.18e-09 | 3 |
lower respiratory tract | 9.18e-09 | 3 |