FFCP PHASE1:Mm9::chr1:99873638..99873690,-: Difference between revisions
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{{FFCP|EntrezGene=18484|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=0bp_to_ENSMUST00000159428_5end|description=CAGE_peak_4_at_Pam_5end|id=chr1:99873638..99873690,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.99e-16!122;UBERON:0000025!8.37e-16!114;UBERON:0004535!1.79e-15!23;UBERON:0001009!1.79e-15!23;UBERON:0007100!5.62e-13!18;UBERON:0000948!5.62e-13!18;UBERON:0005498!5.62e-13!18;UBERON:0004140!5.62e-13!18;UBERON:0009881!5.62e-13!18;UBERON:0004141!5.62e-13!18;UBERON:0003084!5.62e-13!18;UBERON:0007005!5.62e-13!18;UBERON:0004139!5.62e-13!18;UBERON:0004291!5.62e-13!18;UBERON:0004872!1.18e-10!33;UBERON:0003914!2.59e-10!47;UBERON:0000468!3.32e-10!333;UBERON:0000922!1.32e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.97e-16,122;UBERON:0004535,1.60e-15,23;UBERON:0001009,1.60e-15,23;UBERON:0000025,1.68e-15,114;UBERON:0007100,5.13e-13,18;UBERON:0000948,5.13e-13,18;UBERON:0005498,5.13e-13,18;UBERON:0004140,5.13e-13,18;UBERON:0009881,5.13e-13,18;UBERON:0004141,5.13e-13,18;UBERON:0003084,5.13e-13,18;UBERON:0007005,5.13e-13,18;UBERON:0004139,5.13e-13,18;UBERON:0004291,5.13e-13,18;UBERON:0004872,1.48e-10,33;UBERON:0003914,3.40e-10,47;UBERON:0010314,4.18e-10,92|phase1_expression=7.36684696682052,0.348975407639361,0,0,0,4.02910252588535,3.73780224952841,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,10.0351082378262,0,0,1.27993938234725,0.68822784320151,0,1.29228598847722,0.646413698057667,0.190023419456374,0.252030129759931,0.886922042621219,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0,0,0,29.0821649523584,33.9612719585374,30.2852141066775,2.34717403304412,2.8343270329458,10.9843091367236,13.9989527333484,4.61955191363696,2.87505128729943,0,0,0,29.070316272062,28.3668105539369,53.1142255045766,2.42779753031517,1.5869729378161,2.53532561402472,6.77689064138264,3.55717918444456,1.7997994345628,3.9554654502679,0,2.39680088414724,1.92109152660777,5.39185984004084,3.64516033495565,6.73039876324422,3.99911378165325,5.52171352379034,3.42974237801871,2.20444583341944,2.75765635983006,5.50579404996943,15.9609172606485,14.4390141260869,1.71452174049252,1.64677758484337,5.2091337055676,11.1673199600552,24.1987922313622,23.3781319098519,3.24091444021034,4.12877874317399,3.35519002485541,1.74170244666323,9.29530189313462,18.8411917656091,24.9522924324602,0.679971333707751,0.539703191637817,3.24888208723835,4.48026887097336,8.00533194750986,2.72688516124892,4.1565760736459,2.47337702157238,1.54927761754349,3.84979432242953,7.64415719119937,7.11066703153331,5.41227602528035,4.30711771307668,8.08839112023653,5.48082622651488,2.07150306917737,38.8918404349841,6.59244241711316,7.30717147949139,9.22461989024234,11.9070886036572,19.519725384527,20.4836543867371,5.19109432242185,23.1358971071859,0.884610551949874,7.60304194752823,7.28777010919299,4.84875253135222,9.31958806090611,2.34224637609238,2.30391377494801,5.36459815938042,0,0,0,16.4769703345305,9.15001205637253,0.502617408451458,25.2045264278801,17.3886510984625,6.64921742590592,7.13861557498134,12.220723662038,6.34475550111474,2.27450482590307,15.5726973355991,1.04096354370163,1.83921683546778,1.80062129805349,4.9732589885786,5.98721192531685,3.84341160854549,5.99691037182265,10.8655415710387,3.44908788692548,1.70195472151037,2.11141348996739,2.84954452155847,6.95118123063995,6.96504333044333,6.1734640922383,13.5343301436575,0,0,0,65.2446183486831,56.9898325754064,84.809230948138,82.6239127192384,105.662392448356,108.29551324694,111.383759535445,117.503749813033,145.022555220025,103.343585745666,76.3378707967793,86.3382821663364,66.0823943162502,73.3297385072109,82.0001218625872,13.6688466566683,2.6755199218614,1.98251269790279,3.17340679996253,4.69234151177515,3.94802342162745,5.41243337552792,4.84040459096022,4.44756087689741,5.1360919050391,3.32170343081158,3.62337700392824,6.53471542880701,6.36660710531683,6.04388670069272,1.79763881730844,9.51007419448655,7.76650965692032,1.13800740571849,2.97046132785295,0,3.66572390121566,2.71533482034676,4.55882829287071,7.14572869504107,6.05201606716369,7.53593893638599,7.03363834354263,10.3758419480502,5.00535317148282,2.75182593158484,2.69834534861824,3.44862206360455,4.3411888755435,5.34714288740982,7.19240343627027,9.07957269940198,8.23684239564244,15.814502718009,10.0478055870496,12.1694692514679,10.3557339958316,5.9201146462231,7.23665282045051,23.833161531492,13.6433816474749,6.84452901056509,6.95954851678271,3.98973422090454,8.87783164441623,14.0445748122748,14.0496226457615,13.24135210492,13.9522754478728,28.0640392837177,16.0586048421423,17.6138681503213,18.0811323226889,1.50791283939272,1.63171705145613,2.95058563811422,1.93155722413313,13.0045977890111,7.14991288212439,1.14754461763673,8.33154059774431,4.73262329124385,4.68526493155966,2.15423397732799,4.77937595905104,7.35235624471901,9.90767857760913,4.04810701674894,9.35218745316198,10.27748222660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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18484 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000159428_5end | |||
|cluster_id=chr1:99873638..99873690,- | |||
|description=CAGE_peak_4_at_Pam_5end | |||
|id=chr1:99873638..99873690,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.99e-16!122;UBERON:0000025!8.37e-16!114;UBERON:0004535!1.79e-15!23;UBERON:0001009!1.79e-15!23;UBERON:0007100!5.62e-13!18;UBERON:0000948!5.62e-13!18;UBERON:0005498!5.62e-13!18;UBERON:0004140!5.62e-13!18;UBERON:0009881!5.62e-13!18;UBERON:0004141!5.62e-13!18;UBERON:0003084!5.62e-13!18;UBERON:0007005!5.62e-13!18;UBERON:0004139!5.62e-13!18;UBERON:0004291!5.62e-13!18;UBERON:0004872!1.18e-10!33;UBERON:0003914!2.59e-10!47;UBERON:0000468!3.32e-10!333;UBERON:0000922!1.32e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.97e-16,122;UBERON:0004535,1.60e-15,23;UBERON:0001009,1.60e-15,23;UBERON:0000025,1.68e-15,114;UBERON:0007100,5.13e-13,18;UBERON:0000948,5.13e-13,18;UBERON:0005498,5.13e-13,18;UBERON:0004140,5.13e-13,18;UBERON:0009881,5.13e-13,18;UBERON:0004141,5.13e-13,18;UBERON:0003084,5.13e-13,18;UBERON:0007005,5.13e-13,18;UBERON:0004139,5.13e-13,18;UBERON:0004291,5.13e-13,18;UBERON:0004872,1.48e-10,33;UBERON:0003914,3.40e-10,47;UBERON:0010314,4.18e-10,92 | |||
|phase1_expression=7.36684696682052,0.348975407639361,0,0,0,4.02910252588535,3.73780224952841,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,10.0351082378262,0,0,1.27993938234725,0.68822784320151,0,1.29228598847722,0.646413698057667,0.190023419456374,0.252030129759931,0.886922042621219,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0,0,0,29.0821649523584,33.9612719585374,30.2852141066775,2.34717403304412,2.8343270329458,10.9843091367236,13.9989527333484,4.61955191363696,2.87505128729943,0,0,0,29.070316272062,28.3668105539369,53.1142255045766,2.42779753031517,1.5869729378161,2.53532561402472,6.77689064138264,3.55717918444456,1.7997994345628,3.9554654502679,0,2.39680088414724,1.92109152660777,5.39185984004084,3.64516033495565,6.73039876324422,3.99911378165325,5.52171352379034,3.42974237801871,2.20444583341944,2.75765635983006,5.50579404996943,15.9609172606485,14.4390141260869,1.71452174049252,1.64677758484337,5.2091337055676,11.1673199600552,24.1987922313622,23.3781319098519,3.24091444021034,4.12877874317399,3.35519002485541,1.74170244666323,9.29530189313462,18.8411917656091,24.9522924324602,0.679971333707751,0.539703191637817,3.24888208723835,4.48026887097336,8.00533194750986,2.72688516124892,4.1565760736459,2.47337702157238,1.54927761754349,3.84979432242953,7.64415719119937,7.11066703153331,5.41227602528035,4.30711771307668,8.08839112023653,5.48082622651488,2.07150306917737,38.8918404349841,6.59244241711316,7.30717147949139,9.22461989024234,11.9070886036572,19.519725384527,20.4836543867371,5.19109432242185,23.1358971071859,0.884610551949874,7.60304194752823,7.28777010919299,4.84875253135222,9.31958806090611,2.34224637609238,2.30391377494801,5.36459815938042,0,0,0,16.4769703345305,9.15001205637253,0.502617408451458,25.2045264278801,17.3886510984625,6.64921742590592,7.13861557498134,12.220723662038,6.34475550111474,2.27450482590307,15.5726973355991,1.04096354370163,1.83921683546778,1.80062129805349,4.9732589885786,5.98721192531685,3.84341160854549,5.99691037182265,10.8655415710387,3.44908788692548,1.70195472151037,2.11141348996739,2.84954452155847,6.95118123063995,6.96504333044333,6.1734640922383,13.5343301436575,0,0,0,65.2446183486831,56.9898325754064,84.809230948138,82.6239127192384,105.662392448356,108.29551324694,111.383759535445,117.503749813033,145.022555220025,103.343585745666,76.3378707967793,86.3382821663364,66.0823943162502,73.3297385072109,82.0001218625872,13.6688466566683,2.6755199218614,1.98251269790279,3.17340679996253,4.69234151177515,3.94802342162745,5.41243337552792,4.84040459096022,4.44756087689741,5.1360919050391,3.32170343081158,3.62337700392824,6.53471542880701,6.36660710531683,6.04388670069272,1.79763881730844,9.51007419448655,7.76650965692032,1.13800740571849,2.97046132785295,0,3.66572390121566,2.71533482034676,4.55882829287071,7.14572869504107,6.05201606716369,7.53593893638599,7.03363834354263,10.3758419480502,5.00535317148282,2.75182593158484,2.69834534861824,3.44862206360455,4.3411888755435,5.34714288740982,7.19240343627027,9.07957269940198,8.23684239564244,15.814502718009,10.0478055870496,12.1694692514679,10.3557339958316,5.9201146462231,7.23665282045051,23.833161531492,13.6433816474749,6.84452901056509,6.95954851678271,3.98973422090454,8.87783164441623,14.0445748122748,14.0496226457615,13.24135210492,13.9522754478728,28.0640392837177,16.0586048421423,17.6138681503213,18.0811323226889,1.50791283939272,1.63171705145613,2.95058563811422,1.93155722413313,13.0045977890111,7.14991288212439,1.14754461763673,8.33154059774431,4.73262329124385,4.68526493155966,2.15423397732799,4.77937595905104,7.35235624471901,9.90767857760913,4.04810701674894,9.35218745316198,10.2774822266096,6.74774764485795,9.65192579416227,8.54714897602825,17.7546785695398,9.07335676348945,31.8588332015911,8.98288353773431,10.2790009368015,15.4656165399836,19.1946230372502,23.9799415396263,13.1798429515793,25.0838273339479,19.6073558111597,26.2310509086727,21.0837217149998,35.0660847043835,46.9806655940227,0.720244376125241,0.646793418913773,4.71541477069503,7.80297028026004,9.45354733290974,10.5311373185357,17.0500371504176,50.9237606498251,30.9274823461177,5.73373834942901,5.60613260001032,5.16686165426898,4.40284351975538,3.22305328808468,3.28281799490123,1.45740418314925,8.34413859047294,1.36696704638282,2.68302928352189,2.03713980106683,1.50694765603753,0.820165366326151,1.14389086603261,0,0.419854356970974,0,3.81868247206045,5.3777118908793,6.30290348093231,6.69633113095168,4.80903080833278,8.29777742235475,7.01294601201068,9.83576123131498,10.7319936213452,4.01806417204558,37.9016980983025,0,6.87776111802302,5.62558867554132,8.5558522871381,6.58715099736429,7.26511339610346,11.3836521486381,14.7130954873664,11.1150905091254,2.65742532908607,2.88030006257865,1.89606672376907,4.86540516696394,3.3894615864393,2.85825810551149,2.68540043501222,5.36439657909415,1.44234539423963,1.03382669022204,1.81739609906666,0.685861259894999,0.705783295957884,0.974578807397524,0.769694733122636,0.701261413089414,12.92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| |||
|short_description=p4@Pam | |||
}} |
Latest revision as of 20:47, 1 October 2015
Short description: | p4@Pam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pam_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000159428_5end |
EntrezGene: | Pam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.97e-16 | 122 |
cardiovascular system | 1.60e-15 | 23 |
circulatory system | 1.60e-15 | 23 |
tube | 1.68e-15 | 114 |
primary circulatory organ | 5.13e-13 | 18 |
heart | 5.13e-13 | 18 |
primitive heart tube | 5.13e-13 | 18 |
primary heart field | 5.13e-13 | 18 |
anterior lateral plate mesoderm | 5.13e-13 | 18 |
heart tube | 5.13e-13 | 18 |
heart primordium | 5.13e-13 | 18 |
cardiac mesoderm | 5.13e-13 | 18 |
cardiogenic plate | 5.13e-13 | 18 |
heart rudiment | 5.13e-13 | 18 |
splanchnic layer of lateral plate mesoderm | 1.48e-10 | 33 |
epithelial tube | 3.40e-10 | 47 |
structure with developmental contribution from neural crest | 4.18e-10 | 92 |