FFCP PHASE1:Hg19::chr8:110656891..110656902,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26011 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=105bp_to_ENST00000531284_5end | |||
|cluster_id=chr8:110656891..110656902,- | |||
|description=CAGE_peak_17_at_SYBU_5end | |||
|id=chr8:110656891..110656902,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;4.27e-34;1!CL:0000164;4.27e-34;1!CL:0000502;4.27e-34;1!CL:0000172;4.27e-34;1!CL:0000173;4.27e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.85e-34,1;CL:0000164,9.85e-34,1;CL:0000502,9.85e-34,1;CL:0000172,9.85e-34,1;CL:0000173,9.85e-34,1;CL:0002351,9.85e-34,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-44;3!CL:0002351;4.27e-34;1 | |||
|ontology_enrichment_disease=DOID:0050687!7.89e-08!143;DOID:305!3.04e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4430;4.27e-34;1!DOID:169;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.85e-34,1;DOID:169,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.22e-20!115;UBERON:0001049!4.11e-20!57;UBERON:0005068!4.11e-20!57;UBERON:0006241!4.11e-20!57;UBERON:0007135!4.11e-20!57;UBERON:0005743!1.04e-18!86;UBERON:0002619!1.99e-18!22;UBERON:0001950!2.63e-18!20;UBERON:0001017!6.30e-18!82;UBERON:0000955!7.64e-18!69;UBERON:0006238!7.64e-18!69;UBERON:0000073!1.34e-17!94;UBERON:0001016!1.34e-17!94;UBERON:0002616!1.58e-17!59;UBERON:0003080!1.82e-17!42;UBERON:0001869!2.24e-17!32;UBERON:0001893!2.52e-17!34;UBERON:0003075!1.38e-16!86;UBERON:0007284!1.38e-16!86;UBERON:0000033!2.25e-16!123;UBERON:0002780!2.44e-16!41;UBERON:0001890!2.44e-16!41;UBERON:0006240!2.44e-16!41;UBERON:0002346!2.83e-16!90;UBERON:0002791!3.03e-16!33;UBERON:0002020!5.03e-16!34;UBERON:0003528!5.03e-16!34;UBERON:0000153!7.33e-16!129;UBERON:0007811!7.33e-16!129;UBERON:0000956!1.33e-15!25;UBERON:0000203!1.33e-15!25;UBERON:0003056!8.18e-15!61;UBERON:0000924!6.68e-11!173;UBERON:0006601!6.68e-11!173;UBERON:0004121!6.75e-11!169;UBERON:0001872!1.19e-08!5;UBERON:0000481!1.55e-08!347;UBERON:0000064!4.39e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;4.27e-34;1!UBERON:0009899;4.27e-34;1!UBERON:0002037;6.06e-23;6!UBERON:0002680;1.13e-15;9!UBERON:0001895;1.13e-15;9!UBERON:0004733;5.08e-12;12!UBERON:0002028;5.08e-12;12!UBERON:0004732;3.56e-11;13!UBERON:0000955;1.16e-08;68!UBERON:0002021;6.33e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,3.61e-34,1;UBERON:0009899,3.61e-34,1;UBERON:0002037,6.07e-23,6;UBERON:0006215,6.07e-23,6;UBERON:0002680,1.13e-15,9;UBERON:0001895,1.13e-15,9;UBERON:0010092,1.13e-15,9;UBERON:0004733,5.08e-12,12;UBERON:0002028,5.08e-12,12;UBERON:0007277,5.08e-12,12;UBERON:0004732,3.56e-11,13;UBERON:0003076,8.10e-10,15;UBERON:0003057,8.10e-10,15;UBERON:0000955,3.92e-08,68;UBERON:0006238,3.92e-08,68;UBERON:0002021,6.13e-08,5;UBERON:0001017,6.23e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.649376687132959,1.99613798001194,0,0.0874599999961957,0.724999575434793,0.910347586283997,0,0.236387681767936,0.344743373241465,0,0,0,0.241192877250816,0,1.43753037910592,1.18219047581419,0.438770794307945,0.435753854075961,0.41827123283581,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0.146178634172371,0,0,0,0.225980740780532,0,0,0.696418755514666,0.195551382734803,0,0.213452994739353,0,0.432271251462318,0,0.514784993585894,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0.0846733320657845,0,0.408610218334727,0,0,0,0,0,0.668245123238271,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.226624183040251,0,0,0,0.52893040697076,0.171086837884329,0,0.106787412567695,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0,0.449604575675217,0,0.319267718114302,0.205116364240755,0.252071696221718,1.31398779682014,0.322951291263702,0,0.294443155503077,0.11796972334774,0.183428598521679,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0,0,0.405225507710368,0.781078098613847,0.413373593002368,0.507326481551255,0.546974809018219,0.548257766857182,0.496211178389294,0.175871244359621,0.511049710558381,0,0,0,0.455324382702595,0,0.115233987555779,0,0.611727596791485,0.72350050919134,0.118193840883968,0.111231401892069,0,0.157115589916002,0.280272163313789,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0.109940516745429,0.150962843566674,0.0771741581079447,0,0,0,1.17838273550813,0,0,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.134704106029175,0,0,0.162806537221949,0.106727345877715,0,0.179650404213174,0,0.244482888365733,0,0,0,0 | |||
|short_description=p17@SYBU | |||
}} |
Latest revision as of 03:56, 25 September 2015
Short description: | p17@SYBU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SYBU_5end |
Coexpression cluster: | NA |
Association with transcript: | 105bp_to_ENST00000531284_5end |
EntrezGene: | SYBU |
HGNC: | 26011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.85e-34 | 1 |
enteroendocrine cell | 9.85e-34 | 1 |
type D enteroendocrine cell | 9.85e-34 | 1 |
somatostatin secreting cell | 9.85e-34 | 1 |
pancreatic D cell | 9.85e-34 | 1 |
progenitor cell of endocrine pancreas | 9.85e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 3.61e-34 | 1 |
pole of cerebral hemisphere | 3.61e-34 | 1 |
cerebellum | 6.07e-23 | 6 |
rhombic lip | 6.07e-23 | 6 |
regional part of metencephalon | 1.13e-15 | 9 |
metencephalon | 1.13e-15 | 9 |
future metencephalon | 1.13e-15 | 9 |
segmental subdivision of hindbrain | 5.08e-12 | 12 |
hindbrain | 5.08e-12 | 12 |
presumptive hindbrain | 5.08e-12 | 12 |
segmental subdivision of nervous system | 3.56e-11 | 13 |
posterior neural tube | 8.10e-10 | 15 |
chordal neural plate | 8.10e-10 | 15 |
brain | 3.92e-08 | 68 |
future brain | 3.92e-08 | 68 |
occipital lobe | 6.13e-08 | 5 |
central nervous system | 6.23e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.85e-34 | 1 |
neuroendocrine tumor | 9.49e-07 | 6 |