FFCP PHASE1:Hg19::chr8:67039422..67039433,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14215 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BYV6 | |||
|association_with_transcript=144bp_to_ENST00000276573,ENST00000350034,NM_033058,NM_184085,NM_184086,NM_184087,uc003xvu.2,uc003xvv.2,uc003xvw.2,uc003xvx.2_5end | |||
|cluster_id=chr8:67039422..67039433,+ | |||
|description=CAGE_peak_4_at_TRIM55_5end | |||
|id=chr8:67039422..67039433,+ | |||
|ontology_enrichment_celltype=CL:0000515!2.23e-12!4;CL:0002620!8.89e-10!23;CL:0000188!1.28e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000056;4.94e-21;4!CL:0000515;3.25e-13;3!CL:0000680;2.81e-12;7!CL:0000228;2.87e-10;1!CL:0002372;2.87e-10;1!CL:0002149;5.58e-07;6!CL:0002255;5.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.51e-21,4;CL:0000228,2.74e-10,1;CL:0002372,2.74e-10,1;CL:0002149,5.75e-07,6;CL:0002255,5.75e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;4.94e-21;4!UBERON:0004140;6.73e-11;1!UBERON:0000358;1.24e-10;1!UBERON:0005062;2.68e-10;4!UBERON:0007284;2.68e-10;4!UBERON:0010227;2.87e-10;1 | |||
|ontology_enrichment_disease=DOID:17!3.15e-09!5;DOID:450!3.15e-09!5;DOID:66!3.15e-09!5;DOID:423!3.15e-09!5;DOID:0080000!3.15e-09!5;DOID:11722!3.15e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:3001;5.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.75e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003103!3.37e-11!69;UBERON:0007100!7.74e-09!27;UBERON:0001630!5.11e-07!2;UBERON:0005090!5.11e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.35e-14;16!UBERON:0002036;3.35e-14;16!UBERON:0003978;1.99e-13;3!UBERON:0000946;1.99e-13;3!UBERON:0001723;7.40e-13;3!UBERON:0001033;7.40e-13;3!UBERON:0002135;8.94e-11;1!UBERON:0002146;1.24e-10;1!UBERON:0002426;1.24e-10;1!UBERON:0003831;1.24e-10;1!UBERON:0003898;1.24e-10;1!UBERON:0004830;1.24e-10;1!UBERON:0005623;1.24e-10;1!UBERON:0003830;1.24e-10;1!UBERON:0005175;1.24e-10;1!UBERON:0001774;1.24e-10;1!UBERON:0001103;1.24e-10;1!UBERON:0002079;2.87e-10;1!UBERON:0007100;3.78e-09;25!UBERON:0002385;5.22e-07;31!UBERON:0001015;5.22e-07;31!UBERON:0000383;5.22e-07;31!UBERON:0000948;6.16e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.18e-13,3;UBERON:0009751,2.18e-13,3;UBERON:0000946,2.18e-13,3;UBERON:0002523,2.18e-13,3;UBERON:0005983,2.18e-13,3;UBERON:0002165,2.18e-13,3;UBERON:0002062,2.18e-13,3;UBERON:0007280,2.18e-13,3;UBERON:0001723,4.29e-13,3;UBERON:0001033,4.29e-13,3;UBERON:0010056,4.29e-13,3;UBERON:0002135,8.95e-11,1;UBERON:0002426,1.08e-10,1;UBERON:0003831,1.08e-10,1;UBERON:0003898,1.08e-10,1;UBERON:0004830,1.08e-10,1;UBERON:0003830,1.08e-10,1;UBERON:0005175,1.08e-10,1;UBERON:0001774,1.08e-10,1;UBERON:0001103,1.08e-10,1;UBERON:0010084,1.08e-10,1;UBERON:0002146,1.43e-10,1;UBERON:0005623,1.43e-10,1;UBERON:0002079,2.50e-10,1;UBERON:0003103,1.43e-09,68;UBERON:0007100,1.93e-08,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0.213557388818567,0,0.900273288253207,0.412210116953756,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,1.41052937518696,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,1.73737568001095,0.410952645100767,4.47652408099739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0,0.413509717453592,0,0.145016693914229,0,2.1367688555217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,2.63481878724963,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44475294950759,0,0,0,0,0,3.6306712165393,2.06244381610515,0,0,0.429226048136571,2.00854311697685,10.547805180416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,0.662091970365432,1.27134268827375,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.200360940621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07963795609311,0.47775168788705,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0.647428837187895,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,1.95945073107265,1.71116650542641,0.0673520530145875,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p4@TRIM55 | |||
}} |
Latest revision as of 20:41, 18 September 2015
Short description: | p4@TRIM55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM55_5end |
Coexpression cluster: | NA |
Association with transcript: | 144bp_to_ENST00000276573, ENST00000350034, NM_033058, NM_184085, NM_184086, NM_184087, uc003xvu.2, uc003xvv.2, uc003xvw.2, uc003xvx.2_5end |
EntrezGene: | TRIM55 |
HGNC: | 14215 |
UniProt: | Q9BYV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.51e-21 | 4 |
multinucleate cell | 2.74e-10 | 1 |
myotube | 2.74e-10 | 1 |
epithelial cell of uterus | 5.75e-07 | 6 |
stromal cell of endometrium | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
valve | 2.18e-13 | 3 |
cardiac mesenchyme | 2.18e-13 | 3 |
cardial valve | 2.18e-13 | 3 |
tunica intima | 2.18e-13 | 3 |
heart layer | 2.18e-13 | 3 |
endocardium | 2.18e-13 | 3 |
endocardial cushion | 2.18e-13 | 3 |
presumptive endocardium | 2.18e-13 | 3 |
tongue | 4.29e-13 | 3 |
gustatory system | 4.29e-13 | 3 |
future tongue | 4.29e-13 | 3 |
mitral valve | 8.95e-11 | 1 |
chest muscle | 1.08e-10 | 1 |
respiratory system muscle | 1.08e-10 | 1 |
skeletal muscle of trunk | 1.08e-10 | 1 |
respiratory system skeletal muscle | 1.08e-10 | 1 |
thoracic segment muscle | 1.08e-10 | 1 |
chest organ | 1.08e-10 | 1 |
muscle of trunk | 1.08e-10 | 1 |
diaphragm | 1.08e-10 | 1 |
future diaphragm | 1.08e-10 | 1 |
pulmonary valve | 1.43e-10 | 1 |
semi-lunar valve | 1.43e-10 | 1 |
left cardiac atrium | 2.50e-10 | 1 |
compound organ | 1.43e-09 | 68 |
primary circulatory organ | 1.93e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.75e-07 | 6 |