FFCP PHASE1:Mm9::chr5:124901221..124901232,+: Difference between revisions
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{{FFCP|EntrezGene=67956|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=41bp_to_ENSMUST00000125588_5end|description=CAGE_peak_18_at_Setd8_5end|id=chr5:124901221..124901232,+|ontology_enrichment_celltype=CL:0002563!1.88e-10!9;CL:0002251!1.88e-10!9;CL:0000239!2.02e-08!6;CL:0000677!2.02e-08!6;CL:0000212!2.02e-08!6;CL:0000584!2.02e-08!6;CL:0000075!5.09e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,7.93e-17,6;CL:0000677,7.93e-17,6;CL:0000584,7.93e-17,6;CL:0000075,2.50e-14,7;CL:0002563,5.40e-11,9;CL:0002251,5.40e-11,9;CL:0000682,4.07e-09,3;CL:0000066,9.98e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.77e-23!59;UBERON:0000160!3.69e-23!43;UBERON:0000344!1.66e-17!15;UBERON:0001242!5.99e-15!13;UBERON:0000060!5.99e-15!13;UBERON:0001262!5.99e-15!13;UBERON:0004786!5.99e-15!13;UBERON:0001007!1.97e-12!128;UBERON:0001555!1.97e-12!128;UBERON:0007026!1.97e-12!128;UBERON:0004119!5.25e-12!130;UBERON:0000925!5.25e-12!130;UBERON:0006595!5.25e-12!130;UBERON:0004921!5.20e-11!126;UBERON:0004185!5.20e-11!126;UBERON:0004923!1.61e-10!24;UBERON:0003350!1.88e-10!9;UBERON:0004808!1.88e-10!9;UBERON:0001277!1.88e-10!9;UBERON:0000485!4.20e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-39,31;UBERON:0000344,1.76e-25,15;UBERON:0005409,1.87e-24,47;UBERON:0001242,3.68e-20,13;UBERON:0001262,3.68e-20,13;UBERON:0004786,3.68e-20,13;UBERON:0004923,1.82e-17,24;UBERON:0002108,2.99e-11,4;UBERON:0001007,4.48e-11,116;UBERON:0001555,4.48e-11,116;UBERON:0007026,4.48e-11,116;UBERON:0003350,5.40e-11,9;UBERON:0004808,5.40e-11,9;UBERON:0001277,5.40e-11,9;UBERON:0004119,8.57e-11,118;UBERON:0000925,8.57e-11,118;UBERON:0006595,8.57e-11,118;UBERON:0004921,4.93e-09,114;UBERON:0000485,7.19e-09,11;UBERON:0000331,1.25e-08,3;UBERON:0002116,1.25e-08,3;UBERON:0001204,1.25e-08,3;UBERON:0001168,1.25e-08,3;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2|phase1_expression=0,5.23463111459042,4.54999239389536,5.74682001482977,3.00537437967808,2.01455126294268,1.63528848416868,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,7.83962871687693,4.5881856213434,3.44539178469012,3.01533397311352,2.58565479223067,1.71021077510736,4.78857246543868,1.10865255327652,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0.268412837520744,0,0,13.5471701023357,3.17340679996253,0.213288250535234,0,0,0.605050573870028,0.667134131534611,1.90225626112559,1.89811624617805,2.47048432086016,2.5133520880027,2.78539060857611,3.11942539390592,3.59527763461689,3.02593269824572,4.38110801159608,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.405720242777006,0,1.01850340712568,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,1.03371317267288,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,1.32317038832977,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0.754505365544305,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.532427418478012,0,0.436039249896986,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p18@Setd8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67956 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=41bp_to_ENSMUST00000125588_5end | |||
|cluster_id=chr5:124901221..124901232,+ | |||
|description=CAGE_peak_18_at_Setd8_5end | |||
|id=chr5:124901221..124901232,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.88e-10!9;CL:0002251!1.88e-10!9;CL:0000239!2.02e-08!6;CL:0000677!2.02e-08!6;CL:0000212!2.02e-08!6;CL:0000584!2.02e-08!6;CL:0000075!5.09e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.93e-17,6;CL:0000677,7.93e-17,6;CL:0000584,7.93e-17,6;CL:0000075,2.50e-14,7;CL:0002563,5.40e-11,9;CL:0002251,5.40e-11,9;CL:0000682,4.07e-09,3;CL:0000066,9.98e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.77e-23!59;UBERON:0000160!3.69e-23!43;UBERON:0000344!1.66e-17!15;UBERON:0001242!5.99e-15!13;UBERON:0000060!5.99e-15!13;UBERON:0001262!5.99e-15!13;UBERON:0004786!5.99e-15!13;UBERON:0001007!1.97e-12!128;UBERON:0001555!1.97e-12!128;UBERON:0007026!1.97e-12!128;UBERON:0004119!5.25e-12!130;UBERON:0000925!5.25e-12!130;UBERON:0006595!5.25e-12!130;UBERON:0004921!5.20e-11!126;UBERON:0004185!5.20e-11!126;UBERON:0004923!1.61e-10!24;UBERON:0003350!1.88e-10!9;UBERON:0004808!1.88e-10!9;UBERON:0001277!1.88e-10!9;UBERON:0000485!4.20e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-39,31;UBERON:0000344,1.76e-25,15;UBERON:0005409,1.87e-24,47;UBERON:0001242,3.68e-20,13;UBERON:0001262,3.68e-20,13;UBERON:0004786,3.68e-20,13;UBERON:0004923,1.82e-17,24;UBERON:0002108,2.99e-11,4;UBERON:0001007,4.48e-11,116;UBERON:0001555,4.48e-11,116;UBERON:0007026,4.48e-11,116;UBERON:0003350,5.40e-11,9;UBERON:0004808,5.40e-11,9;UBERON:0001277,5.40e-11,9;UBERON:0004119,8.57e-11,118;UBERON:0000925,8.57e-11,118;UBERON:0006595,8.57e-11,118;UBERON:0004921,4.93e-09,114;UBERON:0000485,7.19e-09,11;UBERON:0000331,1.25e-08,3;UBERON:0002116,1.25e-08,3;UBERON:0001204,1.25e-08,3;UBERON:0001168,1.25e-08,3;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,5.74682001482977,3.00537437967808,2.01455126294268,1.63528848416868,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,7.83962871687693,4.5881856213434,3.44539178469012,3.01533397311352,2.58565479223067,1.71021077510736,4.78857246543868,1.10865255327652,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0.268412837520744,0,0,13.5471701023357,3.17340679996253,0.213288250535234,0,0,0.605050573870028,0.667134131534611,1.90225626112559,1.89811624617805,2.47048432086016,2.5133520880027,2.78539060857611,3.11942539390592,3.59527763461689,3.02593269824572,4.38110801159608,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.405720242777006,0,1.01850340712568,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,1.03371317267288,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,1.32317038832977,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0.754505365544305,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.532427418478012,0,0.436039249896986,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p18@Setd8 | |||
}} |
Latest revision as of 21:47, 1 October 2015
Short description: | p18@Setd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Setd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 41bp_to_ENSMUST00000125588_5end |
EntrezGene: | Setd8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.93e-17 | 6 |
gut absorptive cell | 7.93e-17 | 6 |
enterocyte | 7.93e-17 | 6 |
columnar/cuboidal epithelial cell | 2.50e-14 | 7 |
intestinal epithelial cell | 5.40e-11 | 9 |
epithelial cell of alimentary canal | 5.40e-11 | 9 |
M cell of gut | 4.07e-09 | 3 |
epithelial cell | 9.98e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-39 | 31 |
mucosa | 1.76e-25 | 15 |
gastrointestinal system | 1.87e-24 | 47 |
intestinal mucosa | 3.68e-20 | 13 |
wall of intestine | 3.68e-20 | 13 |
gastrointestinal system mucosa | 3.68e-20 | 13 |
organ component layer | 1.82e-17 | 24 |
small intestine | 2.99e-11 | 4 |
digestive system | 4.48e-11 | 116 |
digestive tract | 4.48e-11 | 116 |
primitive gut | 4.48e-11 | 116 |
epithelium of mucosa | 5.40e-11 | 9 |
gastrointestinal system epithelium | 5.40e-11 | 9 |
intestinal epithelium | 5.40e-11 | 9 |
endoderm-derived structure | 8.57e-11 | 118 |
endoderm | 8.57e-11 | 118 |
presumptive endoderm | 8.57e-11 | 118 |
subdivision of digestive tract | 4.93e-09 | 114 |
simple columnar epithelium | 7.19e-09 | 11 |
ileal mucosa | 1.25e-08 | 3 |
ileum | 1.25e-08 | 3 |
mucosa of small intestine | 1.25e-08 | 3 |
wall of small intestine | 1.25e-08 | 3 |
gut-associated lymphoid tissue | 3.22e-07 | 2 |
mucosa-associated lymphoid tissue | 3.22e-07 | 2 |
lymphoid tissue | 3.22e-07 | 2 |