FFCP PHASE1:Hg19::chr9:133710199..133710220,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:133710199..133710220,- | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr9:133710199..133710220,- | |||
|id=chr9:133710199..133710220,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000342;6.98e-09;1!CL:0002565;6.98e-09;1!CL:0002591;6.98e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,5.75e-09,1;CL:0002565,5.75e-09,1;CL:0002591,8.49e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.58e-20;29!UBERON:0000358;3.05e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.46e-08,106;DOID:0050687,3.82e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.40e-15!9;UBERON:0001557!4.59e-10!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.79e-69;9!UBERON:0001557;5.79e-69;9!UBERON:0000072;6.83e-15;37!UBERON:0000065;1.48e-12;44!UBERON:0007625;3.53e-11;11!UBERON:0002506;6.98e-09;1!UBERON:0001769;6.98e-09;1!UBERON:0000488;1.76e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.88e-69,9;UBERON:0001557,1.73e-39,19;UBERON:0008947,2.04e-15,38;UBERON:0003258,2.04e-15,38;UBERON:0000072,5.13e-15,47;UBERON:0000065,7.37e-13,54;UBERON:0007625,2.85e-11,11;UBERON:0002506,5.75e-09,1;UBERON:0001769,5.75e-09,1;UBERON:0001004,6.06e-09,74;UBERON:0000488,1.58e-08,4;UBERON:0001041,2.29e-07,87;UBERON:0001048,6.26e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,1.33037638477538,0.087834785693126,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.397227542439656,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.717558542755448,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19428360107579,2.36018566109342,1.20505514941741,2.53676137284506,2.83243277320128,1.89816495288877,3.10112008768378,2.74710051175484,3.46272441251751,0,0,0,0,0,0,0,0,0,1.54411029268673,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,1.42743191037729,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,1.96808787419823,0,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0.307007349452259,0,0,1.0151168573996,0.255679882248303,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0.949138274156178,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.511343412510774,0.615424027305347,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,6.31843088410143,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.208843899010911,0,0,0.234264445725339,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,2.32215195093804,4.31226970808495,2.38134825454307,0,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,1.017074150619,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0,0.830091809617385,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,1.77962244319307,0.228840068396924,0,0.310874401165561,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.762764190934334,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0.244209805832924,0,1.9307228228694,0.0898252021065869,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr9:133710199..133710220,- | |||
}} |
Latest revision as of 23:36, 31 July 2015
Short description: | p@chr9:133710199..133710220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:133710199..133710220, - |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 5.75e-09 | 1 |
iris pigment epithelial cell | 5.75e-09 | 1 |
smooth muscle cell of the pulmonary artery | 8.49e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.88e-69 | 9 |
upper respiratory tract | 1.73e-39 | 19 |
respiratory primordium | 2.04e-15 | 38 |
endoderm of foregut | 2.04e-15 | 38 |
segment of respiratory tract | 5.13e-15 | 47 |
respiratory tract | 7.37e-13 | 54 |
pigment epithelium of eye | 2.85e-11 | 11 |
iris epithelium | 5.75e-09 | 1 |
iris | 5.75e-09 | 1 |
respiratory system | 6.06e-09 | 74 |
atypical epithelium | 1.58e-08 | 4 |
foregut | 2.29e-07 | 87 |
primordium | 6.26e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.46e-08 | 106 |
cell type cancer | 3.82e-08 | 143 |