FFCP PHASE1:Mm9::chr6:83157587..83157600,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:83157587..83157600,+|id=chr6:83157587..83157600,+|ontology_enrichment_celltype=CL:0002563!5.15e-16!9;CL:0002251!5.15e-16!9;CL:0000239!4.12e-11!6;CL:0000677!4.12e-11!6;CL:0000212!4.12e-11!6;CL:0000584!4.12e-11!6;CL:0000075!2.20e-09!7;CL:0002076!9.19e-09!15;CL:0000066!8.68e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,2.08e-25,9;CL:0002251,2.08e-25,9;CL:0000239,2.64e-17,6;CL:0000677,2.64e-17,6;CL:0000584,2.64e-17,6;CL:0000075,9.53e-15,7;CL:0002076,1.29e-14,15;CL:0000066,4.34e-12,25;CL:0000223,1.44e-10,20;CL:0002250,1.14e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.19e-28!43;UBERON:0005409!8.88e-23!59;UBERON:0000344!6.11e-22!15;UBERON:0001242!7.61e-19!13;UBERON:0000060!7.61e-19!13;UBERON:0001262!7.61e-19!13;UBERON:0004786!7.61e-19!13;UBERON:0003350!5.15e-16!9;UBERON:0004808!5.15e-16!9;UBERON:0001277!5.15e-16!9;UBERON:0000485!1.04e-12!11;UBERON:0004923!2.96e-12!24;UBERON:0001007!1.87e-07!128;UBERON:0001555!1.87e-07!128;UBERON:0007026!1.87e-07!128;UBERON:0004119!3.26e-07!130;UBERON:0000925!3.26e-07!130;UBERON:0006595!3.26e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.55e-60,31;UBERON:0005409,3.24e-38,47;UBERON:0000344,1.52e-35,15;UBERON:0001242,2.06e-30,13;UBERON:0001262,2.06e-30,13;UBERON:0004786,2.06e-30,13;UBERON:0003350,2.08e-25,9;UBERON:0004808,2.08e-25,9;UBERON:0001277,2.08e-25,9;UBERON:0004923,4.11e-21,24;UBERON:0000485,1.67e-20,11;UBERON:0001007,5.57e-15,116;UBERON:0001555,5.57e-15,116;UBERON:0007026,5.57e-15,116;UBERON:0004119,1.24e-14,118;UBERON:0000925,1.24e-14,118;UBERON:0006595,1.24e-14,118;UBERON:0004921,1.06e-12,114;UBERON:0002108,6.33e-07,4|phase1_expression=0,3.48975407639361,2.27499619694768,12.7034968748869,9.01612313903425,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,2.52350209173887,0,2.58457197695445,1.07735616342945,1.52018735565099,1.51218077855958,0,0,0,0,4.62162591602039,2.82598897109437,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,4.49565963328025,0,0,0.38660238396628,1.81515172161008,3.33567065767305,3.80451252225118,8.54152310780121,1.15289268306808,2.5133520880027,2.98434708061726,3.50935356814416,8.08937467788799,6.05186539649144,8.16479220342906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.655087691238533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.384150914429216,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr6:83157587..83157600,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:83157587..83157600,+ | |||
|description=CAGE_peak_at_chr6:83157587..83157600,+ | |||
|id=chr6:83157587..83157600,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.15e-16!9;CL:0002251!5.15e-16!9;CL:0000239!4.12e-11!6;CL:0000677!4.12e-11!6;CL:0000212!4.12e-11!6;CL:0000584!4.12e-11!6;CL:0000075!2.20e-09!7;CL:0002076!9.19e-09!15;CL:0000066!8.68e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.08e-25,9;CL:0002251,2.08e-25,9;CL:0000239,2.64e-17,6;CL:0000677,2.64e-17,6;CL:0000584,2.64e-17,6;CL:0000075,9.53e-15,7;CL:0002076,1.29e-14,15;CL:0000066,4.34e-12,25;CL:0000223,1.44e-10,20;CL:0002250,1.14e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.19e-28!43;UBERON:0005409!8.88e-23!59;UBERON:0000344!6.11e-22!15;UBERON:0001242!7.61e-19!13;UBERON:0000060!7.61e-19!13;UBERON:0001262!7.61e-19!13;UBERON:0004786!7.61e-19!13;UBERON:0003350!5.15e-16!9;UBERON:0004808!5.15e-16!9;UBERON:0001277!5.15e-16!9;UBERON:0000485!1.04e-12!11;UBERON:0004923!2.96e-12!24;UBERON:0001007!1.87e-07!128;UBERON:0001555!1.87e-07!128;UBERON:0007026!1.87e-07!128;UBERON:0004119!3.26e-07!130;UBERON:0000925!3.26e-07!130;UBERON:0006595!3.26e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.55e-60,31;UBERON:0005409,3.24e-38,47;UBERON:0000344,1.52e-35,15;UBERON:0001242,2.06e-30,13;UBERON:0001262,2.06e-30,13;UBERON:0004786,2.06e-30,13;UBERON:0003350,2.08e-25,9;UBERON:0004808,2.08e-25,9;UBERON:0001277,2.08e-25,9;UBERON:0004923,4.11e-21,24;UBERON:0000485,1.67e-20,11;UBERON:0001007,5.57e-15,116;UBERON:0001555,5.57e-15,116;UBERON:0007026,5.57e-15,116;UBERON:0004119,1.24e-14,118;UBERON:0000925,1.24e-14,118;UBERON:0006595,1.24e-14,118;UBERON:0004921,1.06e-12,114;UBERON:0002108,6.33e-07,4 | |||
|phase1_expression=0,3.48975407639361,2.27499619694768,12.7034968748869,9.01612313903425,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,2.52350209173887,0,2.58457197695445,1.07735616342945,1.52018735565099,1.51218077855958,0,0,0,0,4.62162591602039,2.82598897109437,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,4.49565963328025,0,0,0.38660238396628,1.81515172161008,3.33567065767305,3.80451252225118,8.54152310780121,1.15289268306808,2.5133520880027,2.98434708061726,3.50935356814416,8.08937467788799,6.05186539649144,8.16479220342906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.655087691238533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.384150914429216,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr6:83157587..83157600,+ | |||
}} |
Latest revision as of 04:26, 6 August 2015
Short description: | p@chr6:83157587..83157600, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:83157587..83157600, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.08e-25 | 9 |
epithelial cell of alimentary canal | 2.08e-25 | 9 |
brush border epithelial cell | 2.64e-17 | 6 |
gut absorptive cell | 2.64e-17 | 6 |
enterocyte | 2.64e-17 | 6 |
columnar/cuboidal epithelial cell | 9.53e-15 | 7 |
endo-epithelial cell | 1.29e-14 | 15 |
epithelial cell | 4.34e-12 | 25 |
endodermal cell | 1.44e-10 | 20 |
intestinal crypt stem cell | 1.14e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.55e-60 | 31 |
gastrointestinal system | 3.24e-38 | 47 |
mucosa | 1.52e-35 | 15 |
intestinal mucosa | 2.06e-30 | 13 |
wall of intestine | 2.06e-30 | 13 |
gastrointestinal system mucosa | 2.06e-30 | 13 |
epithelium of mucosa | 2.08e-25 | 9 |
gastrointestinal system epithelium | 2.08e-25 | 9 |
intestinal epithelium | 2.08e-25 | 9 |
organ component layer | 4.11e-21 | 24 |
simple columnar epithelium | 1.67e-20 | 11 |
digestive system | 5.57e-15 | 116 |
digestive tract | 5.57e-15 | 116 |
primitive gut | 5.57e-15 | 116 |
endoderm-derived structure | 1.24e-14 | 118 |
endoderm | 1.24e-14 | 118 |
presumptive endoderm | 1.24e-14 | 118 |
subdivision of digestive tract | 1.06e-12 | 114 |
small intestine | 6.33e-07 | 4 |