FFCP PHASE1:Mm9::chr6:86704892..86704905,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:86704892..86704905,-|id=chr6:86704892..86704905,-|ontology_enrichment_celltype=CL:0000066!4.01e-08!25;CL:0002563!1.73e-07!9;CL:0002251!1.73e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-18,9;CL:0002251,1.05e-18,9;CL:0000239,6.98e-17,6;CL:0000677,6.98e-17,6;CL:0000584,6.98e-17,6;CL:0000066,5.15e-16,25;CL:0000075,2.24e-14,7;CL:0002076,2.63e-13,15;CL:0000223,7.83e-12,20;CL:0000682,2.96e-09,3;CL:0000473,6.61e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.81e-12!43;UBERON:0000344!5.79e-12!15;UBERON:0005409!5.38e-11!59;UBERON:0001242!2.28e-10!13;UBERON:0000060!2.28e-10!13;UBERON:0001262!2.28e-10!13;UBERON:0004786!2.28e-10!13;UBERON:0004923!7.00e-10!24;UBERON:0004119!4.40e-08!130;UBERON:0000925!4.40e-08!130;UBERON:0006595!4.40e-08!130;UBERON:0000485!1.28e-07!11;UBERON:0001007!1.57e-07!128;UBERON:0001555!1.57e-07!128;UBERON:0007026!1.57e-07!128;UBERON:0003350!1.73e-07!9;UBERON:0004808!1.73e-07!9;UBERON:0001277!1.73e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.58e-30,15;UBERON:0000160,1.51e-28,31;UBERON:0001242,7.22e-25,13;UBERON:0001262,7.22e-25,13;UBERON:0004786,7.22e-25,13;UBERON:0004923,1.19e-20,24;UBERON:0003350,1.05e-18,9;UBERON:0004808,1.05e-18,9;UBERON:0001277,1.05e-18,9;UBERON:0005409,2.20e-17,47;UBERON:0000485,4.54e-15,11;UBERON:0002108,3.47e-12,4;UBERON:0000331,3.89e-10,3;UBERON:0002116,3.89e-10,3;UBERON:0001204,3.89e-10,3;UBERON:0001168,3.89e-10,3;UBERON:0004119,1.43e-09,118;UBERON:0000925,1.43e-09,118;UBERON:0006595,1.43e-09,118;UBERON:0001007,7.51e-09,116;UBERON:0001555,7.51e-09,116;UBERON:0007026,7.51e-09,116;UBERON:0001962,4.21e-07,2;UBERON:0001961,4.21e-07,2;UBERON:0001744,4.21e-07,2;UBERON:0004921,4.44e-07,114|phase1_expression=0.640595388419176,3.83872948403297,2.27499619694768,4.53696316960245,2.00358291978539,3.86122325397347,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0.0992909512008853,0,5.43974237497583,4.81759490241057,2.8711598205751,2.15380998079537,4.95583835177545,6.84084310042946,16.3819584343955,7.53883736228036,0,0,0,0.577703239502549,1.49611180822643,1.22501613757421,0,0,0,0.588231488031014,0,0,0.629484089877886,0.608261587317087,0,0,0,0,0.777719596297134,0.279972843250725,0,0.167782606057736,0,0,1.02903774414379,1.71920063963254,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0.579728977403356,0,0,1.61910957491345,0.649776417447669,0,0.280888840263504,1.02258193546835,1.81850203222008,0.70667914902068,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0.5709193985953,0.776813650941515,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.741584903203122,0,0.884610551949874,0.323533699894818,0,0,0,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0.660837565967596,0.793351699990633,0,0,0.257734922644187,0.403367049246685,0.22237804384487,1.52180500890047,2.37264530772256,2.9645811850322,1.50801125280162,1.39269530428806,0.38992817423824,0,2.59365659849633,2.58883655230677,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0,0.549122826376163,4.31304619582064,0.744281895337007,0,0.252578877947112,0,0.482443521363367,0.923765950833023,0,0.488894929326078,0,0,0,0.238043640886014,0,0,0.44292937929755,0.159454768657487,0,0.690739927463582,0.578596234326046,7.53956419696361,0.54390568381871,0,0,0,0,0.983609672260053,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.614870295887855,0.258428293168221,0.727067458955011,0,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,1.27099242518292,0.661585194164886,0.16488625294148,0.161464426695906,0,0.238744688006273,0,1.1659233465194,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,0.777689839750757,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0.39736270956253,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0.443971906748129,0.448569283047378,0.167884616364078,0.19318959403219,0.93841237725591,0,0.428736758158132,0,0,0,0,0.1718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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:86704892..86704905,- | |||
|description=CAGE_peak_at_chr6:86704892..86704905,- | |||
|id=chr6:86704892..86704905,- | |||
|ontology_enrichment_celltype=CL:0000066!4.01e-08!25;CL:0002563!1.73e-07!9;CL:0002251!1.73e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-18,9;CL:0002251,1.05e-18,9;CL:0000239,6.98e-17,6;CL:0000677,6.98e-17,6;CL:0000584,6.98e-17,6;CL:0000066,5.15e-16,25;CL:0000075,2.24e-14,7;CL:0002076,2.63e-13,15;CL:0000223,7.83e-12,20;CL:0000682,2.96e-09,3;CL:0000473,6.61e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.81e-12!43;UBERON:0000344!5.79e-12!15;UBERON:0005409!5.38e-11!59;UBERON:0001242!2.28e-10!13;UBERON:0000060!2.28e-10!13;UBERON:0001262!2.28e-10!13;UBERON:0004786!2.28e-10!13;UBERON:0004923!7.00e-10!24;UBERON:0004119!4.40e-08!130;UBERON:0000925!4.40e-08!130;UBERON:0006595!4.40e-08!130;UBERON:0000485!1.28e-07!11;UBERON:0001007!1.57e-07!128;UBERON:0001555!1.57e-07!128;UBERON:0007026!1.57e-07!128;UBERON:0003350!1.73e-07!9;UBERON:0004808!1.73e-07!9;UBERON:0001277!1.73e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.58e-30,15;UBERON:0000160,1.51e-28,31;UBERON:0001242,7.22e-25,13;UBERON:0001262,7.22e-25,13;UBERON:0004786,7.22e-25,13;UBERON:0004923,1.19e-20,24;UBERON:0003350,1.05e-18,9;UBERON:0004808,1.05e-18,9;UBERON:0001277,1.05e-18,9;UBERON:0005409,2.20e-17,47;UBERON:0000485,4.54e-15,11;UBERON:0002108,3.47e-12,4;UBERON:0000331,3.89e-10,3;UBERON:0002116,3.89e-10,3;UBERON:0001204,3.89e-10,3;UBERON:0001168,3.89e-10,3;UBERON:0004119,1.43e-09,118;UBERON:0000925,1.43e-09,118;UBERON:0006595,1.43e-09,118;UBERON:0001007,7.51e-09,116;UBERON:0001555,7.51e-09,116;UBERON:0007026,7.51e-09,116;UBERON:0001962,4.21e-07,2;UBERON:0001961,4.21e-07,2;UBERON:0001744,4.21e-07,2;UBERON:0004921,4.44e-07,114 | |||
|phase1_expression=0.640595388419176,3.83872948403297,2.27499619694768,4.53696316960245,2.00358291978539,3.86122325397347,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0.0992909512008853,0,5.43974237497583,4.81759490241057,2.8711598205751,2.15380998079537,4.95583835177545,6.84084310042946,16.3819584343955,7.53883736228036,0,0,0,0.577703239502549,1.49611180822643,1.22501613757421,0,0,0,0.588231488031014,0,0,0.629484089877886,0.608261587317087,0,0,0,0,0.777719596297134,0.279972843250725,0,0.167782606057736,0,0,1.02903774414379,1.71920063963254,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0.579728977403356,0,0,1.61910957491345,0.649776417447669,0,0.280888840263504,1.02258193546835,1.81850203222008,0.70667914902068,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0.5709193985953,0.776813650941515,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.741584903203122,0,0.884610551949874,0.323533699894818,0,0,0,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0.660837565967596,0.793351699990633,0,0,0.257734922644187,0.403367049246685,0.22237804384487,1.52180500890047,2.37264530772256,2.9645811850322,1.50801125280162,1.39269530428806,0.38992817423824,0,2.59365659849633,2.58883655230677,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0,0.549122826376163,4.31304619582064,0.744281895337007,0,0.252578877947112,0,0.482443521363367,0.923765950833023,0,0.488894929326078,0,0,0,0.238043640886014,0,0,0.44292937929755,0.159454768657487,0,0.690739927463582,0.578596234326046,7.53956419696361,0.54390568381871,0,0,0,0,0.983609672260053,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.614870295887855,0.258428293168221,0.727067458955011,0,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,1.27099242518292,0.661585194164886,0.16488625294148,0.161464426695906,0,0.238744688006273,0,1.1659233465194,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,0.777689839750757,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0.39736270956253,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0.443971906748129,0.448569283047378,0.167884616364078,0.19318959403219,0.93841237725591,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0,0,0,0.818462086339379,0.154936841185966,0.192906610981141,0,0,0,0,0.441182838239031,0 | |||
|short_description=p@chr6:86704892..86704905,- | |||
}} |
Latest revision as of 06:04, 6 August 2015
Short description: | p@chr6:86704892..86704905, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:86704892..86704905, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.05e-18 | 9 |
epithelial cell of alimentary canal | 1.05e-18 | 9 |
brush border epithelial cell | 6.98e-17 | 6 |
gut absorptive cell | 6.98e-17 | 6 |
enterocyte | 6.98e-17 | 6 |
epithelial cell | 5.15e-16 | 25 |
columnar/cuboidal epithelial cell | 2.24e-14 | 7 |
endo-epithelial cell | 2.63e-13 | 15 |
endodermal cell | 7.83e-12 | 20 |
M cell of gut | 2.96e-09 | 3 |
defensive cell | 6.61e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.58e-30 | 15 |
intestine | 1.51e-28 | 31 |
intestinal mucosa | 7.22e-25 | 13 |
wall of intestine | 7.22e-25 | 13 |
gastrointestinal system mucosa | 7.22e-25 | 13 |
organ component layer | 1.19e-20 | 24 |
epithelium of mucosa | 1.05e-18 | 9 |
gastrointestinal system epithelium | 1.05e-18 | 9 |
intestinal epithelium | 1.05e-18 | 9 |
gastrointestinal system | 2.20e-17 | 47 |
simple columnar epithelium | 4.54e-15 | 11 |
small intestine | 3.47e-12 | 4 |
ileal mucosa | 3.89e-10 | 3 |
ileum | 3.89e-10 | 3 |
mucosa of small intestine | 3.89e-10 | 3 |
wall of small intestine | 3.89e-10 | 3 |
endoderm-derived structure | 1.43e-09 | 118 |
endoderm | 1.43e-09 | 118 |
presumptive endoderm | 1.43e-09 | 118 |
digestive system | 7.51e-09 | 116 |
digestive tract | 7.51e-09 | 116 |
primitive gut | 7.51e-09 | 116 |
gut-associated lymphoid tissue | 4.21e-07 | 2 |
mucosa-associated lymphoid tissue | 4.21e-07 | 2 |
lymphoid tissue | 4.21e-07 | 2 |
subdivision of digestive tract | 4.44e-07 | 114 |