FFCP PHASE1:Mm9::chr11:58196298..58196316,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:58196298..58196316,+
|short_description=p@chr11:58196298..58196316,+
|description=CAGE_peak_at_chr11:58196298..58196316,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:58196298..58196316,+ | |||
|description=CAGE_peak_at_chr11:58196298..58196316,+ | |||
|id=chr11:58196298..58196316,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.47e-14!9;CL:0002251!5.47e-14!9;CL:0000239!1.85e-10!6;CL:0000677!1.85e-10!6;CL:0000212!1.85e-10!6;CL:0000584!1.85e-10!6;CL:0000075!7.78e-09!7;CL:0002076!1.22e-07!15;CL:0000066!1.79e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.57e-12,6;CL:0000677,5.57e-12,6;CL:0000584,5.57e-12,6;CL:0000075,3.09e-10,7;CL:0000682,1.38e-09,3;CL:0002563,6.64e-08,9;CL:0002251,6.64e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.53e-32!59;UBERON:0000160!5.81e-28!43;UBERON:0000344!9.75e-24!15;UBERON:0001242!1.31e-20!13;UBERON:0000060!1.31e-20!13;UBERON:0001262!1.31e-20!13;UBERON:0004786!1.31e-20!13;UBERON:0001007!3.51e-14!128;UBERON:0001555!3.51e-14!128;UBERON:0007026!3.51e-14!128;UBERON:0003350!5.47e-14!9;UBERON:0004808!5.47e-14!9;UBERON:0001277!5.47e-14!9;UBERON:0004119!8.44e-14!130;UBERON:0000925!8.44e-14!130;UBERON:0006595!8.44e-14!130;UBERON:0004923!2.65e-13!24;UBERON:0004921!1.71e-12!126;UBERON:0004185!1.71e-12!126;UBERON:0000485!4.27e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.44e-35,31;UBERON:0005409,6.04e-30,47;UBERON:0000344,4.56e-22,15;UBERON:0001242,2.97e-17,13;UBERON:0001262,2.97e-17,13;UBERON:0004786,2.97e-17,13;UBERON:0004923,5.22e-13,24;UBERON:0001007,1.35e-11,116;UBERON:0001555,1.35e-11,116;UBERON:0007026,1.35e-11,116;UBERON:0004119,2.58e-11,118;UBERON:0000925,2.58e-11,118;UBERON:0006595,2.58e-11,118;UBERON:0000331,2.43e-10,3;UBERON:0002116,2.43e-10,3;UBERON:0001204,2.43e-10,3;UBERON:0001168,2.43e-10,3;UBERON:0004921,1.39e-09,114;UBERON:0003350,6.64e-08,9;UBERON:0004808,6.64e-08,9;UBERON:0001277,6.64e-08,9;UBERON:0002108,7.53e-08,4;UBERON:0001155,1.24e-07,2;UBERON:0000059,1.24e-07,2;UBERON:0001962,8.88e-07,2;UBERON:0001961,8.88e-07,2;UBERON:0001744,8.88e-07,2 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,1.20985684522732,2.00358291978539,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,2.2940928106717,2.8711598205751,1.29228598847722,1.50829862880122,4.75058548640935,1.51218077855958,5.32153225572731,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0.213288250535234,0,0.128867461322093,1.61346819698674,0.444756087689741,0.570676878337677,1.89811624617805,1.4822905925161,1.25667604400135,1.59165177632921,1.16978452271472,0,2.80979464837102,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.108005340821801,0.209088296014469,0.436725127492355,1.48350781023303,0.41326727862668,0.785267825952089,9.98035294346805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,1.74487703819681,1.36499771816861,1.20985684522732,2.00358291978539,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,2.2940928106717,2.8711598205751,1.29228598847722,1.50829862880122,4.75058548640935,1.51218077855958,5.32153225572731,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0.213288250535234,0,0.128867461322093,1.61346819698674,0.444756087689741,0.570676878337677,1.89811624617805,1.4822905925161,1.25667604400135,1.59165177632921,1.16978452271472,0,2.80979464837102,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.108005340821801,0.209088296014469,0.436725127492355,1.48350781023303,0.41326727862668,0.785267825952089,9.98035294346805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr11:58196298..58196316,+ | |||
}} | }} |
Latest revision as of 04:07, 6 August 2015
Short description: | p@chr11:58196298..58196316, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58196298..58196316, + |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.57e-12 | 6 |
gut absorptive cell | 5.57e-12 | 6 |
enterocyte | 5.57e-12 | 6 |
columnar/cuboidal epithelial cell | 3.09e-10 | 7 |
M cell of gut | 1.38e-09 | 3 |
intestinal epithelial cell | 6.64e-08 | 9 |
epithelial cell of alimentary canal | 6.64e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.44e-35 | 31 |
gastrointestinal system | 6.04e-30 | 47 |
mucosa | 4.56e-22 | 15 |
intestinal mucosa | 2.97e-17 | 13 |
wall of intestine | 2.97e-17 | 13 |
gastrointestinal system mucosa | 2.97e-17 | 13 |
organ component layer | 5.22e-13 | 24 |
digestive system | 1.35e-11 | 116 |
digestive tract | 1.35e-11 | 116 |
primitive gut | 1.35e-11 | 116 |
endoderm-derived structure | 2.58e-11 | 118 |
endoderm | 2.58e-11 | 118 |
presumptive endoderm | 2.58e-11 | 118 |
ileal mucosa | 2.43e-10 | 3 |
ileum | 2.43e-10 | 3 |
mucosa of small intestine | 2.43e-10 | 3 |
wall of small intestine | 2.43e-10 | 3 |
subdivision of digestive tract | 1.39e-09 | 114 |
epithelium of mucosa | 6.64e-08 | 9 |
gastrointestinal system epithelium | 6.64e-08 | 9 |
intestinal epithelium | 6.64e-08 | 9 |
small intestine | 7.53e-08 | 4 |
colon | 1.24e-07 | 2 |
large intestine | 1.24e-07 | 2 |
gut-associated lymphoid tissue | 8.88e-07 | 2 |
mucosa-associated lymphoid tissue | 8.88e-07 | 2 |
lymphoid tissue | 8.88e-07 | 2 |