FFCP PHASE1:Hg19::chr11:89224580..89224594,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=50507 | |EntrezGene=50507 | ||
Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000525278_5end | |association_with_transcript=-18bp_to_ENST00000525278_5end | ||
|cluster_id=chr11:89224580..89224594,- | |||
|coexpression_cluster_id=C1648 | |coexpression_cluster_id=C1648 | ||
|description=CAGE_peak_4_at_NOX4_5end | |description=CAGE_peak_4_at_NOX4_5end |
Latest revision as of 00:19, 25 September 2015
Short description: | p4@NOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NOX4_5end |
Coexpression cluster: | C1648_Adipocyte_Ciliary_Endothelial_Smooth_aorta_kidney_hepatic |
Association with transcript: | -18bp_to_ENST00000525278_5end |
EntrezGene: | NOX4 |
HGNC: | 7891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@NOX4 |
---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.41e-29 | 24 |
blood vessel endothelial cell | 8.54e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.54e-25 | 18 |
endothelial cell | 1.76e-21 | 36 |
meso-epithelial cell | 1.76e-16 | 45 |
ciliated cell | 5.66e-14 | 3 |
ciliated epithelial cell | 5.66e-14 | 3 |
multi-ciliated epithelial cell | 5.66e-14 | 3 |
non-pigmented ciliary epithelial cell | 5.66e-14 | 3 |
astrocyte of the cerebral cortex | 3.98e-13 | 3 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.54e-25 | 18 |
endothelium | 8.54e-25 | 18 |
cardiovascular system endothelium | 8.54e-25 | 18 |
vasculature | 1.06e-21 | 78 |
vascular system | 1.06e-21 | 78 |
simple squamous epithelium | 7.29e-20 | 22 |
vessel | 1.54e-18 | 68 |
pigment epithelium of eye | 6.28e-18 | 11 |
squamous epithelium | 3.34e-17 | 25 |
epithelial tube open at both ends | 1.46e-15 | 59 |
Showing 1 to 10 of 52 entries