FFCP PHASE1:Mm9::chr12:70473099..70473159,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:70473099..70473159,+
|short_description=p1@Arf6
|description=CAGE_peak_1_at_Arf6_5end
|association_with_transcript=0bp_to_ENSMUST00000050063,NM_007481,uc0...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11845 | |EntrezGene=11845 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=P62331,Q3U0D7 | |UniProt=P62331,Q3U0D7 | ||
|association_with_transcript=0bp_to_ENSMUST00000050063,NM_007481,uc007nsj.1_5end | |||
|cluster_id=chr12:70473099..70473159,+ | |||
|description=CAGE_peak_1_at_Arf6_5end | |||
|id=chr12:70473099..70473159,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.51e-14!66;CL:0000219!3.91e-10!54;CL:0002320!5.01e-09!46;CL:0000134!5.01e-09!46;CL:0000988!2.06e-08!32;CL:0002032!2.06e-08!32;CL:0000037!2.06e-08!32;CL:0000566!2.06e-08!32;CL:0000837!2.06e-08!32;CL:0002031!4.29e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,3.91e-10,54;CL:0002320,5.01e-09,46;CL:0000134,5.01e-09,46;CL:0000988,2.06e-08,32;CL:0002032,2.06e-08,32;CL:0000037,2.06e-08,32;CL:0000837,2.06e-08,32;CL:0002031,4.29e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.66e-15,118;UBERON:0000925,1.66e-15,118;UBERON:0006595,1.66e-15,118;UBERON:0001007,3.90e-15,116;UBERON:0001555,3.90e-15,116;UBERON:0007026,3.90e-15,116;UBERON:0004921,4.22e-14,114;UBERON:0005409,5.56e-10,47;UBERON:0004923,7.91e-10,24;UBERON:0000344,1.57e-09,15;UBERON:0000160,1.80e-09,31;UBERON:0002384,5.01e-09,46;UBERON:0002193,1.56e-08,48;UBERON:0002405,1.56e-08,48;UBERON:0001242,2.27e-08,13;UBERON:0001262,2.27e-08,13;UBERON:0004786,2.27e-08,13;UBERON:0002390,3.46e-08,45;UBERON:0003061,3.46e-08,45;UBERON:0005911,2.30e-07,69;UBERON:0000490,4.04e-07,66;UBERON:0003929,5.31e-07,55 | |||
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| ||
|short_description=p1@Arf6 | |||
}} | }} |
Latest revision as of 17:34, 26 September 2015
Short description: | p1@Arf6 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000050063, NM_007481, uc007nsj.1_5end |
EntrezGene: | Arf6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 3.91e-10 | 54 |
connective tissue cell | 5.01e-09 | 46 |
mesenchymal cell | 5.01e-09 | 46 |
hematopoietic cell | 2.06e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.06e-08 | 32 |
hematopoietic stem cell | 2.06e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.06e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 4.29e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.66e-15 | 118 |
endoderm | 1.66e-15 | 118 |
presumptive endoderm | 1.66e-15 | 118 |
digestive system | 3.90e-15 | 116 |
digestive tract | 3.90e-15 | 116 |
primitive gut | 3.90e-15 | 116 |
subdivision of digestive tract | 4.22e-14 | 114 |
gastrointestinal system | 5.56e-10 | 47 |
organ component layer | 7.91e-10 | 24 |
mucosa | 1.57e-09 | 15 |
intestine | 1.80e-09 | 31 |
connective tissue | 5.01e-09 | 46 |
hemolymphoid system | 1.56e-08 | 48 |
immune system | 1.56e-08 | 48 |
intestinal mucosa | 2.27e-08 | 13 |
wall of intestine | 2.27e-08 | 13 |
gastrointestinal system mucosa | 2.27e-08 | 13 |
hematopoietic system | 3.46e-08 | 45 |
blood island | 3.46e-08 | 45 |
endo-epithelium | 2.30e-07 | 69 |
unilaminar epithelium | 4.04e-07 | 66 |
gut epithelium | 5.31e-07 | 55 |