FFCP PHASE1:Mm9::chr15:76521668..76521688,+: Difference between revisions
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|id=chr15:76521668..76521688,+
|short_description=p6@Ppp1r16a
|description=CAGE_peak_6_at_Ppp1r16a_5end
|association_with_transcript=-174bp_to_ENSMUST00000143274_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73062 | |EntrezGene=73062 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-174bp_to_ENSMUST00000143274_5end | |||
|cluster_id=chr15:76521668..76521688,+ | |||
|description=CAGE_peak_6_at_Ppp1r16a_5end | |||
|id=chr15:76521668..76521688,+ | |||
|ontology_enrichment_celltype=CL:0000239!7.86e-13!6;CL:0000677!7.86e-13!6;CL:0000212!7.86e-13!6;CL:0000584!7.86e-13!6;CL:0000075!7.29e-11!7;CL:0002563!1.15e-10!9;CL:0002251!1.15e-10!9;CL:0000066!6.57e-08!25;CL:0000473!2.34e-07!3;CL:0000627!2.34e-07!3;CL:0000682!2.34e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.16e-15,6;CL:0000677,3.16e-15,6;CL:0000584,3.16e-15,6;CL:0000075,5.14e-13,7;CL:0000682,1.46e-11,3;CL:0002563,4.64e-10,9;CL:0002251,4.64e-10,9;CL:0000066,3.16e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.73e-24!43;UBERON:0005409!9.52e-24!59;UBERON:0000344!5.60e-21!15;UBERON:0001242!2.09e-17!13;UBERON:0000060!2.09e-17!13;UBERON:0001262!2.09e-17!13;UBERON:0004786!2.09e-17!13;UBERON:0004923!7.24e-12!24;UBERON:0001007!6.47e-11!128;UBERON:0001555!6.47e-11!128;UBERON:0007026!6.47e-11!128;UBERON:0003350!1.15e-10!9;UBERON:0004808!1.15e-10!9;UBERON:0001277!1.15e-10!9;UBERON:0004119!1.29e-10!130;UBERON:0000925!1.29e-10!130;UBERON:0006595!1.29e-10!130;UBERON:0004921!2.50e-09!126;UBERON:0004185!2.50e-09!126;UBERON:0000485!1.68e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.29e-29,31;UBERON:0000344,2.49e-26,15;UBERON:0005409,2.88e-23,47;UBERON:0001242,1.52e-20,13;UBERON:0001262,1.52e-20,13;UBERON:0004786,1.52e-20,13;UBERON:0004923,1.03e-15,24;UBERON:0002108,5.43e-13,4;UBERON:0000331,4.18e-10,3;UBERON:0002116,4.18e-10,3;UBERON:0001204,4.18e-10,3;UBERON:0001168,4.18e-10,3;UBERON:0003350,4.64e-10,9;UBERON:0004808,4.64e-10,9;UBERON:0001277,4.64e-10,9;UBERON:0001007,2.23e-09,116;UBERON:0001555,2.23e-09,116;UBERON:0007026,2.23e-09,116;UBERON:0004119,3.76e-09,118;UBERON:0000925,3.76e-09,118;UBERON:0006595,3.76e-09,118;UBERON:0000485,3.56e-08,11;UBERON:0001962,8.21e-08,2;UBERON:0001961,8.21e-08,2;UBERON:0001744,8.21e-08,2;UBERON:0004921,1.96e-07,114 | |||
|phase1_expression=0,6.2815573375085,5.91499011206397,13.9133537201142,12.5223932486587,1.17515490338323,0.700837921786577,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.52350209173887,6.31655160526522,5.1691439539089,3.01659725760245,1.90023419456374,1.00812051903972,1.10865255327652,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,10.3135720998782,0,0,0,0.403367049246685,0,0.570676878337677,4.2707615539006,1.97638745668813,0.251335208800269,0.397912944082302,0.58489226135736,4.49409704327111,3.6743468478698,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0.655087691238533,0.134864346384821,0,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.2815573375085,5.91499011206397,13.9133537201142,12.5223932486587,1.17515490338323,0.700837921786577,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.52350209173887,6.31655160526522,5.1691439539089,3.01659725760245,1.90023419456374,1.00812051903972,1.10865255327652,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,10.3135720998782,0,0,0,0.403367049246685,0,0.570676878337677,4.2707615539006,1.97638745668813,0.251335208800269,0.397912944082302,0.58489226135736,4.49409704327111,3.6743468478698,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0.655087691238533,0.134864346384821,0,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Ppp1r16a | |||
}} | }} |
Latest revision as of 01:02, 27 September 2015
Short description: | p6@Ppp1r16a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ppp1r16a_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -174bp_to_ENSMUST00000143274_5end |
EntrezGene: | Ppp1r16a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.16e-15 | 6 |
gut absorptive cell | 3.16e-15 | 6 |
enterocyte | 3.16e-15 | 6 |
columnar/cuboidal epithelial cell | 5.14e-13 | 7 |
M cell of gut | 1.46e-11 | 3 |
intestinal epithelial cell | 4.64e-10 | 9 |
epithelial cell of alimentary canal | 4.64e-10 | 9 |
epithelial cell | 3.16e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.29e-29 | 31 |
mucosa | 2.49e-26 | 15 |
gastrointestinal system | 2.88e-23 | 47 |
intestinal mucosa | 1.52e-20 | 13 |
wall of intestine | 1.52e-20 | 13 |
gastrointestinal system mucosa | 1.52e-20 | 13 |
organ component layer | 1.03e-15 | 24 |
small intestine | 5.43e-13 | 4 |
ileal mucosa | 4.18e-10 | 3 |
ileum | 4.18e-10 | 3 |
mucosa of small intestine | 4.18e-10 | 3 |
wall of small intestine | 4.18e-10 | 3 |
epithelium of mucosa | 4.64e-10 | 9 |
gastrointestinal system epithelium | 4.64e-10 | 9 |
intestinal epithelium | 4.64e-10 | 9 |
digestive system | 2.23e-09 | 116 |
digestive tract | 2.23e-09 | 116 |
primitive gut | 2.23e-09 | 116 |
endoderm-derived structure | 3.76e-09 | 118 |
endoderm | 3.76e-09 | 118 |
presumptive endoderm | 3.76e-09 | 118 |
simple columnar epithelium | 3.56e-08 | 11 |
gut-associated lymphoid tissue | 8.21e-08 | 2 |
mucosa-associated lymphoid tissue | 8.21e-08 | 2 |
lymphoid tissue | 8.21e-08 | 2 |
subdivision of digestive tract | 1.96e-07 | 114 |