FFCP PHASE1:Mm9::chr16:55816886..55816906,+: Difference between revisions
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|id=chr16:55816886..55816906,+
|short_description=p@chr16:55816886..55816906,+
|description=CAGE_peak_at_chr16:55816886..55816906,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=906 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:55816886..55816906,+ | |||
|description=CAGE_peak_at_chr16:55816886..55816906,+ | |||
|id=chr16:55816886..55816906,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.89e-14!9;CL:0002251!5.89e-14!9;CL:0002076!1.24e-10!15;CL:0000066!1.66e-10!25;CL:0000239!6.43e-10!6;CL:0000677!6.43e-10!6;CL:0000212!6.43e-10!6;CL:0000584!6.43e-10!6;CL:0000223!1.30e-08!20;CL:0000075!2.58e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.52e-28,9;CL:0002251,8.52e-28,9;CL:0000239,3.13e-19,6;CL:0000677,3.13e-19,6;CL:0000584,3.13e-19,6;CL:0000075,2.17e-16,7;CL:0000066,4.80e-16,25;CL:0002076,4.99e-16,15;CL:0000223,1.30e-11,20;CL:0002250,3.98e-10,3;CL:0000682,9.17e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.69e-31!59;UBERON:0000160!6.02e-31!43;UBERON:0000344!8.93e-21!15;UBERON:0001242!3.66e-18!13;UBERON:0000060!3.66e-18!13;UBERON:0001262!3.66e-18!13;UBERON:0004786!3.66e-18!13;UBERON:0004119!4.93e-18!130;UBERON:0000925!4.93e-18!130;UBERON:0006595!4.93e-18!130;UBERON:0001007!1.45e-17!128;UBERON:0001555!1.45e-17!128;UBERON:0007026!1.45e-17!128;UBERON:0004921!7.59e-16!126;UBERON:0004185!7.59e-16!126;UBERON:0003350!5.89e-14!9;UBERON:0004808!5.89e-14!9;UBERON:0001277!5.89e-14!9;UBERON:0004923!9.99e-13!24;UBERON:0000485!5.99e-11!11;UBERON:0002108!7.30e-10!16;UBERON:0001045!2.62e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.10e-28,15;UBERON:0000160,1.72e-28,31;UBERON:0003350,8.52e-28,9;UBERON:0004808,8.52e-28,9;UBERON:0001277,8.52e-28,9;UBERON:0001242,2.17e-23,13;UBERON:0001262,2.17e-23,13;UBERON:0004786,2.17e-23,13;UBERON:0000485,1.89e-22,11;UBERON:0005409,3.37e-22,47;UBERON:0004923,5.40e-17,24;UBERON:0001007,2.16e-09,116;UBERON:0001555,2.16e-09,116;UBERON:0007026,2.16e-09,116;UBERON:0004119,3.75e-09,118;UBERON:0000925,3.75e-09,118;UBERON:0006595,3.75e-09,118;UBERON:0004921,1.41e-07,114;UBERON:0001962,5.50e-07,2;UBERON:0001961,5.50e-07,2;UBERON:0001744,5.50e-07,2 | |||
|phase1_expression=0,2.79180326111489,4.54999239389536,8.16653370528441,7.01254021924886,5.03637815735669,7.00837921786577,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,0,0,2.71987118748791,2.98232065387321,3.44539178469012,2.58457197695445,3.878482188346,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,12.7094712690561,1.16364251750945,18.5794114198756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7988960258821,1.05780226665418,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.570676878337677,1.42358718463353,0.164698954724011,1.25667604400135,0,0,2.69645822596266,0,4.38110801159608,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,3.98235415019888,0,0,0,0.885905678642318,0.307435147943927,0.775284879504663,0,0.356497378384721,1.26414703174326,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0,0.209088296014469,0.436725127492355,0.404593039154462,0.578574190077352,0.26175594198403,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.183151624267265,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,2.79180326111489,4.54999239389536,8.16653370528441,7.01254021924886,5.03637815735669,7.00837921786577,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,0,0,2.71987118748791,2.98232065387321,3.44539178469012,2.58457197695445,3.878482188346,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,12.7094712690561,1.16364251750945,18.5794114198756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7988960258821,1.05780226665418,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.570676878337677,1.42358718463353,0.164698954724011,1.25667604400135,0,0,2.69645822596266,0,4.38110801159608,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,3.98235415019888,0,0,0,0.885905678642318,0.307435147943927,0.775284879504663,0,0.356497378384721,1.26414703174326,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0,0.209088296014469,0.436725127492355,0.404593039154462,0.578574190077352,0.26175594198403,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.183151624267265,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr16:55816886..55816906,+ | |||
}} | }} |
Latest revision as of 23:17, 3 August 2015
Short description: | p@chr16:55816886..55816906, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:55816886..55816906, + |
Coexpression cluster: | MCL_coexpression_mm9:906 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.52e-28 | 9 |
epithelial cell of alimentary canal | 8.52e-28 | 9 |
brush border epithelial cell | 3.13e-19 | 6 |
gut absorptive cell | 3.13e-19 | 6 |
enterocyte | 3.13e-19 | 6 |
columnar/cuboidal epithelial cell | 2.17e-16 | 7 |
epithelial cell | 4.80e-16 | 25 |
endo-epithelial cell | 4.99e-16 | 15 |
endodermal cell | 1.30e-11 | 20 |
intestinal crypt stem cell | 3.98e-10 | 3 |
M cell of gut | 9.17e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.10e-28 | 15 |
intestine | 1.72e-28 | 31 |
epithelium of mucosa | 8.52e-28 | 9 |
gastrointestinal system epithelium | 8.52e-28 | 9 |
intestinal epithelium | 8.52e-28 | 9 |
intestinal mucosa | 2.17e-23 | 13 |
wall of intestine | 2.17e-23 | 13 |
gastrointestinal system mucosa | 2.17e-23 | 13 |
simple columnar epithelium | 1.89e-22 | 11 |
gastrointestinal system | 3.37e-22 | 47 |
organ component layer | 5.40e-17 | 24 |
digestive system | 2.16e-09 | 116 |
digestive tract | 2.16e-09 | 116 |
primitive gut | 2.16e-09 | 116 |
endoderm-derived structure | 3.75e-09 | 118 |
endoderm | 3.75e-09 | 118 |
presumptive endoderm | 3.75e-09 | 118 |
subdivision of digestive tract | 1.41e-07 | 114 |
gut-associated lymphoid tissue | 5.50e-07 | 2 |
mucosa-associated lymphoid tissue | 5.50e-07 | 2 |
lymphoid tissue | 5.50e-07 | 2 |