FFCP PHASE1:Mm9::chr17:39983292..39983306,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39983292..39983306,+
|short_description=p@chr17:39983292..39983306,+
|description=CAGE_peak_at_chr17:39983292..39983306,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1399 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39983292..39983306,+ | |||
|description=CAGE_peak_at_chr17:39983292..39983306,+ | |||
|id=chr17:39983292..39983306,+ | |||
|ontology_enrichment_celltype=CL:0000144!2.19e-33!121;CL:0000012!2.19e-33!121;CL:0002371!4.89e-32!118;CL:0000548!2.06e-30!115;CL:0000004!2.06e-30!115;CL:0000255!2.06e-30!115;CL:0000063!9.05e-26!66;CL:0000034!1.34e-20!97;CL:0000219!2.66e-18!54;CL:0000723!6.22e-18!91;CL:0000048!6.22e-18!91;CL:0002320!1.12e-15!46;CL:0000134!1.12e-15!46;CL:0002031!1.39e-12!25;CL:0000988!5.23e-12!32;CL:0002032!5.23e-12!32;CL:0000037!5.23e-12!32;CL:0000566!5.23e-12!32;CL:0000837!5.23e-12!32;CL:0002321!5.51e-12!70;CL:0000220!5.51e-12!70;CL:0000066!1.02e-11!25;CL:0000223!7.66e-10!20;CL:0002076!2.86e-08!15;CL:0000049!1.56e-07!19;CL:0000738!3.26e-07!17;CL:0002087!3.26e-07!17;CL:0000839!4.03e-07!13;CL:0000838!8.69e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.34e-20,97;CL:0000219,2.66e-18,54;CL:0000723,6.22e-18,91;CL:0000048,6.22e-18,91;CL:0002320,1.12e-15,46;CL:0000134,1.12e-15,46;CL:0002031,1.39e-12,25;CL:0000988,5.23e-12,32;CL:0002032,5.23e-12,32;CL:0000037,5.23e-12,32;CL:0000837,5.23e-12,32;CL:0002321,5.51e-12,70;CL:0000066,1.02e-11,25;CL:0000223,7.66e-10,20;CL:0002076,2.86e-08,15;CL:0000049,1.56e-07,19;CL:0000738,3.26e-07,17;CL:0002087,3.26e-07,17;CL:0000839,4.03e-07,13;CL:0000838,8.69e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.12e-15!46;UBERON:0000344!5.40e-08!15;UBERON:0001242!8.84e-07!13;UBERON:0000060!8.84e-07!13;UBERON:0001262!8.84e-07!13;UBERON:0004786!8.84e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.12e-15,46;UBERON:0000344,5.40e-08,15;UBERON:0001242,8.84e-07,13;UBERON:0001262,8.84e-07,13;UBERON:0004786,8.84e-07,13 | |||
|phase1_expression=65.3407296187559,251.960244315619,283.464526139681,3883.6404731797,5213.32275728158,120.201558688913,2024.72075604142,1261.40574670076,1130.95580504434,1534.29297004067,827.838876370317,439.145735269327,952.560861337229,861.178384229543,10.6595123781012,970.868907134215,1932.88946926807,1306.64428891382,754.952071433198,1762.91461356902,7.65389611359628,8.43973085207525,1070.13553610222,1430.17226735026,1809.8098183389,231.415481538353,183.504610363766,154.708345068468,2003.60693474801,94.0072384004542,127.273313116145,10378.9413270242,255.251886847597,18177.8488124708,87.5220407846362,107.221346256228,103.718032981283,127.652147374757,77.3521991078562,197.368451478122,104.11697338149,107.921186623434,138.85596096691,4.53228544712078,6.2853697356099,9.54443111240744,64.1560902365392,19.4042389178597,45.6947260087701,19.6374198065026,25.3375423141906,560.635001023389,1038.57433149739,2046.246602614,1144.73547987923,10.5476368774738,8.5960031981627,26.814948798427,20.4339625468194,8.46385566835253,174.937467367705,37.6117430596737,275.681386794453,22.9474427906757,14.8329954385046,29.8401648277362,23.3688086204356,45.3377600279434,31.1068836925433,11.2054928815303,20.6118462124354,23.7090317055157,17.8903518170807,17.3936934885235,16.9646483702278,61.5876587028714,13.2139057199266,10.9811110753261,15.3606533256243,23.8714180791651,17.2911646408554,17.1901412283731,22.6138229191119,14.069065250792,18.1829914854404,11.7851434189467,11.5321061447273,26.0959224155421,350.08219177931,412.771861303262,1026.12029000394,5457.66865169293,57.7975633651588,39.9380361811985,102.664673956732,46.5947962581229,2.24711072210803,3.57903677413921,2531.35482885035,1561.05424018668,90.8440057559589,709.645420101178,76.4415719119937,113.770672504533,933.076386758333,975.688841944605,878.601485435693,4.79572294820052,3.88406825470758,5.93768556259299,8.67426633830679,11.8741536541735,5.5347719341454,7.53613202763113,11.9940481278419,16.5879900555172,11.1237735480468,2.74738778147832,4.42305275974937,10.676612096529,7.50861162765338,13.5765070877862,35.4144346314432,4.68449275218475,9.21565509979202,14.5610521468897,124.607729486157,55.1910512513935,98.225285527479,7.78911324905078,4.11750542536764,11.4345460422707,9.21268897019065,3.06858548796397,7.68815764870372,9.08551073179443,10.6931332042832,13.1871388846699,10.108910337347,7.36546495602659,3.3831315170303,12.644615743841,14.0448461248172,3.91832526372859,6.19132142277083,1.40925092313335,12.3686276418842,6.20888089773638,4.74249584452253,8.13156144721623,5.80638709741031,10.302199424096,4.17070873838397,5.92028683087683,3.90986059175093,5.17489093728082,107.438617658925,123.526995415063,2.84163499395593,12.2204205795946,2.57978665979206,7.74266864282364,9.2330446878232,2.75469924446365,6.32495162838251,6.74348439776183,3.48755421819505,11.3262382096154,13.3293478429919,6.895033491322,10.2957388123237,7.74859933354261,14.9294078397914,18.2520729514106,9.88362758251398,10.496270462687,14.8688452342709,10.5780226665418,4.90562976231038,7.19933682767359,5.7990357594942,10.8909103296605,8.00560957841533,4.75564065281398,26.5736274464927,20.5873693405014,20.6094871216221,10.9426059622633,5.06906626509712,37.7504151634773,8.64552199498777,4.18196673834171,12.5180814629034,7.76889885746156,4.50830942692322,2.44381593414377,4.84881217919064,7.22398944870281,9.99137286563265,5.90440591918409,4.55296310739987,11.3525390808056,25.791378556582,8.67594549723689,6.4864468387357,7.19558759631532,8.11440485554012,7.71766911207734,12.2220408855082,16.686375972147,17.3484692649288,15.6500005517206,375.235019036395,7.81495990103857,22.4667124642484,9.85057623993736,30.4975602987251,22.1924019827149,6.09685527549795,11.9379589415405,7.00749398700711,7.1292936025579,5.39787571063555,4.85768146581266,10.4739201989846,13.8544889979037,2.04925687338048,4.87222317227305,6.218735977642,13.764518436122,7.25276923836761,15.6220983268033,1417.43806902916,1232.4902795332,10.3270497333998,9.3818493743609,9.63303539926752,14.1826140776566,45.7378497600924,9.08895337935743,17.0374438484779,10.9322848403059,9.90947629570875,15.7719406648684,15.3731085116852,6.79383673893198,12.5491317519217,17.2430956167674,15.8115111178609,7.39039027770156,4.25820255624806,4.98583690268315,10.2618784392753,5.1140738121486,78.3196316205781,11.4106898992841,5.13950046840077,13.9567759019365,17.1275097870848,27.6691633149535,16.2809824695979,15.6319503675327,22.4593348382374,16.4339114126624,40.0590712584995,104.166898680669,10.8940673841212,4.32146625675145,12.8065096944927,9.21649250635847,12.945837055886,8.56170324489939,6.2528627828806,41.7116980287001,10.0908834467395,19.0648863777438,12.1290618930229,4.78170133530292,4.19807509409354,8.08193194037288,9.90790455226033,9.35603128546849,6.99554007911642,5.93360966433631,8.37267315909478,3.30218988741156,4.25947412950337,2.63715839806567,2.05041341581538,9.60868327467395,56.9427740479415,49.2629112179276,60.2551885787288,0.954670618015114,6.80122386199441,6.70954241518601,5.07625101862466,4.59994251231831,6.55087691238533,13.6212989848669,7.52146447100557,23.8197907205467,6.86959358446502,17.3975007664339,10.1464728963154,1.49516546043979,4.13646226142744,2.13896307178452,10.074466231263,6.08242051766801,13.2613679669702,12.1090077904874,10.0664970648682,4.34851417486811,7.4887801627045,4.10814456816632,4.25722952109345,12.2226039026144,5.06691209613401,9.667441566044,9.93406773906325,8.89446326447769,6.64602872285597,11.4092088441407,4.19137436602499,9.57848758799985,5.84747284438514,6.15755786498109,6.42822961998629,7.02864189207155,777.172822762601,589.689179494084,743.728850492868,6.37525660306228,8.82107634620555,3.47988086107804,12.0046292284277,11.5361583928134,12.4245405375755,11.5081309126794,9.73922372846974,947.598447443093,13.7016503954128,3.0215755895588,20.925697507186,9.00642406448441,8.15656336171568,7.24864436452548,6.64239024538731,1.19707462020309,3.92687293234509,9.96737539980005,4.19226325255965,7.16989682955055,17.1129980407244,9.88968274746692,3.85103051510178,10.1078884705519,10.6461305953901,6.97917463128482,7.30403758265083,6.01836432605771,8.44301393647515,3.33405583898152,8.34367146802959,8.29509647993932,7.41754621445952,11.1871179302142,9.25746981440622,7.27650805253284,4.76872379894642,5.52316383202848,3.76437521661322,5.16149108139227,8.96347067076586,11.8381370147029,9.50628796921032,14.5896990631012,10.5585166130515,13.1996006383255,21.2800142448238,4.33823155320705,10.0311437710194,12.7403394748352,3.97683734357194,2.79332370262788,13.390183244819,5.07360263974886,7.41977073985349 | |phase1_expression=65.3407296187559,251.960244315619,283.464526139681,3883.6404731797,5213.32275728158,120.201558688913,2024.72075604142,1261.40574670076,1130.95580504434,1534.29297004067,827.838876370317,439.145735269327,952.560861337229,861.178384229543,10.6595123781012,970.868907134215,1932.88946926807,1306.64428891382,754.952071433198,1762.91461356902,7.65389611359628,8.43973085207525,1070.13553610222,1430.17226735026,1809.8098183389,231.415481538353,183.504610363766,154.708345068468,2003.60693474801,94.0072384004542,127.273313116145,10378.9413270242,255.251886847597,18177.8488124708,87.5220407846362,107.221346256228,103.718032981283,127.652147374757,77.3521991078562,197.368451478122,104.11697338149,107.921186623434,138.85596096691,4.53228544712078,6.2853697356099,9.54443111240744,64.1560902365392,19.4042389178597,45.6947260087701,19.6374198065026,25.3375423141906,560.635001023389,1038.57433149739,2046.246602614,1144.73547987923,10.5476368774738,8.5960031981627,26.814948798427,20.4339625468194,8.46385566835253,174.937467367705,37.6117430596737,275.681386794453,22.9474427906757,14.8329954385046,29.8401648277362,23.3688086204356,45.3377600279434,31.1068836925433,11.2054928815303,20.6118462124354,23.7090317055157,17.8903518170807,17.3936934885235,16.9646483702278,61.5876587028714,13.2139057199266,10.9811110753261,15.3606533256243,23.8714180791651,17.2911646408554,17.1901412283731,22.6138229191119,14.069065250792,18.1829914854404,11.7851434189467,11.5321061447273,26.0959224155421,350.08219177931,412.771861303262,1026.12029000394,5457.66865169293,57.7975633651588,39.9380361811985,102.664673956732,46.5947962581229,2.24711072210803,3.57903677413921,2531.35482885035,1561.05424018668,90.8440057559589,709.645420101178,76.4415719119937,113.770672504533,933.076386758333,975.688841944605,878.601485435693,4.79572294820052,3.88406825470758,5.93768556259299,8.67426633830679,11.8741536541735,5.5347719341454,7.53613202763113,11.9940481278419,16.5879900555172,11.1237735480468,2.74738778147832,4.42305275974937,10.676612096529,7.50861162765338,13.5765070877862,35.4144346314432,4.68449275218475,9.21565509979202,14.5610521468897,124.607729486157,55.1910512513935,98.225285527479,7.78911324905078,4.11750542536764,11.4345460422707,9.21268897019065,3.06858548796397,7.68815764870372,9.08551073179443,10.6931332042832,13.1871388846699,10.108910337347,7.36546495602659,3.3831315170303,12.644615743841,14.0448461248172,3.91832526372859,6.19132142277083,1.40925092313335,12.3686276418842,6.20888089773638,4.74249584452253,8.13156144721623,5.80638709741031,10.302199424096,4.17070873838397,5.92028683087683,3.90986059175093,5.17489093728082,107.438617658925,123.526995415063,2.84163499395593,12.2204205795946,2.57978665979206,7.74266864282364,9.2330446878232,2.75469924446365,6.32495162838251,6.74348439776183,3.48755421819505,11.3262382096154,13.3293478429919,6.895033491322,10.2957388123237,7.74859933354261,14.9294078397914,18.2520729514106,9.88362758251398,10.496270462687,14.8688452342709,10.5780226665418,4.90562976231038,7.19933682767359,5.7990357594942,10.8909103296605,8.00560957841533,4.75564065281398,26.5736274464927,20.5873693405014,20.6094871216221,10.9426059622633,5.06906626509712,37.7504151634773,8.64552199498777,4.18196673834171,12.5180814629034,7.76889885746156,4.50830942692322,2.44381593414377,4.84881217919064,7.22398944870281,9.99137286563265,5.90440591918409,4.55296310739987,11.3525390808056,25.791378556582,8.67594549723689,6.4864468387357,7.19558759631532,8.11440485554012,7.71766911207734,12.2220408855082,16.686375972147,17.3484692649288,15.6500005517206,375.235019036395,7.81495990103857,22.4667124642484,9.85057623993736,30.4975602987251,22.1924019827149,6.09685527549795,11.9379589415405,7.00749398700711,7.1292936025579,5.39787571063555,4.85768146581266,10.4739201989846,13.8544889979037,2.04925687338048,4.87222317227305,6.218735977642,13.764518436122,7.25276923836761,15.6220983268033,1417.43806902916,1232.4902795332,10.3270497333998,9.3818493743609,9.63303539926752,14.1826140776566,45.7378497600924,9.08895337935743,17.0374438484779,10.9322848403059,9.90947629570875,15.7719406648684,15.3731085116852,6.79383673893198,12.5491317519217,17.2430956167674,15.8115111178609,7.39039027770156,4.25820255624806,4.98583690268315,10.2618784392753,5.1140738121486,78.3196316205781,11.4106898992841,5.13950046840077,13.9567759019365,17.1275097870848,27.6691633149535,16.2809824695979,15.6319503675327,22.4593348382374,16.4339114126624,40.0590712584995,104.166898680669,10.8940673841212,4.32146625675145,12.8065096944927,9.21649250635847,12.945837055886,8.56170324489939,6.2528627828806,41.7116980287001,10.0908834467395,19.0648863777438,12.1290618930229,4.78170133530292,4.19807509409354,8.08193194037288,9.90790455226033,9.35603128546849,6.99554007911642,5.93360966433631,8.37267315909478,3.30218988741156,4.25947412950337,2.63715839806567,2.05041341581538,9.60868327467395,56.9427740479415,49.2629112179276,60.2551885787288,0.954670618015114,6.80122386199441,6.70954241518601,5.07625101862466,4.59994251231831,6.55087691238533,13.6212989848669,7.52146447100557,23.8197907205467,6.86959358446502,17.3975007664339,10.1464728963154,1.49516546043979,4.13646226142744,2.13896307178452,10.074466231263,6.08242051766801,13.2613679669702,12.1090077904874,10.0664970648682,4.34851417486811,7.4887801627045,4.10814456816632,4.25722952109345,12.2226039026144,5.06691209613401,9.667441566044,9.93406773906325,8.89446326447769,6.64602872285597,11.4092088441407,4.19137436602499,9.57848758799985,5.84747284438514,6.15755786498109,6.42822961998629,7.02864189207155,777.172822762601,589.689179494084,743.728850492868,6.37525660306228,8.82107634620555,3.47988086107804,12.0046292284277,11.5361583928134,12.4245405375755,11.5081309126794,9.73922372846974,947.598447443093,13.7016503954128,3.0215755895588,20.925697507186,9.00642406448441,8.15656336171568,7.24864436452548,6.64239024538731,1.19707462020309,3.92687293234509,9.96737539980005,4.19226325255965,7.16989682955055,17.1129980407244,9.88968274746692,3.85103051510178,10.1078884705519,10.6461305953901,6.97917463128482,7.30403758265083,6.01836432605771,8.44301393647515,3.33405583898152,8.34367146802959,8.29509647993932,7.41754621445952,11.1871179302142,9.25746981440622,7.27650805253284,4.76872379894642,5.52316383202848,3.76437521661322,5.16149108139227,8.96347067076586,11.8381370147029,9.50628796921032,14.5896990631012,10.5585166130515,13.1996006383255,21.2800142448238,4.33823155320705,10.0311437710194,12.7403394748352,3.97683734357194,2.79332370262788,13.390183244819,5.07360263974886,7.41977073985349 | ||
|short_description=p@chr17:39983292..39983306,+ | |||
}} | }} |
Latest revision as of 21:20, 4 August 2015
Short description: | p@chr17:39983292..39983306, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39983292..39983306, + |
Coexpression cluster: | MCL_coexpression_mm9:1399 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.34e-20 | 97 |
motile cell | 2.66e-18 | 54 |
somatic stem cell | 6.22e-18 | 91 |
multi fate stem cell | 6.22e-18 | 91 |
connective tissue cell | 1.12e-15 | 46 |
mesenchymal cell | 1.12e-15 | 46 |
hematopoietic lineage restricted progenitor cell | 1.39e-12 | 25 |
hematopoietic cell | 5.23e-12 | 32 |
hematopoietic oligopotent progenitor cell | 5.23e-12 | 32 |
hematopoietic stem cell | 5.23e-12 | 32 |
hematopoietic multipotent progenitor cell | 5.23e-12 | 32 |
embryonic cell | 5.51e-12 | 70 |
epithelial cell | 1.02e-11 | 25 |
endodermal cell | 7.66e-10 | 20 |
endo-epithelial cell | 2.86e-08 | 15 |
common myeloid progenitor | 1.56e-07 | 19 |
leukocyte | 3.26e-07 | 17 |
nongranular leukocyte | 3.26e-07 | 17 |
myeloid lineage restricted progenitor cell | 4.03e-07 | 13 |
lymphoid lineage restricted progenitor cell | 8.69e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.12e-15 | 46 |
mucosa | 5.40e-08 | 15 |
intestinal mucosa | 8.84e-07 | 13 |
wall of intestine | 8.84e-07 | 13 |
gastrointestinal system mucosa | 8.84e-07 | 13 |