FFCP PHASE2:Hg19::chr16:20911174..20911242,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:57149 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:25074 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25074 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O43325 | ||
|association_with_transcript=-314bp_to_ENST00000439021,NM_020424,uc010bwi.1,uc010bwj.2,uc010bwk.2_5end | |association_with_transcript=-314bp_to_ENST00000439021,NM_020424,uc010bwi.1,uc010bwj.2,uc010bwk.2_5end | ||
|cluster_id=chr16:20911174..20911242,+ | |cluster_id=chr16:20911174..20911242,+ |
Latest revision as of 03:05, 25 September 2015
Short description: | p4@LYRM1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LYRM1_5end |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | -314bp_to_ENST00000439021, NM_020424, uc010bwi.1, uc010bwj.2, uc010bwk.2_5end |
EntrezGene: | LYRM1 |
HGNC: | 25074 |
UniProt: | O43325 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LYRM1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.79e-15 | 121 |
fat cell | 2.57e-10 | 15 |
muscle precursor cell | 3.41e-10 | 58 |
myoblast | 3.41e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.41e-10 | 58 |
epithelial cell of nephron | 4.72e-10 | 15 |
kidney cell | 8.01e-10 | 17 |
kidney epithelial cell | 8.01e-10 | 17 |
muscle cell | 2.27e-09 | 55 |
embryonic cell | 6.96e-09 | 250 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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mesenchyme | 3.94e-18 | 160 |
entire embryonic mesenchyme | 3.94e-18 | 160 |
trunk | 5.67e-17 | 199 |
trunk mesenchyme | 3.67e-16 | 122 |
epithelial tube | 3.99e-15 | 117 |
epithelial vesicle | 1.01e-13 | 78 |
unilaminar epithelium | 5.12e-12 | 148 |
abdominal segment of trunk | 2.68e-11 | 60 |
abdomen | 2.68e-11 | 60 |
somite | 3.35e-11 | 71 |
Showing 1 to 10 of 50 entries