FFCP PHASE2:Hg19::chr17:38171624..38171635,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1440 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2438 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2438 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P09919,Q8N4W3,Q6FH65,A8MXR7 | ||
|association_with_transcript=10bp_to_ENST00000394149,NM_000759,NM_001178147,NM_172219,NM_172220,NR_033662_5end | |association_with_transcript=10bp_to_ENST00000394149,NM_000759,NM_001178147,NM_172219,NM_172220,NR_033662_5end | ||
|cluster_id=chr17:38171624..38171635,+ | |cluster_id=chr17:38171624..38171635,+ |
Latest revision as of 23:33, 19 September 2015
Short description: | p2@CSF3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSF3_5end |
Coexpression cluster: | C1432_mesenchymal_Smooth_Lymphatic_Preadipocyte_Sebocyte_CD14_anaplastic |
Association with transcript: | 10bp_to_ENST00000394149, NM_000759, NM_001178147, NM_172219, NM_172220, NR_033662_5end |
EntrezGene: | CSF3 |
HGNC: | 2438 |
UniProt: | P09919Q8N4W3Q6FH65A8MXR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@CSF3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.67e-17 | 32 |
muscle precursor cell | 1.11e-14 | 58 |
myoblast | 1.11e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-14 | 58 |
aortic smooth muscle cell | 1.59e-14 | 10 |
embryonic cell | 8.43e-13 | 250 |
smooth muscle cell | 1.18e-11 | 43 |
smooth muscle myoblast | 1.18e-11 | 43 |
muscle cell | 1.82e-11 | 55 |
electrically responsive cell | 8.07e-10 | 61 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
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systemic artery | 1.26e-16 | 33 |
systemic arterial system | 1.26e-16 | 33 |
multilaminar epithelium | 2.64e-16 | 83 |
blood vessel smooth muscle | 1.59e-14 | 10 |
arterial system smooth muscle | 1.59e-14 | 10 |
artery smooth muscle tissue | 1.59e-14 | 10 |
aorta smooth muscle tissue | 1.59e-14 | 10 |
somite | 1.69e-14 | 71 |
presomitic mesoderm | 1.69e-14 | 71 |
presumptive segmental plate | 1.69e-14 | 71 |
Showing 1 to 10 of 53 entries