FFCP PHASE1:Hg19::chr19:11546153..11546168,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9411 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P14314,A8K318 | ||
|association_with_transcript=-100bp_to_ENST00000252455,ENST00000412601,NM_001001329,NM_002743,uc002mrt.2,uc002mru.2,uc010dya.2,uc010xlz.1_5end | |association_with_transcript=-100bp_to_ENST00000252455,ENST00000412601,NM_001001329,NM_002743,uc002mrt.2,uc002mru.2,uc010dya.2,uc010xlz.1_5end | ||
|cluster_id=chr19:11546153..11546168,+ | |cluster_id=chr19:11546153..11546168,+ |
Latest revision as of 05:21, 25 September 2015
Short description: | p16@PRKCSH |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PRKCSH_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -100bp_to_ENST00000252455, ENST00000412601, NM_001001329, NM_002743, uc002mrt.2, uc002mru.2, uc010dya.2, uc010xlz.1_5end |
EntrezGene: | PRKCSH |
HGNC: | 9411 |
UniProt: | P14314A8K318 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p16@PRKCSH |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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smooth muscle cell of trachea | 2.05e-15 | 2 |
smooth muscle cell of the internal thoracic artery | 2.74e-15 | 2 |
smooth muscle cell of the coronary artery | 8.99e-11 | 3 |
duct epithelial cell | 1.09e-10 | 3 |
branched duct epithelial cell | 1.09e-10 | 3 |
tracheal epithelial cell | 1.09e-10 | 3 |
tracheoblast | 1.09e-10 | 3 |
smooth muscle cell of the subclavian artery | 6.77e-07 | 5 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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trachea | 4.73e-17 | 7 |
respiratory airway | 4.73e-17 | 7 |
testis | 2.65e-15 | 8 |
internal thoracic artery | 2.74e-15 | 2 |
male reproductive organ | 2.07e-11 | 11 |
coronary artery | 8.99e-11 | 3 |
tracheobronchial tree | 1.71e-08 | 15 |
lower respiratory tract | 1.71e-08 | 15 |
heart blood vessel | 5.70e-07 | 5 |
coronary vessel | 5.70e-07 | 5 |
Showing 1 to 10 of 12 entries