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FFCP PHASE1:Hg19::chr19:11546153..11546168,+: Difference between revisions

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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:5589
|EntrezGene=5589
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:9411
|HGNC=9411
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:P14314,uniprot:A8K318
|UniProt=P14314,A8K318
|association_with_transcript=-100bp_to_ENST00000252455,ENST00000412601,NM_001001329,NM_002743,uc002mrt.2,uc002mru.2,uc010dya.2,uc010xlz.1_5end
|association_with_transcript=-100bp_to_ENST00000252455,ENST00000412601,NM_001001329,NM_002743,uc002mrt.2,uc002mru.2,uc010dya.2,uc010xlz.1_5end
|cluster_id=chr19:11546153..11546168,+
|cluster_id=chr19:11546153..11546168,+

Latest revision as of 05:21, 25 September 2015

Short description:p16@PRKCSH
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_16_at_PRKCSH_5end
Coexpression cluster:C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate
Association with transcript: -100bp_to_ENST00000252455, ENST00000412601, NM_001001329, NM_002743, uc002mrt.2, uc002mru.2, uc010dya.2, uc010xlz.1_5end
EntrezGene:PRKCSH
HGNC: 9411
UniProt: P14314A8K318
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data