FFCP PHASE1:Mm9::chr19:6058321..6058359,+: Difference between revisions
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|id=chr19:6058321..6058359,+
|short_description=p@chr19:6058321..6058359,+
|description=CAGE_peak_at_chr19:6058321..6058359,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6058321..6058359,+ | |||
|description=CAGE_peak_at_chr19:6058321..6058359,+ | |||
|id=chr19:6058321..6058359,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.69e-10!6;CL:0000677!1.69e-10!6;CL:0000212!1.69e-10!6;CL:0000584!1.69e-10!6;CL:0000075!7.42e-09!7;CL:0002563!7.51e-09!9;CL:0002251!7.51e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.77e-13,3;CL:0000239,2.56e-11,6;CL:0000677,2.56e-11,6;CL:0000584,2.56e-11,6;CL:0000075,1.02e-09,7;CL:0002563,1.40e-07,9;CL:0002251,1.40e-07,9;CL:0000066,2.54e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.95e-18!15;UBERON:0001242!2.62e-15!13;UBERON:0000060!2.62e-15!13;UBERON:0001262!2.62e-15!13;UBERON:0004786!2.62e-15!13;UBERON:0000160!5.61e-12!43;UBERON:0005409!3.47e-11!59;UBERON:0004923!4.66e-10!24;UBERON:0003350!7.51e-09!9;UBERON:0004808!7.51e-09!9;UBERON:0001277!7.51e-09!9;UBERON:0001007!2.32e-07!128;UBERON:0001555!2.32e-07!128;UBERON:0007026!2.32e-07!128;UBERON:0004119!4.08e-07!130;UBERON:0000925!4.08e-07!130;UBERON:0006595!4.08e-07!130;UBERON:0000485!5.31e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.90e-31,31;UBERON:0000344,3.03e-26,15;UBERON:0005409,1.73e-22,47;UBERON:0001242,5.84e-20,13;UBERON:0001262,5.84e-20,13;UBERON:0004786,5.84e-20,13;UBERON:0002108,6.18e-17,4;UBERON:0004923,8.20e-16,24;UBERON:0000331,1.36e-13,3;UBERON:0002116,1.36e-13,3;UBERON:0001204,1.36e-13,3;UBERON:0001168,1.36e-13,3;UBERON:0001007,1.30e-09,116;UBERON:0001555,1.30e-09,116;UBERON:0007026,1.30e-09,116;UBERON:0004119,2.15e-09,118;UBERON:0000925,2.15e-09,118;UBERON:0006595,2.15e-09,118;UBERON:0001155,6.82e-09,2;UBERON:0000059,6.82e-09,2;UBERON:0001962,1.41e-08,2;UBERON:0001961,1.41e-08,2;UBERON:0001744,1.41e-08,2;UBERON:0003350,1.40e-07,9;UBERON:0004808,1.40e-07,9;UBERON:0001277,1.40e-07,9;UBERON:0004921,1.60e-07,114 | |||
|phase1_expression=0,2.79180326111489,3.18499467572675,5.44435580352294,6.01074875935617,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,1.75991665072747,2.52350209173887,8.03924749761028,4.73838195774982,1.50829862880122,11.9714754257516,9.32511480111744,3.32595765982957,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,2.90895623329899,0,0,0,0,0,0,4.74529061544512,0.164698954724011,0,0,0,2.69645822596266,4.10662294761919,4.38110801159608,0,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,2.33306951925227,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,3.18499467572675,5.44435580352294,6.01074875935617,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,1.75991665072747,2.52350209173887,8.03924749761028,4.73838195774982,1.50829862880122,11.9714754257516,9.32511480111744,3.32595765982957,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,2.90895623329899,0,0,0,0,0,0,4.74529061544512,0.164698954724011,0,0,0,2.69645822596266,4.10662294761919,4.38110801159608,0,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,2.33306951925227,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:6058321..6058359,+ | |||
}} | }} |
Latest revision as of 11:36, 4 August 2015
Short description: | p@chr19:6058321..6058359, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6058321..6058359, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.77e-13 | 3 |
brush border epithelial cell | 2.56e-11 | 6 |
gut absorptive cell | 2.56e-11 | 6 |
enterocyte | 2.56e-11 | 6 |
columnar/cuboidal epithelial cell | 1.02e-09 | 7 |
intestinal epithelial cell | 1.40e-07 | 9 |
epithelial cell of alimentary canal | 1.40e-07 | 9 |
epithelial cell | 2.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.90e-31 | 31 |
mucosa | 3.03e-26 | 15 |
gastrointestinal system | 1.73e-22 | 47 |
intestinal mucosa | 5.84e-20 | 13 |
wall of intestine | 5.84e-20 | 13 |
gastrointestinal system mucosa | 5.84e-20 | 13 |
small intestine | 6.18e-17 | 4 |
organ component layer | 8.20e-16 | 24 |
ileal mucosa | 1.36e-13 | 3 |
ileum | 1.36e-13 | 3 |
mucosa of small intestine | 1.36e-13 | 3 |
wall of small intestine | 1.36e-13 | 3 |
digestive system | 1.30e-09 | 116 |
digestive tract | 1.30e-09 | 116 |
primitive gut | 1.30e-09 | 116 |
endoderm-derived structure | 2.15e-09 | 118 |
endoderm | 2.15e-09 | 118 |
presumptive endoderm | 2.15e-09 | 118 |
colon | 6.82e-09 | 2 |
large intestine | 6.82e-09 | 2 |
gut-associated lymphoid tissue | 1.41e-08 | 2 |
mucosa-associated lymphoid tissue | 1.41e-08 | 2 |
lymphoid tissue | 1.41e-08 | 2 |
epithelium of mucosa | 1.40e-07 | 9 |
gastrointestinal system epithelium | 1.40e-07 | 9 |
intestinal epithelium | 1.40e-07 | 9 |
subdivision of digestive tract | 1.60e-07 | 114 |