FFCP PHASE2:Hg19::chr6:138192259..138192268,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7128 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:11896 |TSSclassifier=strong...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=11896 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5H7A9,F5GYN2,F5H1G3 | ||
|association_with_transcript=-79bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | |association_with_transcript=-79bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | ||
|cluster_id=chr6:138192259..138192268,+ | |cluster_id=chr6:138192259..138192268,+ |
Latest revision as of 03:26, 25 September 2015
Short description: | p18@TNFAIP3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TNFAIP3_5end |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | -79bp_to_ENST00000535332, ENST00000535574, ENST00000539356_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | F5H7A9F5GYN2F5H1G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p18@TNFAIP3 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.57e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.57e-38 | 42 |
defensive cell | 8.82e-33 | 48 |
phagocyte | 8.82e-33 | 48 |
myeloid leukocyte | 1.39e-28 | 72 |
monopoietic cell | 1.68e-25 | 59 |
monocyte | 1.68e-25 | 59 |
monoblast | 1.68e-25 | 59 |
promonocyte | 1.68e-25 | 59 |
myeloid lineage restricted progenitor cell | 2.52e-25 | 66 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.45e-22 | 98 |
blood island | 1.45e-22 | 98 |
bone marrow | 1.55e-21 | 76 |
hemolymphoid system | 4.38e-20 | 108 |
bone element | 1.06e-19 | 82 |
skeletal element | 1.24e-17 | 90 |
immune system | 6.00e-17 | 93 |
skeletal system | 1.65e-15 | 100 |
lateral plate mesoderm | 6.94e-11 | 203 |
musculoskeletal system | 6.70e-09 | 167 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.84e-07 | 1 |
cutaneous T cell lymphoma | 2.84e-07 | 1 |
mycosis fungoides | 2.84e-07 | 1 |
Showing 1 to 3 of 3 entries