FFCP PHASE2:Hg19::chr7:2559399..2559416,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3955 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6560 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6560 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8NES3 | ||
|association_with_transcript=-59bp_to_ENST00000222725_5end | |association_with_transcript=-59bp_to_ENST00000222725_5end | ||
|cluster_id=chr7:2559399..2559416,+ | |cluster_id=chr7:2559399..2559416,+ |
Latest revision as of 22:17, 17 September 2015
Short description: | p1@LFNG |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LFNG_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -59bp_to_ENST00000222725_5end |
EntrezGene: | LFNG |
HGNC: | 6560 |
UniProt: | Q8NES3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@LFNG |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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leukocyte | 2.95e-32 | 136 |
myeloid leukocyte | 2.25e-30 | 72 |
defensive cell | 1.07e-28 | 48 |
phagocyte | 1.07e-28 | 48 |
nongranular leukocyte | 4.13e-27 | 115 |
classical monocyte | 5.24e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-27 | 42 |
hematopoietic lineage restricted progenitor cell | 1.55e-25 | 120 |
granulocyte monocyte progenitor cell | 4.71e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.93e-24 | 66 |
Showing 1 to 10 of 28 entries
Ontology term | p-value | n |
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hematopoietic system | 8.94e-27 | 98 |
blood island | 8.94e-27 | 98 |
hemolymphoid system | 1.09e-24 | 108 |
bone marrow | 3.10e-21 | 76 |
bone element | 3.64e-19 | 82 |
immune system | 5.16e-19 | 93 |
skeletal element | 5.03e-16 | 90 |
skeletal system | 3.77e-12 | 100 |
blood | 5.69e-07 | 15 |
haemolymphatic fluid | 5.69e-07 | 15 |
Showing 1 to 10 of 11 entries