FFCP PHASE1:Mm9::chr5:91570078..91570084,+: Difference between revisions
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|id=chr5:91570078..91570084,+
|short_description=p@chr5:91570078..91570084,+
|description=CAGE_peak_at_chr5:91570078..91570084,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:91570078..91570084,+ | |||
|description=CAGE_peak_at_chr5:91570078..91570084,+ | |||
|id=chr5:91570078..91570084,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.15e-12!6;CL:0000677!1.15e-12!6;CL:0000212!1.15e-12!6;CL:0000584!1.15e-12!6;CL:0002076!1.28e-12!15;CL:0000066!1.92e-11!25;CL:0002563!8.02e-11!9;CL:0002251!8.02e-11!9;CL:0000075!1.03e-10!7;CL:0000223!7.62e-09!20;CL:0000068!1.85e-07!3;CL:0002202!1.85e-07!3;CL:0000069!1.85e-07!3;CL:0002632!1.85e-07!3;CL:0002368!1.85e-07!3;CL:0000307!1.85e-07!3;CL:0000377!1.85e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.57e-40,6;CL:0000677,3.57e-40,6;CL:0000584,3.57e-40,6;CL:0002076,2.91e-36,15;CL:0000075,1.98e-34,7;CL:0000223,4.95e-27,20;CL:0002563,9.20e-27,9;CL:0002251,9.20e-27,9;CL:0000066,2.16e-26,25;CL:0000068,4.98e-22,3;CL:0002202,4.98e-22,3;CL:0000069,4.98e-22,3;CL:0002632,4.98e-22,3;CL:0002368,4.98e-22,3;CL:0000307,4.98e-22,3;CL:0000377,4.98e-22,3;CL:0002321,4.16e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.96e-20!15;UBERON:0001242!1.26e-16!13;UBERON:0000060!1.26e-16!13;UBERON:0001262!1.26e-16!13;UBERON:0004786!1.26e-16!13;UBERON:0005409!1.66e-12!59;UBERON:0000160!1.46e-11!43;UBERON:0004923!2.26e-11!24;UBERON:0003350!8.02e-11!9;UBERON:0004808!8.02e-11!9;UBERON:0001277!8.02e-11!9;UBERON:0001007!6.31e-10!128;UBERON:0001555!6.31e-10!128;UBERON:0007026!6.31e-10!128;UBERON:0004119!1.22e-09!130;UBERON:0000925!1.22e-09!130;UBERON:0006595!1.22e-09!130;UBERON:0000485!1.32e-08!11;UBERON:0004921!2.12e-08!126;UBERON:0004185!2.12e-08!126;UBERON:0003126!1.85e-07!3;UBERON:0001005!1.85e-07!3;UBERON:0007196!1.85e-07!3;UBERON:0001558!1.85e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.85e-28,15;UBERON:0003350,9.20e-27,9;UBERON:0004808,9.20e-27,9;UBERON:0001277,9.20e-27,9;UBERON:0003126,4.98e-22,3;UBERON:0001005,4.98e-22,3;UBERON:0007196,4.98e-22,3;UBERON:0001558,4.98e-22,3;UBERON:0000485,7.10e-22,11;UBERON:0001242,1.74e-18,13;UBERON:0001262,1.74e-18,13;UBERON:0004786,1.74e-18,13;UBERON:0004923,2.23e-17,24;UBERON:0001962,1.68e-14,2;UBERON:0001961,1.68e-14,2;UBERON:0001744,1.68e-14,2;UBERON:0000160,3.81e-10,31;UBERON:0002465,5.56e-10,3;UBERON:0003199,2.98e-08,1;UBERON:0001007,2.63e-07,116;UBERON:0001555,2.63e-07,116;UBERON:0007026,2.63e-07,116;UBERON:0004119,3.69e-07,118;UBERON:0000925,3.69e-07,118;UBERON:0006595,3.69e-07,118 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,3.0246421130683,1.50268718983904,1.17515490338323,1.40167584357315,0,0.84473233291,0.70219357896598,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,1.14846392823004,0.86152399231815,0.646413698057667,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8347205679756,16.9751109868316,22.7486000256652,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0.823494773620054,0.251335208800269,0.397912944082302,0.38992817423824,0,1.08069024937347,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.509935289981566,0,0.276399947608848,0,0,0,0,0,0.218362563746178,0.674321731924103,0.165306911450672,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,1.36499771816861,3.0246421130683,1.50268718983904,1.17515490338323,1.40167584357315,0,0.84473233291,0.70219357896598,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,1.14846392823004,0.86152399231815,0.646413698057667,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8347205679756,16.9751109868316,22.7486000256652,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0.823494773620054,0.251335208800269,0.397912944082302,0.38992817423824,0,1.08069024937347,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.509935289981566,0,0.276399947608848,0,0,0,0,0,0.218362563746178,0.674321731924103,0.165306911450672,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:91570078..91570084,+ | |||
}} | }} |
Latest revision as of 18:57, 4 August 2015
Short description: | p@chr5:91570078..91570084, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:91570078..91570084, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.57e-40 | 6 |
gut absorptive cell | 3.57e-40 | 6 |
enterocyte | 3.57e-40 | 6 |
endo-epithelial cell | 2.91e-36 | 15 |
columnar/cuboidal epithelial cell | 1.98e-34 | 7 |
endodermal cell | 4.95e-27 | 20 |
intestinal epithelial cell | 9.20e-27 | 9 |
epithelial cell of alimentary canal | 9.20e-27 | 9 |
epithelial cell | 2.16e-26 | 25 |
duct epithelial cell | 4.98e-22 | 3 |
epithelial cell of tracheobronchial tree | 4.98e-22 | 3 |
branched duct epithelial cell | 4.98e-22 | 3 |
epithelial cell of lower respiratory tract | 4.98e-22 | 3 |
respiratory epithelial cell | 4.98e-22 | 3 |
tracheal epithelial cell | 4.98e-22 | 3 |
tracheoblast | 4.98e-22 | 3 |
embryonic cell | 4.16e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.85e-28 | 15 |
epithelium of mucosa | 9.20e-27 | 9 |
gastrointestinal system epithelium | 9.20e-27 | 9 |
intestinal epithelium | 9.20e-27 | 9 |
trachea | 4.98e-22 | 3 |
respiratory airway | 4.98e-22 | 3 |
tracheobronchial tree | 4.98e-22 | 3 |
lower respiratory tract | 4.98e-22 | 3 |
simple columnar epithelium | 7.10e-22 | 11 |
intestinal mucosa | 1.74e-18 | 13 |
wall of intestine | 1.74e-18 | 13 |
gastrointestinal system mucosa | 1.74e-18 | 13 |
organ component layer | 2.23e-17 | 24 |
gut-associated lymphoid tissue | 1.68e-14 | 2 |
mucosa-associated lymphoid tissue | 1.68e-14 | 2 |
lymphoid tissue | 1.68e-14 | 2 |
intestine | 3.81e-10 | 31 |
lymphoid system | 5.56e-10 | 3 |
egg chamber | 2.98e-08 | 1 |
digestive system | 2.63e-07 | 116 |
digestive tract | 2.63e-07 | 116 |
primitive gut | 2.63e-07 | 116 |
endoderm-derived structure | 3.69e-07 | 118 |
endoderm | 3.69e-07 | 118 |
presumptive endoderm | 3.69e-07 | 118 |