FFCP PHASE1:Mm9::chr6:34938438..34938455,-: Difference between revisions
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|id=chr6:34938438..34938455,-
|short_description=p@chr6:34938438..34938455,-
|description=CAGE_peak_at_chr6:34938438..34938455,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:34938438..34938455,- | |||
|description=CAGE_peak_at_chr6:34938438..34938455,- | |||
|id=chr6:34938438..34938455,- | |||
|ontology_enrichment_celltype=CL:0002563!8.27e-10!9;CL:0002251!8.27e-10!9;CL:0002076!8.00e-09!15;CL:0000239!3.40e-07!6;CL:0000677!3.40e-07!6;CL:0000212!3.40e-07!6;CL:0000584!3.40e-07!6;CL:0000066!5.52e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.76e-20,9;CL:0002251,8.76e-20,9;CL:0002076,2.44e-19,15;CL:0000066,1.11e-17,25;CL:0000239,5.10e-14,6;CL:0000677,5.10e-14,6;CL:0000584,5.10e-14,6;CL:0000223,7.61e-14,20;CL:0000075,6.58e-12,7;CL:0000682,1.69e-08,3;CL:0002250,2.44e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.19e-20!59;UBERON:0000160!8.54e-19!43;UBERON:0004119!3.96e-16!130;UBERON:0000925!3.96e-16!130;UBERON:0006595!3.96e-16!130;UBERON:0001007!7.03e-16!128;UBERON:0001555!7.03e-16!128;UBERON:0007026!7.03e-16!128;UBERON:0000344!1.03e-15!15;UBERON:0004921!1.64e-14!126;UBERON:0004185!1.64e-14!126;UBERON:0001242!7.79e-14!13;UBERON:0000060!7.79e-14!13;UBERON:0001262!7.79e-14!13;UBERON:0004786!7.79e-14!13;UBERON:0004923!7.64e-10!24;UBERON:0003350!8.27e-10!9;UBERON:0004808!8.27e-10!9;UBERON:0001277!8.27e-10!9;UBERON:0000485!1.74e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.11e-46,31;UBERON:0000344,6.91e-33,15;UBERON:0001242,1.04e-28,13;UBERON:0001262,1.04e-28,13;UBERON:0004786,1.04e-28,13;UBERON:0005409,1.82e-28,47;UBERON:0003350,8.76e-20,9;UBERON:0004808,8.76e-20,9;UBERON:0001277,8.76e-20,9;UBERON:0004923,3.57e-19,24;UBERON:0000485,7.25e-16,11;UBERON:0001007,1.06e-13,116;UBERON:0001555,1.06e-13,116;UBERON:0007026,1.06e-13,116;UBERON:0004119,2.40e-13,118;UBERON:0000925,2.40e-13,118;UBERON:0006595,2.40e-13,118;UBERON:0004921,9.44e-12,114;UBERON:0002108,4.73e-10,4;UBERON:0000331,5.94e-08,3;UBERON:0002116,5.94e-08,3;UBERON:0001204,5.94e-08,3;UBERON:0001168,5.94e-08,3 | |||
|phase1_expression=0,97.3641387313817,147.41975356221,12.40103266358,15.5277676283368,3.52546471014969,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,14.2393256286132,13.7645568640302,109.678305145969,43.5069616120666,67.6579670633692,21.852693237483,25.2030129759931,38.3593783433677,0,0,0,6.35473563452804,5.15327400611326,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,3.0331466700887,5.82337786567206,0,0.148442139064825,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,3.72783522436244,0,0,55.6896380354729,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,1.0108910337347,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.544291993210623,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,0,0,345.287628218069,46.5432997327838,0,0.232236671860439,0.77320476793256,0.201683524623343,1.11189021922435,0.190225626112559,56.4689583237969,2.79988223030818,2.5133520880027,3.78017296878187,5.8489226135736,52.1315257019448,49.2794753714303,51.7767310461355,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.16488625294148,0.161464426695906,0,0,0,24.7758711135373,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.41326727862668,0.523511883968059,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.443068581523732,0.504832249740738,0.457240839929999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0,0.167884616364078,0.772758376128762,0,2.38097111547445,2.35805216986972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.256100609619477,0,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,97.3641387313817,147.41975356221,12.40103266358,15.5277676283368,3.52546471014969,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,14.2393256286132,13.7645568640302,109.678305145969,43.5069616120666,67.6579670633692,21.852693237483,25.2030129759931,38.3593783433677,0,0,0,6.35473563452804,5.15327400611326,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,3.0331466700887,5.82337786567206,0,0.148442139064825,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,3.72783522436244,0,0,55.6896380354729,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,1.0108910337347,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.544291993210623,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,0,0,345.287628218069,46.5432997327838,0,0.232236671860439,0.77320476793256,0.201683524623343,1.11189021922435,0.190225626112559,56.4689583237969,2.79988223030818,2.5133520880027,3.78017296878187,5.8489226135736,52.1315257019448,49.2794753714303,51.7767310461355,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.16488625294148,0.161464426695906,0,0,0,24.7758711135373,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.41326727862668,0.523511883968059,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.443068581523732,0.504832249740738,0.457240839929999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0,0.167884616364078,0.772758376128762,0,2.38097111547445,2.35805216986972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.256100609619477,0,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr6:34938438..34938455,- | |||
}} | }} |
Latest revision as of 15:01, 5 August 2015
Short description: | p@chr6:34938438..34938455, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:34938438..34938455, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.76e-20 | 9 |
epithelial cell of alimentary canal | 8.76e-20 | 9 |
endo-epithelial cell | 2.44e-19 | 15 |
epithelial cell | 1.11e-17 | 25 |
brush border epithelial cell | 5.10e-14 | 6 |
gut absorptive cell | 5.10e-14 | 6 |
enterocyte | 5.10e-14 | 6 |
endodermal cell | 7.61e-14 | 20 |
columnar/cuboidal epithelial cell | 6.58e-12 | 7 |
M cell of gut | 1.69e-08 | 3 |
intestinal crypt stem cell | 2.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.11e-46 | 31 |
mucosa | 6.91e-33 | 15 |
intestinal mucosa | 1.04e-28 | 13 |
wall of intestine | 1.04e-28 | 13 |
gastrointestinal system mucosa | 1.04e-28 | 13 |
gastrointestinal system | 1.82e-28 | 47 |
epithelium of mucosa | 8.76e-20 | 9 |
gastrointestinal system epithelium | 8.76e-20 | 9 |
intestinal epithelium | 8.76e-20 | 9 |
organ component layer | 3.57e-19 | 24 |
simple columnar epithelium | 7.25e-16 | 11 |
digestive system | 1.06e-13 | 116 |
digestive tract | 1.06e-13 | 116 |
primitive gut | 1.06e-13 | 116 |
endoderm-derived structure | 2.40e-13 | 118 |
endoderm | 2.40e-13 | 118 |
presumptive endoderm | 2.40e-13 | 118 |
subdivision of digestive tract | 9.44e-12 | 114 |
small intestine | 4.73e-10 | 4 |
ileal mucosa | 5.94e-08 | 3 |
ileum | 5.94e-08 | 3 |
mucosa of small intestine | 5.94e-08 | 3 |
wall of small intestine | 5.94e-08 | 3 |