FFCP PHASE1:Mm9::chr7:30032654..30032689,+: Difference between revisions
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|id=chr7:30032654..30032689,+
|short_description=p@chr7:30032654..30032689,+
|description=CAGE_peak_at_chr7:30032654..30032689,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3125 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:30032654..30032689,+ | |||
|description=CAGE_peak_at_chr7:30032654..30032689,+ | |||
|id=chr7:30032654..30032689,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.81e-08!25;CL:0002563!7.80e-08!9;CL:0002251!7.80e-08!9;CL:0002076!2.37e-07!15;CL:0000223!2.62e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.85e-17,15;CL:0002563,3.11e-16,9;CL:0002251,3.11e-16,9;CL:0000066,5.94e-15,25;CL:0000223,2.99e-12,20;CL:0000239,6.44e-12,6;CL:0000677,6.44e-12,6;CL:0000584,6.44e-12,6;CL:0000075,4.21e-10,7;CL:0000068,1.23e-07,3;CL:0002202,1.23e-07,3;CL:0000069,1.23e-07,3;CL:0002632,1.23e-07,3;CL:0002368,1.23e-07,3;CL:0000307,1.23e-07,3;CL:0000377,1.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.26e-14!43;UBERON:0005409!9.14e-14!59;UBERON:0000344!1.31e-12!15;UBERON:0001242!5.14e-11!13;UBERON:0000060!5.14e-11!13;UBERON:0001262!5.14e-11!13;UBERON:0004786!5.14e-11!13;UBERON:0004119!1.01e-10!130;UBERON:0000925!1.01e-10!130;UBERON:0006595!1.01e-10!130;UBERON:0001007!4.24e-10!128;UBERON:0001555!4.24e-10!128;UBERON:0007026!4.24e-10!128;UBERON:0004921!4.12e-09!126;UBERON:0004185!4.12e-09!126;UBERON:0004923!2.31e-08!24;UBERON:0003350!7.80e-08!9;UBERON:0004808!7.80e-08!9;UBERON:0001277!7.80e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.21e-37,31;UBERON:0005409,1.45e-30,47;UBERON:0000344,2.02e-27,15;UBERON:0001242,1.12e-23,13;UBERON:0001262,1.12e-23,13;UBERON:0004786,1.12e-23,13;UBERON:0003350,3.11e-16,9;UBERON:0004808,3.11e-16,9;UBERON:0001277,3.11e-16,9;UBERON:0004923,1.02e-15,24;UBERON:0001007,3.76e-14,116;UBERON:0001555,3.76e-14,116;UBERON:0007026,3.76e-14,116;UBERON:0004119,9.08e-14,118;UBERON:0000925,9.08e-14,118;UBERON:0006595,9.08e-14,118;UBERON:0000485,5.84e-13,11;UBERON:0004921,2.84e-12,114;UBERON:0002108,4.87e-09,4;UBERON:0003126,1.23e-07,3;UBERON:0001005,1.23e-07,3;UBERON:0007196,1.23e-07,3;UBERON:0001558,1.23e-07,3;UBERON:0000331,4.27e-07,3;UBERON:0002116,4.27e-07,3;UBERON:0001204,4.27e-07,3;UBERON:0001168,4.27e-07,3 | |||
|phase1_expression=0,10.4692622291808,9.55498402718026,5.44435580352294,10.5188103288733,2.18243053485457,3.50418960893289,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,7.99962113967033,10.3234176480227,4.59385571292016,5.1691439539089,7.54149314400612,23.372880593134,6.30075324399827,5.54326276638262,0,0,0,1.73310971850765,1.32987716286794,2.04169356262369,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.55994568650145,0,0,0,0,1.02903774414379,0.85960031981627,2.57836046138721,0,0,0,2.03306719241479,3.55717918444456,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.377857800533928,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,17.7522653629196,10.6411143499541,17.1878311305026,1.59857431606684,0,0,0,0.304465478312141,0,0,0.23517741427141,0.376999773989026,0.741584903203122,0,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0.492502392237286,0,0,0,0,0,0,9.91256348951394,7.1401652999157,0.213288250535234,0.464473343720877,0.515469845288373,0.201683524623343,0.889512175379481,2.09248188723815,18.0321043386914,19.2697777027093,13.3207660664143,6.16765063327568,9.16331209459865,6.29173586057955,16.4264917904768,15.3338780405863,0,0.114248512609729,0,0,0,0,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0,0,0.274561413188081,0,0,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,1.17080188714679,0,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,1.03135543248187,0,0,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0.63549621259146,0,0,0,0.241251699712623,0.358117032009409,0.164140899745061,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.86404272657441,0.418176592028937,1.09181281873089,1.21377911746339,0.909188012978695,1.30877970992015,26.9599144446929,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0.665957860122194,0.897138566094757,1.34307693091263,0,0.187682475451182,0,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0,0.287177344778066,0,0.347652977834566,0,0,0,0,0,0.715308569841963,0,0,0.423073039458382,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,10.4692622291808,9.55498402718026,5.44435580352294,10.5188103288733,2.18243053485457,3.50418960893289,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,7.99962113967033,10.3234176480227,4.59385571292016,5.1691439539089,7.54149314400612,23.372880593134,6.30075324399827,5.54326276638262,0,0,0,1.73310971850765,1.32987716286794,2.04169356262369,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.55994568650145,0,0,0,0,1.02903774414379,0.85960031981627,2.57836046138721,0,0,0,2.03306719241479,3.55717918444456,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.377857800533928,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,17.7522653629196,10.6411143499541,17.1878311305026,1.59857431606684,0,0,0,0.304465478312141,0,0,0.23517741427141,0.376999773989026,0.741584903203122,0,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0.492502392237286,0,0,0,0,0,0,9.91256348951394,7.1401652999157,0.213288250535234,0.464473343720877,0.515469845288373,0.201683524623343,0.889512175379481,2.09248188723815,18.0321043386914,19.2697777027093,13.3207660664143,6.16765063327568,9.16331209459865,6.29173586057955,16.4264917904768,15.3338780405863,0,0.114248512609729,0,0,0,0,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0,0,0.274561413188081,0,0,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,1.17080188714679,0,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,1.03135543248187,0,0,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0.63549621259146,0,0,0,0.241251699712623,0.358117032009409,0.164140899745061,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.86404272657441,0.418176592028937,1.09181281873089,1.21377911746339,0.909188012978695,1.30877970992015,26.9599144446929,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0.665957860122194,0.897138566094757,1.34307693091263,0,0.187682475451182,0,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0,0.287177344778066,0,0.347652977834566,0,0,0,0,0,0.715308569841963,0,0,0.423073039458382,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p@chr7:30032654..30032689,+ | |||
}} | }} |
Latest revision as of 00:03, 5 August 2015
Short description: | p@chr7:30032654..30032689, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:30032654..30032689, + |
Coexpression cluster: | MCL_coexpression_mm9:3125 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.85e-17 | 15 |
intestinal epithelial cell | 3.11e-16 | 9 |
epithelial cell of alimentary canal | 3.11e-16 | 9 |
epithelial cell | 5.94e-15 | 25 |
endodermal cell | 2.99e-12 | 20 |
brush border epithelial cell | 6.44e-12 | 6 |
gut absorptive cell | 6.44e-12 | 6 |
enterocyte | 6.44e-12 | 6 |
columnar/cuboidal epithelial cell | 4.21e-10 | 7 |
duct epithelial cell | 1.23e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.23e-07 | 3 |
branched duct epithelial cell | 1.23e-07 | 3 |
epithelial cell of lower respiratory tract | 1.23e-07 | 3 |
respiratory epithelial cell | 1.23e-07 | 3 |
tracheal epithelial cell | 1.23e-07 | 3 |
tracheoblast | 1.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.21e-37 | 31 |
gastrointestinal system | 1.45e-30 | 47 |
mucosa | 2.02e-27 | 15 |
intestinal mucosa | 1.12e-23 | 13 |
wall of intestine | 1.12e-23 | 13 |
gastrointestinal system mucosa | 1.12e-23 | 13 |
epithelium of mucosa | 3.11e-16 | 9 |
gastrointestinal system epithelium | 3.11e-16 | 9 |
intestinal epithelium | 3.11e-16 | 9 |
organ component layer | 1.02e-15 | 24 |
digestive system | 3.76e-14 | 116 |
digestive tract | 3.76e-14 | 116 |
primitive gut | 3.76e-14 | 116 |
endoderm-derived structure | 9.08e-14 | 118 |
endoderm | 9.08e-14 | 118 |
presumptive endoderm | 9.08e-14 | 118 |
simple columnar epithelium | 5.84e-13 | 11 |
subdivision of digestive tract | 2.84e-12 | 114 |
small intestine | 4.87e-09 | 4 |
trachea | 1.23e-07 | 3 |
respiratory airway | 1.23e-07 | 3 |
tracheobronchial tree | 1.23e-07 | 3 |
lower respiratory tract | 1.23e-07 | 3 |
ileal mucosa | 4.27e-07 | 3 |
ileum | 4.27e-07 | 3 |
mucosa of small intestine | 4.27e-07 | 3 |
wall of small intestine | 4.27e-07 | 3 |