FFCP PHASE1:Mm9::chr8:125717914..125717925,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:125717914..125717925,+
|short_description=p5@Dpep1
|description=CAGE_peak_5_at_Dpep1_5end
|association_with_transcript=63bp_to_uc009nuj.2_5end
|EntrezGene...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13479 | |EntrezGene=13479 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_uc009nuj.2_5end | |||
|cluster_id=chr8:125717914..125717925,+ | |||
|description=CAGE_peak_5_at_Dpep1_5end | |||
|id=chr8:125717914..125717925,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.74e-12!6;CL:0000677!9.74e-12!6;CL:0000212!9.74e-12!6;CL:0000584!9.74e-12!6;CL:0000075!6.29e-10!7;CL:0002563!1.62e-07!9;CL:0002251!1.62e-07!9;CL:0000473!3.67e-07!3;CL:0000627!3.67e-07!3;CL:0000682!3.67e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.26e-13,6;CL:0000677,6.26e-13,6;CL:0000584,6.26e-13,6;CL:0000075,4.85e-11,7;CL:0000682,1.70e-10,3;CL:0002563,1.62e-08,9;CL:0002251,1.62e-08,9;CL:0000066,6.00e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.37e-22!43;UBERON:0000344!1.86e-17!15;UBERON:0005409!3.76e-17!59;UBERON:0001242!3.79e-14!13;UBERON:0000060!3.79e-14!13;UBERON:0001262!3.79e-14!13;UBERON:0004786!3.79e-14!13;UBERON:0004923!9.52e-10!24;UBERON:0003350!1.62e-07!9;UBERON:0004808!1.62e-07!9;UBERON:0001277!1.62e-07!9;UBERON:0000331!3.20e-07!3;UBERON:0002116!3.20e-07!3;UBERON:0001204!3.20e-07!3;UBERON:0001168!3.20e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.08e-29,31;UBERON:0000344,1.45e-23,15;UBERON:0005409,7.61e-20,47;UBERON:0001242,1.87e-18,13;UBERON:0001262,1.87e-18,13;UBERON:0004786,1.87e-18,13;UBERON:0004923,6.60e-14,24;UBERON:0002108,2.54e-13,4;UBERON:0000331,1.37e-10,3;UBERON:0002116,1.37e-10,3;UBERON:0001204,1.37e-10,3;UBERON:0001168,1.37e-10,3;UBERON:0003350,1.62e-08,9;UBERON:0004808,1.62e-08,9;UBERON:0001277,1.62e-08,9;UBERON:0001007,1.98e-07,116;UBERON:0001555,1.98e-07,116;UBERON:0007026,1.98e-07,116;UBERON:0004119,3.14e-07,118;UBERON:0000925,3.14e-07,118;UBERON:0006595,3.14e-07,118;UBERON:0001962,4.47e-07,2;UBERON:0001961,4.47e-07,2;UBERON:0001744,4.47e-07,2;UBERON:0001155,5.50e-07,2;UBERON:0000059,5.50e-07,2;UBERON:0000485,6.59e-07,11 | |||
|phase1_expression=0,12.9120900826564,16.8349718574128,12.40103266358,9.5170188689806,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,8.79958325363737,10.3234176480227,13.7815671387605,13.3536218809313,11.635446565038,64.6079626151671,28.7314347926321,9.5344119581781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0,13.0283098156382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,9.91256348951394,8.19796756656987,0,0,0,0.403367049246685,0.22237804384487,0.951128130562796,9.96511029243474,1.15289268306808,0.502670417600539,0.397912944082302,0,8.08937467788799,14.0489732418551,9.16049856970089,0,0,0,0,0.581857461502877,0.701358198903186,1.58091342810643,1.32849133181642,2.82597710114475,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.61886760878507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,12.9120900826564,16.8349718574128,12.40103266358,9.5170188689806,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,8.79958325363737,10.3234176480227,13.7815671387605,13.3536218809313,11.635446565038,64.6079626151671,28.7314347926321,9.5344119581781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0,13.0283098156382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,9.91256348951394,8.19796756656987,0,0,0,0.403367049246685,0.22237804384487,0.951128130562796,9.96511029243474,1.15289268306808,0.502670417600539,0.397912944082302,0,8.08937467788799,14.0489732418551,9.16049856970089,0,0,0,0,0.581857461502877,0.701358198903186,1.58091342810643,1.32849133181642,2.82597710114475,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.61886760878507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p5@Dpep1 | |||
}} | }} |
Latest revision as of 16:41, 1 October 2015
Short description: | p5@Dpep1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dpep1_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 63bp_to_uc009nuj.2_5end |
EntrezGene: | Dpep1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.26e-13 | 6 |
gut absorptive cell | 6.26e-13 | 6 |
enterocyte | 6.26e-13 | 6 |
columnar/cuboidal epithelial cell | 4.85e-11 | 7 |
M cell of gut | 1.70e-10 | 3 |
intestinal epithelial cell | 1.62e-08 | 9 |
epithelial cell of alimentary canal | 1.62e-08 | 9 |
epithelial cell | 6.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.08e-29 | 31 |
mucosa | 1.45e-23 | 15 |
gastrointestinal system | 7.61e-20 | 47 |
intestinal mucosa | 1.87e-18 | 13 |
wall of intestine | 1.87e-18 | 13 |
gastrointestinal system mucosa | 1.87e-18 | 13 |
organ component layer | 6.60e-14 | 24 |
small intestine | 2.54e-13 | 4 |
ileal mucosa | 1.37e-10 | 3 |
ileum | 1.37e-10 | 3 |
mucosa of small intestine | 1.37e-10 | 3 |
wall of small intestine | 1.37e-10 | 3 |
epithelium of mucosa | 1.62e-08 | 9 |
gastrointestinal system epithelium | 1.62e-08 | 9 |
intestinal epithelium | 1.62e-08 | 9 |
digestive system | 1.98e-07 | 116 |
digestive tract | 1.98e-07 | 116 |
primitive gut | 1.98e-07 | 116 |
endoderm-derived structure | 3.14e-07 | 118 |
endoderm | 3.14e-07 | 118 |
presumptive endoderm | 3.14e-07 | 118 |
gut-associated lymphoid tissue | 4.47e-07 | 2 |
mucosa-associated lymphoid tissue | 4.47e-07 | 2 |
lymphoid tissue | 4.47e-07 | 2 |
colon | 5.50e-07 | 2 |
large intestine | 5.50e-07 | 2 |
simple columnar epithelium | 6.59e-07 | 11 |