FFCP PHASE1:Mm9::chr8:91159958..91160015,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:91159958..91160015,-
|short_description=p1@Snx20
|description=CAGE_peak_1_at_Snx20_5end
|association_with_transcript=11bp_to_ENSMUST00000034087,NM_027840,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71607 | |EntrezGene=71607 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=452 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D2Y5 | |UniProt=Q9D2Y5 | ||
|association_with_transcript=11bp_to_ENSMUST00000034087,NM_027840,uc009mrp.1_5end | |||
|cluster_id=chr8:91159958..91160015,- | |||
|description=CAGE_peak_1_at_Snx20_5end | |||
|id=chr8:91159958..91160015,- | |||
|ontology_enrichment_celltype=CL:0000988!8.45e-08!32;CL:0002032!8.45e-08!32;CL:0000037!8.45e-08!32;CL:0000566!8.45e-08!32;CL:0000837!8.45e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.07e-08,32;CL:0002032,1.07e-08,32;CL:0000037,1.07e-08,32;CL:0000837,1.07e-08,32;CL:0002031,7.86e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.81e-14!48;UBERON:0001007!1.71e-12!128;UBERON:0001555!1.71e-12!128;UBERON:0007026!1.71e-12!128;UBERON:0002390!2.16e-12!45;UBERON:0003061!2.16e-12!45;UBERON:0004119!4.69e-12!130;UBERON:0000925!4.69e-12!130;UBERON:0006595!4.69e-12!130;UBERON:0004921!1.39e-11!126;UBERON:0004185!1.39e-11!126;UBERON:0002405!2.29e-11!70;UBERON:0005409!6.52e-10!59;UBERON:0004923!7.46e-10!24;UBERON:0000160!7.58e-10!43;UBERON:0000344!8.73e-09!15;UBERON:0002371!2.27e-08!16;UBERON:0001242!1.12e-07!13;UBERON:0000060!1.12e-07!13;UBERON:0001262!1.12e-07!13;UBERON:0004786!1.12e-07!13;UBERON:0001474!4.80e-07!22;UBERON:0004765!4.80e-07!22;UBERON:0001434!4.80e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.59e-15,48;UBERON:0002405,2.59e-15,48;UBERON:0002390,1.47e-13,45;UBERON:0003061,1.47e-13,45;UBERON:0001007,1.11e-12,116;UBERON:0001555,1.11e-12,116;UBERON:0007026,1.11e-12,116;UBERON:0004119,4.46e-12,118;UBERON:0000925,4.46e-12,118;UBERON:0006595,4.46e-12,118;UBERON:0004921,9.78e-12,114;UBERON:0000160,2.45e-11,31;UBERON:0005409,1.56e-10,47;UBERON:0004923,5.33e-10,24;UBERON:0000344,4.26e-09,15;UBERON:0002371,1.15e-08,16;UBERON:0001242,6.07e-08,13;UBERON:0001262,6.07e-08,13;UBERON:0004786,6.07e-08,13;UBERON:0001474,1.19e-07,22;UBERON:0004765,1.19e-07,22;UBERON:0001434,1.19e-07,22 | |||
|phase1_expression=0.160148847104794,84.103073241086,117.3898037625,84.6899791659124,94.6692929598596,40.7946630745892,43.2183385101723,51.7784527000721,17.0354353803517,3.97909694747389,14.5535272991679,7.0199499915896,40.0609708039021,33.569434528895,12.9912807108108,11.9460407759997,4.19737126876888,60.8841979141399,58.5478631496505,72.1462408056651,2.29616883407888,5.06383851124515,1.30599894569468,52.4775146762374,60.7934594828001,101.064825684244,138.705362763222,85.1111369109262,30.0237002741071,33.5200072580708,55.4326276638262,0,0,0,15.5979874665688,9.47537478543406,13.4751775133164,107.562629099385,83.6028818640467,101.563606330917,179.410603849459,142.756506356315,122.834119316882,0.755380907853464,1.01376931219515,4.22157529971868,3.9119567217402,0,0,0.194429899074283,0.139986421625363,0,59.2272599383809,46.423177088726,28.231879127967,1.54355661621568,0.573066879877513,0,0,0,0.633831403506179,12.876092218627,3.55717918444456,88.1901722935771,121.630562595738,101.598656437292,26.9640099466564,18.4424786554346,0.414758449233911,0.675029691658453,0.210324961351382,0.285650984403804,0.883474163806454,0.367472397644862,0.383381884072945,0,2.20231761998777,1.65993539510744,2.4577045320999,0.131886287730194,0,0,1.11673199600552,1.68828783009504,1.5279824777681,0.589257170947335,0.427115042397309,0.372798891650601,1.81742863999642,0,0.869593466105033,3.44169550792555,0,0.539703191637817,0,0.896053774194671,6.60088774619234,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,13.5878816865681,78.9760545123874,3.71105347662062,0.867426633830679,2.13125834818499,1.61430848079241,1.3565037649736,1.41106448562846,0.628332956648377,15.5732829672656,4.916378135277,17.6922110389975,3.88240439873782,13.0296495891632,9.69750506270444,16.775258509631,0.585561594023094,0.83778682725382,26.0566196312763,29.5943357529623,16.7972764678154,28.2095904102204,1.19832511523858,0.915001205637253,0.251308704225729,0.695297280769106,0.255715457330331,1.66230435647648,0.648965052271031,0.916554274652847,12.4406970610093,0.252722758433675,0.841767423545896,0,0.689706313300419,0.180062129805349,0.452114453507145,0.680364991513279,0.384341160854549,0.562210347358373,0.517406741478031,0.431135985865684,0.567318240503458,0.175951124163949,0.43839146485515,0.556094498451196,1.39300866608867,1.4404749548556,0.796137067273973,13.3420505589515,12.3526995415063,16.4814829649444,0.414251545071004,0.234526059981096,1.08037236876609,1.42046841351126,0.196764231747404,0.462801338662135,2.09280550275367,1.60964040839772,1.16765342367169,1.48103864922132,2.62667942526552,1.37816976227955,1.60819986167866,4.61055242111206,1.61047702512446,0.841159794256509,0.205809224758569,44.2761169198289,28.2962106329992,1.2797295032114,0.696710015581316,1.9330119198314,3.02525286935014,10.0070119730192,14.4571475845545,13.7613427847908,18.6109818838132,16.5881237808178,16.7123436514567,12.6726656627428,10.7858329038507,15.7780776408527,34.6505815462599,0.569003702859245,0.685491075658373,0,0.814605311381257,0.387904974335251,0.841629838683823,0.885311519739602,0.885660887877613,1.09899109488962,0.493588655687202,1.1858105083486,1.83529616287703,1.57247196090562,2.47348323623339,2.43432145666204,4.82354319504834,7.12952384987975,9.20627639842594,4.70192157647603,5.21666685057355,8.62609239164127,6.69853705803306,4.36852742360385,1.51547326768267,1.61457672169721,1.92977408545347,9.97667226899665,0.568474235311454,1.14075483509418,1.01847051465113,1.64283173801951,2.84760637651087,3.57065461329021,5.07347484430277,5.99013547603526,5.53661724121937,5.10255259703959,8.35702905050264,8.97961905702657,7.81104916340163,84.4431190059925,85.9370980433561,4.42587845717133,3.58717770196152,0.80275294993896,0.820481806145422,0.163934945376675,1.26235463602186,0,1.17131623288992,0,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,2.04579100537918,0.395287777946524,0.642642632843614,3.83238230062325,1.78065603667255,0.977321756121456,3.29940245945071,3.98235415019888,0.728341908464944,0.906970670894253,1.69744571780308,3.54362271456927,3.3817866273832,5.42699415653264,2.90826983582004,4.9909632973861,3.16036757935816,1.05418608574999,3.09406629744561,0,0.36012218806262,0.517434735131018,1.07168517515796,1.24138163549592,1.42695054081656,0.658196082408484,1.8267896946876,0.704015124191131,1.27099242518292,0.882113592219848,2.63818004706368,2.26050197374268,1.02531972377865,1.19372344003136,1.14898629821543,25.0673519501672,0.927126510052548,28.1936953316457,13.002372681683,13.1488114432495,14.1276342753518,19.8206630195487,18.0734756833153,49.1237662682242,46.4638821714545,46.296991224482,2.86401185404534,0.316335993581135,1.21991680276109,0.756037385752609,1.67270636811575,1.31017538247707,1.21377911746339,1.48776220305605,1.57053565190418,15.1649518751398,6.21339313086926,0,0.598066184175915,0.66183396182839,0.583353565032143,1.16243841129958,1.18269287843545,0.821500670520278,0.5208175393758,0.209718688851422,0.483168241652012,0.288030006257865,1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|phase1_expression=0.160148847104794,84.103073241086,117.3898037625,84.6899791659124,94.6692929598596,40.7946630745892,43.2183385101723,51.7784527000721,17.0354353803517,3.97909694747389,14.5535272991679,7.0199499915896,40.0609708039021,33.569434528895,12.9912807108108,11.9460407759997,4.19737126876888,60.8841979141399,58.5478631496505,72.1462408056651,2.29616883407888,5.06383851124515,1.30599894569468,52.4775146762374,60.7934594828001,101.064825684244,138.705362763222,85.1111369109262,30.0237002741071,33.5200072580708,55.4326276638262,0,0,0,15.5979874665688,9.47537478543406,13.4751775133164,107.562629099385,83.6028818640467,101.563606330917,179.410603849459,142.756506356315,122.834119316882,0.755380907853464,1.01376931219515,4.22157529971868,3.9119567217402,0,0,0.194429899074283,0.139986421625363,0,59.2272599383809,46.423177088726,28.231879127967,1.54355661621568,0.573066879877513,0,0,0,0.633831403506179,12.876092218627,3.55717918444456,88.1901722935771,121.630562595738,101.598656437292,26.9640099466564,18.4424786554346,0.414758449233911,0.675029691658453,0.210324961351382,0.285650984403804,0.883474163806454,0.367472397644862,0.383381884072945,0,2.20231761998777,1.65993539510744,2.4577045320999,0.131886287730194,0,0,1.11673199600552,1.68828783009504,1.5279824777681,0.589257170947335,0.427115042397309,0.372798891650601,1.81742863999642,0,0.869593466105033,3.44169550792555,0,0.539703191637817,0,0.896053774194671,6.60088774619234,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,13.5878816865681,78.9760545123874,3.71105347662062,0.867426633830679,2.13125834818499,1.61430848079241,1.3565037649736,1.41106448562846,0.628332956648377,15.5732829672656,4.916378135277,17.6922110389975,3.88240439873782,13.0296495891632,9.69750506270444,16.775258509631,0.585561594023094,0.83778682725382,26.0566196312763,29.5943357529623,16.7972764678154,28.2095904102204,1.19832511523858,0.915001205637253,0.251308704225729,0.695297280769106,0.255715457330331,1.66230435647648,0.648965052271031,0.916554274652847,12.4406970610093,0.252722758433675,0.841767423545896,0,0.689706313300419,0.180062129805349,0.452114453507145,0.680364991513279,0.384341160854549,0.562210347358373,0.517406741478031,0.431135985865684,0.567318240503458,0.175951124163949,0.43839146485515,0.556094498451196,1.39300866608867,1.4404749548556,0.796137067273973,13.3420505589515,12.3526995415063,16.4814829649444,0.414251545071004,0.234526059981096,1.08037236876609,1.42046841351126,0.196764231747404,0.462801338662135,2.09280550275367,1.60964040839772,1.16765342367169,1.48103864922132,2.62667942526552,1.37816976227955,1.60819986167866,4.61055242111206,1.61047702512446,0.841159794256509,0.205809224758569,44.2761169198289,28.2962106329992,1.2797295032114,0.696710015581316,1.9330119198314,3.02525286935014,10.0070119730192,14.4571475845545,13.7613427847908,18.6109818838132,16.5881237808178,16.7123436514567,12.6726656627428,10.7858329038507,15.7780776408527,34.6505815462599,0.569003702859245,0.685491075658373,0,0.814605311381257,0.387904974335251,0.841629838683823,0.885311519739602,0.885660887877613,1.09899109488962,0.493588655687202,1.1858105083486,1.83529616287703,1.57247196090562,2.47348323623339,2.43432145666204,4.82354319504834,7.12952384987975,9.20627639842594,4.70192157647603,5.21666685057355,8.62609239164127,6.69853705803306,4.36852742360385,1.51547326768267,1.61457672169721,1.92977408545347,9.97667226899665,0.568474235311454,1.14075483509418,1.01847051465113,1.64283173801951,2.84760637651087,3.57065461329021,5.07347484430277,5.99013547603526,5.53661724121937,5.10255259703959,8.35702905050264,8.97961905702657,7.81104916340163,84.4431190059925,85.9370980433561,4.42587845717133,3.58717770196152,0.80275294993896,0.820481806145422,0.163934945376675,1.26235463602186,0,1.17131623288992,0,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,2.04579100537918,0.395287777946524,0.642642632843614,3.83238230062325,1.78065603667255,0.977321756121456,3.29940245945071,3.98235415019888,0.728341908464944,0.906970670894253,1.69744571780308,3.54362271456927,3.3817866273832,5.42699415653264,2.90826983582004,4.9909632973861,3.16036757935816,1.05418608574999,3.09406629744561,0,0.36012218806262,0.517434735131018,1.07168517515796,1.24138163549592,1.42695054081656,0.658196082408484,1.8267896946876,0.704015124191131,1.27099242518292,0.882113592219848,2.63818004706368,2.26050197374268,1.02531972377865,1.19372344003136,1.14898629821543,25.0673519501672,0.927126510052548,28.1936953316457,13.002372681683,13.1488114432495,14.1276342753518,19.8206630195487,18.0734756833153,49.1237662682242,46.4638821714545,46.296991224482,2.86401185404534,0.316335993581135,1.21991680276109,0.756037385752609,1.67270636811575,1.31017538247707,1.21377911746339,1.48776220305605,1.57053565190418,15.1649518751398,6.21339313086926,0,0.598066184175915,0.66183396182839,0.583353565032143,1.16243841129958,1.18269287843545,0.821500670520278,0.5208175393758,0.209718688851422,0.483168241652012,0.288030006257865,1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| ||
|short_description=p1@Snx20 | |||
}} | }} |
Latest revision as of 23:20, 25 September 2015
Short description: | p1@Snx20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snx20_5end |
Coexpression cluster: | MCL_coexpression_mm9:452 |
Association with transcript: | 11bp_to_ENSMUST00000034087, NM_027840, uc009mrp.1_5end |
EntrezGene: | Snx20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.07e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.07e-08 | 32 |
hematopoietic stem cell | 1.07e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.07e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 7.86e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.59e-15 | 48 |
immune system | 2.59e-15 | 48 |
hematopoietic system | 1.47e-13 | 45 |
blood island | 1.47e-13 | 45 |
digestive system | 1.11e-12 | 116 |
digestive tract | 1.11e-12 | 116 |
primitive gut | 1.11e-12 | 116 |
endoderm-derived structure | 4.46e-12 | 118 |
endoderm | 4.46e-12 | 118 |
presumptive endoderm | 4.46e-12 | 118 |
subdivision of digestive tract | 9.78e-12 | 114 |
intestine | 2.45e-11 | 31 |
gastrointestinal system | 1.56e-10 | 47 |
organ component layer | 5.33e-10 | 24 |
mucosa | 4.26e-09 | 15 |
bone marrow | 1.15e-08 | 16 |
intestinal mucosa | 6.07e-08 | 13 |
wall of intestine | 6.07e-08 | 13 |
gastrointestinal system mucosa | 6.07e-08 | 13 |
bone element | 1.19e-07 | 22 |
skeletal element | 1.19e-07 | 22 |
skeletal system | 1.19e-07 | 22 |