Personal tools

FFCP PHASE1:Mm9::chr9:113650557..113650601,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr9:113650557..113650601,+ |short_description=p2@Clasp2 |description=CAGE_peak_2_at_Clasp2_5end |association_with_transcript=0bp_to_ENSMUST00000111849,ENSMUST0...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:113650557..113650601,+
|DHSsupport=NA
|short_description=p2@Clasp2
|DPIdataset=NA
|description=CAGE_peak_2_at_Clasp2_5end
|association_with_transcript=0bp_to_ENSMUST00000111849,ENSMUST00000167613,NM_001114347,uc009rwq.1,uc009rwr.2_5end
|EntrezGene=76499
|EntrezGene=76499
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9QQ37,E9QB05,Q8BSE7,Q08EB6
|UniProt=E9QQ37,E9QB05,Q8BSE7,Q08EB6
|association_with_transcript=0bp_to_ENSMUST00000111849,ENSMUST00000167613,NM_001114347,uc009rwq.1,uc009rwr.2_5end
|cluster_id=chr9:113650557..113650601,+
|description=CAGE_peak_2_at_Clasp2_5end
|id=chr9:113650557..113650601,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!2.05e-11!193;UBERON:0004120!2.05e-11!193;UBERON:0006603!2.05e-11!193;UBERON:0001004!1.11e-07!42;UBERON:0000065!1.14e-07!41;UBERON:0003081!1.20e-07!88;UBERON:0004177!1.70e-07!29;UBERON:0002390!2.27e-07!45;UBERON:0003061!2.27e-07!45;UBERON:0001048!2.64e-07!147;UBERON:0005911!4.63e-07!69;UBERON:0002193!4.84e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.14e-10,120;UBERON:0004120,1.14e-10,120;UBERON:0006603,1.14e-10,120;UBERON:0001048,7.80e-08,134;UBERON:0001004,1.11e-07,42;UBERON:0000065,1.14e-07,41;UBERON:0004177,1.70e-07,29;UBERON:0005057,1.70e-07,29;UBERON:0003081,2.09e-07,87;UBERON:0002390,2.27e-07,45;UBERON:0003061,2.27e-07,45;UBERON:0005911,4.63e-07,69;UBERON:0002193,4.84e-07,48;UBERON:0002405,4.84e-07,48
|phase1_expression=12.1713123799643,24.4282785347553,23.6599604482559,33.875991666365,42.0752413154932,21.1527882608981,19.8570744506197,20.5306084272106,20.9775196005983,24.8108397901313,21.5734639964136,21.5384829287408,27.5633175189241,22.1173618120063,32.3116468961193,26.1193094932875,28.682037003254,21.6091583270393,25.9146279514846,19.9463136345074,14.5424026158329,23.9291192394134,21.9407822876706,15.0392877425802,13.9939661450974,15.5042630311055,17.6612418425221,13.574687659211,11.0213583284697,12.8535366177565,11.5299865540758,27.3063189587641,27.6779154413057,0,14.4425809875637,11.9688944658114,16.5377178572519,28.0416192593728,19.533383613095,26.1761871986899,13.5293242247133,24.589637458504,19.9059244742773,11.8343008897043,12.1652317463417,13.0318194034794,6.25913075478431,9.15705656797875,5.27246838562732,12.4435135407541,10.0790223570261,2.87505128729943,29.0263908479884,45.6978149467147,33.9454737133889,18.7799388306241,20.057340795713,14.9544906760458,8.29497489524351,6.34789175126439,6.97214543856797,7.45457970552091,6.22506357277798,11.2487464660175,10.8775299882367,8.5257613793532,5.39280198933128,5.37905627450176,9.02099627083756,6.75029691658453,9.04397333810943,7.9982275633065,7.28866185140325,10.534208732486,7.76348315247715,8.27296907949019,19.82085857989,13.2794831608595,12.595735727012,5.67111037239834,5.39777097254217,6.25096044668112,13.6799669510677,16.3201156909187,12.835052813252,14.142172102736,6.69146899755784,7.26957838718672,20.9004293599588,30.2286240427142,17.971598299504,12.9063581547208,6.11974200336975,4.31762553310254,9.09686984426737,9.40856462904405,10.3928870897496,12.9527045159324,5.45550609666024,9.89350808628953,19.1547050896285,23.0987659345772,5.09610479413291,28.4426681261332,13.4224445426953,11.1478340809043,14.1546844604139,13.4736978068491,22.2686579936568,32.5088284551966,20.8182392119363,25.879565656532,23.522780720118,21.7040602395776,27.9861122982977,20.4836543867371,17.3036477414062,23.1358971071859,33.6152009740952,19.4120219936891,25.1759331044849,21.819386391085,18.6391761218122,10.8328894894272,9.63454851341893,18.13745091981,21.087461913042,16.197373736822,19.4417447421789,15.1288545798871,11.8950156732843,4.39790232395025,11.9938780932671,12.7857728665165,13.5062228963714,11.5191296778108,18.4329248569072,24.5081732101883,11.1198013710817,12.2056276414155,16.6554166992261,13.5642241615749,13.3245976055958,16.8789395976001,21.4995337318196,21.3949912875699,17.615924217229,16.557015727297,16.5987354558289,19.6670323374532,16.0115522989193,10.302199424096,12.7901734643775,16.0195996600197,20.5782136407943,16.1217756122979,26.6841011179029,22.9039637332097,20.7439354558783,17.3985648929822,17.3549284386011,17.1058958387964,17.992599904476,21.0537727969722,18.357786433598,21.6256568617879,21.1935987105699,17.1645053279739,23.2029388378007,16.5809138719886,20.3482711960098,17.2515985161892,20.4181607220677,18.2520729514106,8.83217783969334,5.86556290561921,20.1555457620117,16.6603856998033,15.3567540385368,16.2565670302307,18.8146493530256,17.5464666422308,18.0126215514345,15.2180500890047,14.2358718463353,13.5053142873689,15.0801125280162,18.502951899827,14.8172706210531,21.5716658077013,13.1844210423563,17.7235733196387,10.4317345524195,18.1655135049469,24.7957018480777,17.1067115390064,18.4254862809244,19.7783012090698,16.5047361894312,11.2183712464498,11.4609071324204,12.4631135561019,15.7119892356189,29.8652739231808,26.5354643402824,26.9834534861824,26.7775360232824,27.2530190520231,20.624693994295,18.7002489343027,17.6727397184789,16.748246204473,30.1913233707445,23.0727387554472,10.6092808858951,11.8712072635143,12.0196267059681,12.5435315554475,25.4959402429914,15.9172785887207,22.9780616783256,15.4468028055421,19.9486711045227,23.2833697844124,20.2337094753112,24.1965723343671,28.059055650902,22.8108630338238,25.193853447883,29.4953966488328,27.1115421529456,25.7475324275091,19.6028669121054,24.4757557718419,21.1458637398186,21.7990029580739,15.8945084087914,16.175212749724,10.0000316679772,18.1779067587149,19.5615096038079,18.7410597262386,18.5264122050207,18.4005974423465,16.0415045339324,17.8338214396964,17.8116708736954,17.82760733259,20.1596766752727,9.3183181762324,22.9942938037395,12.4645922567079,16.2886959353576,17.4868330350888,27.8764790513922,12.1390318077491,14.511530734308,11.3163047853539,12.1073776081117,17.2163682848599,19.1236936944484,19.9943551212628,20.3203505679291,16.7499481705982,9.48767477174989,14.4389760547462,12.2558258071364,13.8647042404109,7.76152102696527,11.574199891706,10.4630737848941,9.63191615051181,11.5184314421485,9.43841342255258,21.3551254337976,19.7003825903353,9.04166432025344,39.4078144530137,27.1260236849121,25.8139318692507,26.5006603686963,28.8887983551308,13.1166376483433,16.3174265769249,30.9276294244113,16.0981757011314,23.149315921214,30.1389531207506,33.6267800193722,28.3684934776088,23.2870449091582,20.9927178485487,21.0063960182724,5.72802370809068,16.1331356726379,16.4688768372747,19.1169453254588,14.2180041289839,16.3771922809633,16.5883146053329,18.2664137152992,21.4639872426904,13.4799572223465,18.6401793926078,13.5286305284206,19.2876344396733,14.3948886697675,19.2506676460607,16.5324574051496,16.726656423587,17.8383002741546,22.1347454234715,28.7314603726448,30.1980151032508,23.9064905194028,30.9690898215615,17.8398189455344,12.3253148597793,16.8897069871134,20.7670966974278,26.0272574763457,23.317917206874,22.4488081305357,20.6981222393703,24.157557709635,21.3751512490102,23.4873492582803,21.3590288441531,28.6348410344844,23.579959895982,24.4184548711471,15.4307833368298,21.8250001273302,15.0687883345109,22.709579529593,19.2309205480628,18.6500489798787,13.0408747049194,5.64751842617067,9.20650473014354,3.43737308063638,5.32744865265431,15.0718154349541,9.06472676867641,10.1253375034771,13.5096360967266,15.406841905463,11.39072685854,13.5961425335271,16.3600198094423,19.6343646617254,16.7743634777123,15.3017608718427,13.604419625301,20.8911924133518,14.4224540067226,16.6877988987744,14.9091354940641,15.9691958930851,16.4104917005886,13.6716600906028,13.3172317002128,12.922980515013,14.2888107384922,14.2537720912172,12.7320085506045,13.1867488257058,15.0142898537085,19.2006781335833,13.4881612681096,16.2136609164178,14.2439488299682,15.2457196272836,14.384483341585,15.5488776941857,16.0472523977084,13.3088031568945,15.1508413347589,18.6256978454953,15.6622126977146,15.9600106836179,11.4653262477615,16.0112487114347,14.2392029424629,15.9073493742878,19.3383948643468,18.1723915465401,19.8532277207564,18.7812946852541
|phase1_expression=12.1713123799643,24.4282785347553,23.6599604482559,33.875991666365,42.0752413154932,21.1527882608981,19.8570744506197,20.5306084272106,20.9775196005983,24.8108397901313,21.5734639964136,21.5384829287408,27.5633175189241,22.1173618120063,32.3116468961193,26.1193094932875,28.682037003254,21.6091583270393,25.9146279514846,19.9463136345074,14.5424026158329,23.9291192394134,21.9407822876706,15.0392877425802,13.9939661450974,15.5042630311055,17.6612418425221,13.574687659211,11.0213583284697,12.8535366177565,11.5299865540758,27.3063189587641,27.6779154413057,0,14.4425809875637,11.9688944658114,16.5377178572519,28.0416192593728,19.533383613095,26.1761871986899,13.5293242247133,24.589637458504,19.9059244742773,11.8343008897043,12.1652317463417,13.0318194034794,6.25913075478431,9.15705656797875,5.27246838562732,12.4435135407541,10.0790223570261,2.87505128729943,29.0263908479884,45.6978149467147,33.9454737133889,18.7799388306241,20.057340795713,14.9544906760458,8.29497489524351,6.34789175126439,6.97214543856797,7.45457970552091,6.22506357277798,11.2487464660175,10.8775299882367,8.5257613793532,5.39280198933128,5.37905627450176,9.02099627083756,6.75029691658453,9.04397333810943,7.9982275633065,7.28866185140325,10.534208732486,7.76348315247715,8.27296907949019,19.82085857989,13.2794831608595,12.595735727012,5.67111037239834,5.39777097254217,6.25096044668112,13.6799669510677,16.3201156909187,12.835052813252,14.142172102736,6.69146899755784,7.26957838718672,20.9004293599588,30.2286240427142,17.971598299504,12.9063581547208,6.11974200336975,4.31762553310254,9.09686984426737,9.40856462904405,10.3928870897496,12.9527045159324,5.45550609666024,9.89350808628953,19.1547050896285,23.0987659345772,5.09610479413291,28.4426681261332,13.4224445426953,11.1478340809043,14.1546844604139,13.4736978068491,22.2686579936568,32.5088284551966,20.8182392119363,25.879565656532,23.522780720118,21.7040602395776,27.9861122982977,20.4836543867371,17.3036477414062,23.1358971071859,33.6152009740952,19.4120219936891,25.1759331044849,21.819386391085,18.6391761218122,10.8328894894272,9.63454851341893,18.13745091981,21.087461913042,16.197373736822,19.4417447421789,15.1288545798871,11.8950156732843,4.39790232395025,11.9938780932671,12.7857728665165,13.5062228963714,11.5191296778108,18.4329248569072,24.5081732101883,11.1198013710817,12.2056276414155,16.6554166992261,13.5642241615749,13.3245976055958,16.8789395976001,21.4995337318196,21.3949912875699,17.615924217229,16.557015727297,16.5987354558289,19.6670323374532,16.0115522989193,10.302199424096,12.7901734643775,16.0195996600197,20.5782136407943,16.1217756122979,26.6841011179029,22.9039637332097,20.7439354558783,17.3985648929822,17.3549284386011,17.1058958387964,17.992599904476,21.0537727969722,18.357786433598,21.6256568617879,21.1935987105699,17.1645053279739,23.2029388378007,16.5809138719886,20.3482711960098,17.2515985161892,20.4181607220677,18.2520729514106,8.83217783969334,5.86556290561921,20.1555457620117,16.6603856998033,15.3567540385368,16.2565670302307,18.8146493530256,17.5464666422308,18.0126215514345,15.2180500890047,14.2358718463353,13.5053142873689,15.0801125280162,18.502951899827,14.8172706210531,21.5716658077013,13.1844210423563,17.7235733196387,10.4317345524195,18.1655135049469,24.7957018480777,17.1067115390064,18.4254862809244,19.7783012090698,16.5047361894312,11.2183712464498,11.4609071324204,12.4631135561019,15.7119892356189,29.8652739231808,26.5354643402824,26.9834534861824,26.7775360232824,27.2530190520231,20.624693994295,18.7002489343027,17.6727397184789,16.748246204473,30.1913233707445,23.0727387554472,10.6092808858951,11.8712072635143,12.0196267059681,12.5435315554475,25.4959402429914,15.9172785887207,22.9780616783256,15.4468028055421,19.9486711045227,23.2833697844124,20.2337094753112,24.1965723343671,28.059055650902,22.8108630338238,25.193853447883,29.4953966488328,27.1115421529456,25.7475324275091,19.6028669121054,24.4757557718419,21.1458637398186,21.7990029580739,15.8945084087914,16.175212749724,10.0000316679772,18.1779067587149,19.5615096038079,18.7410597262386,18.5264122050207,18.4005974423465,16.0415045339324,17.8338214396964,17.8116708736954,17.82760733259,20.1596766752727,9.3183181762324,22.9942938037395,12.4645922567079,16.2886959353576,17.4868330350888,27.8764790513922,12.1390318077491,14.511530734308,11.3163047853539,12.1073776081117,17.2163682848599,19.1236936944484,19.9943551212628,20.3203505679291,16.7499481705982,9.48767477174989,14.4389760547462,12.2558258071364,13.8647042404109,7.76152102696527,11.574199891706,10.4630737848941,9.63191615051181,11.5184314421485,9.43841342255258,21.3551254337976,19.7003825903353,9.04166432025344,39.4078144530137,27.1260236849121,25.8139318692507,26.5006603686963,28.8887983551308,13.1166376483433,16.3174265769249,30.9276294244113,16.0981757011314,23.149315921214,30.1389531207506,33.6267800193722,28.3684934776088,23.2870449091582,20.9927178485487,21.0063960182724,5.72802370809068,16.1331356726379,16.4688768372747,19.1169453254588,14.2180041289839,16.3771922809633,16.5883146053329,18.2664137152992,21.4639872426904,13.4799572223465,18.6401793926078,13.5286305284206,19.2876344396733,14.3948886697675,19.2506676460607,16.5324574051496,16.726656423587,17.8383002741546,22.1347454234715,28.7314603726448,30.1980151032508,23.9064905194028,30.9690898215615,17.8398189455344,12.3253148597793,16.8897069871134,20.7670966974278,26.0272574763457,23.317917206874,22.4488081305357,20.6981222393703,24.157557709635,21.3751512490102,23.4873492582803,21.3590288441531,28.6348410344844,23.579959895982,24.4184548711471,15.4307833368298,21.8250001273302,15.0687883345109,22.709579529593,19.2309205480628,18.6500489798787,13.0408747049194,5.64751842617067,9.20650473014354,3.43737308063638,5.32744865265431,15.0718154349541,9.06472676867641,10.1253375034771,13.5096360967266,15.406841905463,11.39072685854,13.5961425335271,16.3600198094423,19.6343646617254,16.7743634777123,15.3017608718427,13.604419625301,20.8911924133518,14.4224540067226,16.6877988987744,14.9091354940641,15.9691958930851,16.4104917005886,13.6716600906028,13.3172317002128,12.922980515013,14.2888107384922,14.2537720912172,12.7320085506045,13.1867488257058,15.0142898537085,19.2006781335833,13.4881612681096,16.2136609164178,14.2439488299682,15.2457196272836,14.384483341585,15.5488776941857,16.0472523977084,13.3088031568945,15.1508413347589,18.6256978454953,15.6622126977146,15.9600106836179,11.4653262477615,16.0112487114347,14.2392029424629,15.9073493742878,19.3383948643468,18.1723915465401,19.8532277207564,18.7812946852541
|short_description=p2@Clasp2
}}
}}

Latest revision as of 06:48, 26 September 2015

Short description:p2@Clasp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clasp2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000111849, ENSMUST00000167613, NM_001114347, uc009rwq.1, uc009rwr.2_5end
EntrezGene:Clasp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Clasp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I524.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I333.88
CD326+ enterocyte, pool2.CNhs13197.11849-124I442.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.86
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F121.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.12
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A132.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.12
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A528.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.61
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H223.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.94
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.99
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I213.57
Ileum epithelium, pool1.CNhs13199.10252-104B911.02
Ileum epithelium, pool2.CNhs13232.10253-104C112.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I327.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H224.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.03
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I945.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.06
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D920.90
Mouse Schwann, donor2.CNhs12573.11746-123F930.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.47
accessory axillary lymph node, adult.CNhs10475.1063-29H922.27
adrenal gland, adult.CNhs10508.49-24D732.51
adrenal gland, embryo E14.CNhs11038.406-44C520.82
adrenal gland, embryo E16.CNhs11004.1254-43D625.88
adrenal gland, embryo E17.CNhs11043.1263-45I123.52
adrenal gland, embryo E18.CNhs11026.1262-18F521.70
adrenal gland, neonate N00.CNhs11191.1311-23C127.99
adrenal gland, neonate N25.CNhs11223.1377-27I320.48
amnion, adult pregnant day17.5.CNhs10488.583-22A817.30
aorta, adult.CNhs10498.46-23H123.14
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F519.41
bone (os femoris), neonate N16.CNhs11225.1525-43A625.18
bone (os femoris), neonate N20.CNhs11195.1350-25C321.82
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H718.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.09
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.44
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B211.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.51
epididymis, adult.CNhs10490.58-23B211.12
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C616.66
eyeball, embryo E14.CNhs10521.399-16E213.56
eyeball, embryo E15.CNhs10593.426-16C913.32
eyeball, embryo E17.CNhs11023.1261-18D416.88
eyeball, neonate N00.CNhs11207.633-15C621.50
eyeball, neonate N01.CNhs11140.1532-43E721.39
eyeball, neonate N02.CNhs11205.1551-44G817.62
eyeball, neonate N16.CNhs11188.777-19A216.56
forelimb, embryo E11.CNhs10596.335-25E216.60
forelimb, embryo E12.CNhs10600.359-14H219.67
forelimb, embryo E13.CNhs10589.384-1E216.01
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B520.58
gonad, embryo E13.CNhs11044.1564-45I616.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.74
heart, embryo E11.CNhs10586.331-24E917.40
heart, embryo E12.CNhs11015.353-12F517.35
heart, embryo E13.CNhs11013.376-3I917.11
heart, embryo E14.CNhs10597.403-26D417.99
heart, embryo E15.CNhs11017.431-16C821.05
heart, embryo E16.CNhs11021.457-17C618.36
heart, embryo E17.CNhs11025.479-18E521.63
heart, embryo E18.CNhs11030.1283-20G321.19
heart, neonate N00.CNhs11213.639-21E317.16
heart, neonate N03.CNhs11221.1349-25I223.20
heart, neonate N10.CNhs11118.749-24G116.58
heart, neonate N16.CNhs11209.782-15G120.35
heart, neonate N20.CNhs11127.821-26I617.25
heart, neonate N25.CNhs11196.1351-25D320.42
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I320.16
intestine, adult.CNhs10496.178-9A316.66
intestine, embryo E12.CNhs11019.1251-16I515.36
intestine, embryo E13.CNhs11010.381-16D516.26
intestine, embryo E15.CNhs10602.976-16D818.81
intestine, embryo E16.CNhs10585.463-22H417.55
intestine, embryo E17.CNhs10582.482-18D318.01
intestine, embryo E18.CNhs10526.1289-20F715.22
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E913.51
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F218.50
intestine, neonate N10.CNhs11098.755-23A514.82
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E313.18
intestine, neonate N30.CNhs11131.1384-42G117.72
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F818.17
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C718.43
kidney, neonate N00.CNhs11214.646-21G719.78
kidney, neonate N10.CNhs11206.758-6D516.50
kidney, neonate N20.CNhs11113.832-19I111.22
kidney, neonate N25.CNhs11122.1353-25F311.46
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B215.71
liver, embryo E12.CNhs10601.355-15F829.87
liver, embryo E13.CNhs10524.378-3H626.54
liver, embryo E14.CNhs10594.409-16E126.98
liver, embryo E15.CNhs10520.433-16D726.78
liver, embryo E16.CNhs10523.462-17F527.25
liver, embryo E17.CNhs10510.481-18A320.62
liver, embryo E18.CNhs10579.499-43G418.70
liver, neonate N00.CNhs11117.641-24F417.67
liver, neonate N03.CNhs11123.1345-25G216.75
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H223.07
liver, neonate N10.CNhs11115.751-24B910.61
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H112.02
liver, neonate N30.CNhs11106.1382-42D112.54
lung, adult.CNhs10474.28-22B125.50
lung, embryo E12.CNhs10522.354-16G215.92
lung, embryo E14.CNhs10604.404-26F822.98
lung, embryo E15.CNhs11020.432-17C515.45
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A623.28
lung, embryo E18.CNhs10583.1287-20I620.23
lung, neonate N00.CNhs11224.640-42C624.20
lung, neonate N06.CNhs11212.683-20E528.06
lung, neonate N07.CNhs11111.715-19A322.81
lung, neonate N10.CNhs11219.750-23E625.19
lung, neonate N20.CNhs11109.822-18A429.50
lung, neonate N25.CNhs11119.1359-25C727.11
lung, neonate N30.CNhs11133.1394-42H225.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A124.48
mammary gland, adult lactating day02.CNhs10480.595-22B621.15
mammary gland, adult pregnant day19.CNhs10476.588-5H221.80
medulla oblongata, adult.CNhs10477.17-12C215.89
medulla oblongata, neonate N30.CNhs11200.1396-42A316.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.40
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.83
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.16
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I722.99
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I416.29
oviduct, adult pregnant day01.CNhs10500.988-6G617.49
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F214.51
pancreas, embryo E16.CNhs11003.460-26E511.32
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G919.12
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D820.32
pancreas, neonate N16.CNhs11136.787-43B616.75
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E613.86
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B910.46
pituitary gland, embryo E16.CNhs11036.449-43F69.63
pituitary gland, embryo E17.CNhs11039.1265-44F511.52
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I721.36
placenta, adult pregnant day17.CNhs10464.577-18G319.70
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C339.41
skin, neonate N00.CNhs11124.650-25G427.13
skin, neonate N03.CNhs11215.662-22H325.81
skin, neonate N06.CNhs11097.693-20I526.50
skin, neonate N10.CNhs11108.762-6C428.89
small intestine, neonate N16.CNhs11114.790-21I113.12
spinal cord, adult.CNhs10505.24-13C916.32
spleen, adult.CNhs10465.25-2G230.93
spleen, embryo E16.CNhs11035.461-43C116.10
spleen, embryo E18.CNhs11011.1271-21F223.15
spleen, neonate N10.CNhs11116.752-24D130.14
spleen, neonate N20.CNhs11112.824-19H133.63
spleen, neonate N25.CNhs11099.1354-25G328.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.01
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E316.13
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D419.12
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B816.59
stomach, neonate N07.CNhs11210.718-18A918.27
stomach, neonate N25.CNhs11104.1355-25E421.46
stomach, neonate N30.CNhs11134.1386-42I113.48
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F519.29
testis, embryo E15.CNhs11034.443-27C514.39
testis, embryo E16.CNhs11033.470-26G519.25
testis, embryo E17.CNhs11029.486-18I516.53
testis, embryo E18.CNhs11027.503-18G516.73
testis, neonate N00.CNhs11189.1300-22B717.84
testis, neonate N07.CNhs11222.726-26I422.13
testis, neonate N10.CNhs11204.763-44D928.73
testis, neonate N20.CNhs11110.839-18H330.20
testis, neonate N30.CNhs11130.1391-42E223.91
thymus, adult.CNhs10471.38-12B530.97
thymus, embryo E14.CNhs11041.402-44I417.84
thymus, embryo E15.CNhs11005.430-45I212.33
thymus, embryo E16.CNhs11002.456-26C516.89
thymus, embryo E17.CNhs10581.478-18C120.77
thymus, embryo E18.CNhs10595.1273-19G426.03
thymus, neonate N02.CNhs11181.1541-43F823.32
thymus, neonate N03.CNhs11137.2104-43C722.45
thymus, neonate N06.CNhs11197.681-26C420.70
thymus, neonate N07.CNhs11211.713-19D324.16
thymus, neonate N10.CNhs11194.748-24E421.38
thymus, neonate N20.CNhs11186.820-7A223.49
thymus, neonate N25.CNhs11125.1362-25G721.36
thymus, neonate N30.CNhs11132.1393-42G228.63
tongue, adult.CNhs10499.32-1B423.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H324.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.83
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F522.71
uterus, adult.CNhs10509.92-27E519.23
vagina, adult.CNhs10502.89-27D518.65
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I813.60
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H219.63
whole body, embryo E14.5.CNhs10578.420-27D216.77
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F213.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.25
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.73
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.47
whole body, embryo E17.5.CNhs10513.490-9F916.01
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B315.91
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C618.17
whole body, neonate N06.CNhs10515.692-21D119.85
whole body, neonate N10.CNhs10518.761-6B418.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm1.14e-10120
mesoderm-derived structure1.14e-10120
presumptive mesoderm1.14e-10120
primordium7.80e-08134
respiratory system1.11e-0742
respiratory tract1.14e-0741
hemopoietic organ1.70e-0729
immune organ1.70e-0729
lateral plate mesoderm2.09e-0787
hematopoietic system2.27e-0745
blood island2.27e-0745
endo-epithelium4.63e-0769
hemolymphoid system4.84e-0748
immune system4.84e-0748
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:113650557..113650601,%2B&oldid=4239089"