Personal tools

UBERON:0005641: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0005641 |name=otocyst epithelium |namespace= |def= |xref=EHDAA2:0001344;;EMAPA:16671;;EMAPA:16996;;EMAPA:16999;;VHOG:0000986 |is_a=UBERON:0000483;;UB...")
 
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0005641
|alt_id=
|name=otocyst epithelium
|namespace=
|def=
|xref=EHDAA2:0001344;;EMAPA:16671;;EMAPA:16996;;EMAPA:16999;;VHOG:0000986
|is_a=UBERON:0000483;;UBERON:0004121;;UBERON:0005291
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005641
|is_a=UBERON:0005291 ;;UBERON:0010314 ;;UBERON:0010371
|is_obsolete=
|located_in=
|located_in=
|name=otocyst epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003051
|part_of=UBERON:0003051
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym=
|union_of=
|xref=EHDAA2:0001344;;EMAPA:16671;;EMAPA:16996;;EMAPA:16999;;VHOG:0000986
}}
}}

Latest revision as of 17:54, 12 September 2014

Name:otocyst epithelium
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0001344
EMAPA:16671
EMAPA:16996
EMAPA:16999

VHOG:0000986

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005291(embryonic tissue),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0010371(ecto-epithelium)
part_of:UBERON:0003051(ear vesicle)



Children

develops from:UBERON:0001849 (membranous labyrinth),UBERON:0010113 (future membranous labyrinth)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005641 (otocyst epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_4e73b244d3d11a5635caac6413b9528bp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_4e73b244d3d11a5635caac6413b9528bp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_4e73b244d3d11a5635caac6413b9528bp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_4e73b244d3d11a5635caac6413b9528bp4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_4e73b244d3d11a5635caac6413b9528bp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_4e73b244d3d11a5635caac6413b9528bp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_4e73b244d3d11a5635caac6413b9528bp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_4e73b244d3d11a5635caac6413b9528bp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_4e73b244d3d11a5635caac6413b9528bp4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_4e73b244d3d11a5635caac6413b9528bp21@Espn
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_4e73b244d3d11a5635caac6413b9528bp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_4e73b244d3d11a5635caac6413b9528bp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_4e73b244d3d11a5635caac6413b9528bp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_4e73b244d3d11a5635caac6413b9528bp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_4e73b244d3d11a5635caac6413b9528bp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_4e73b244d3d11a5635caac6413b9528bp4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_4e73b244d3d11a5635caac6413b9528bp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_4e73b244d3d11a5635caac6413b9528bp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_4e73b244d3d11a5635caac6413b9528bp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_4e73b244d3d11a5635caac6413b9528bp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_4e73b244d3d11a5635caac6413b9528bp@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_4e73b244d3d11a5635caac6413b9528bp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_4e73b244d3d11a5635caac6413b9528bp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_4e73b244d3d11a5635caac6413b9528bp4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_4e73b244d3d11a5635caac6413b9528bp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_4e73b244d3d11a5635caac6413b9528bp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_4e73b244d3d11a5635caac6413b9528bp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_4e73b244d3d11a5635caac6413b9528bp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_4e73b244d3d11a5635caac6413b9528bp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_4e73b244d3d11a5635caac6413b9528bp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_4e73b244d3d11a5635caac6413b9528bp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_4e73b244d3d11a5635caac6413b9528bp1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_4e73b244d3d11a5635caac6413b9528bp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_4e73b244d3d11a5635caac6413b9528bp@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_4e73b244d3d11a5635caac6413b9528bp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_4e73b244d3d11a5635caac6413b9528bp2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_4e73b244d3d11a5635caac6413b9528bp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_4e73b244d3d11a5635caac6413b9528bp10@Otof
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_4e73b244d3d11a5635caac6413b9528bp21@Espn
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_4e73b244d3d11a5635caac6413b9528bp2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_4e73b244d3d11a5635caac6413b9528bp1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_4e73b244d3d11a5635caac6413b9528bp1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_4e73b244d3d11a5635caac6413b9528bp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_4e73b244d3d11a5635caac6413b9528bp10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_4e73b244d3d11a5635caac6413b9528bp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_4e73b244d3d11a5635caac6413b9528bp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_4e73b244d3d11a5635caac6413b9528bp@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_4e73b244d3d11a5635caac6413b9528bp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_4e73b244d3d11a5635caac6413b9528bp15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_4e73b244d3d11a5635caac6413b9528bp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_4e73b244d3d11a5635caac6413b9528bp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_4e73b244d3d11a5635caac6413b9528bp@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_4e73b244d3d11a5635caac6413b9528bp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_4e73b244d3d11a5635caac6413b9528bp3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_4e73b244d3d11a5635caac6413b9528bp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_4e73b244d3d11a5635caac6413b9528bp2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_4e73b244d3d11a5635caac6413b9528bp10@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_4e73b244d3d11a5635caac6413b9528bp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_4e73b244d3d11a5635caac6413b9528bp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_4e73b244d3d11a5635caac6413b9528bp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_4e73b244d3d11a5635caac6413b9528bp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_4e73b244d3d11a5635caac6413b9528bp7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_4e73b244d3d11a5635caac6413b9528bp3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_4e73b244d3d11a5635caac6413b9528bp1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_4e73b244d3d11a5635caac6413b9528bp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_4e73b244d3d11a5635caac6413b9528bp@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_4e73b244d3d11a5635caac6413b9528bp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_4e73b244d3d11a5635caac6413b9528bp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_4e73b244d3d11a5635caac6413b9528bp6@Jag1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0005641&oldid=3277796"