FFCP PHASE1:Hg19::chr10:95351763..95351773,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:95351763..95351773,+ to FFCP PHASE1:Hg19::chr10:95351763..95351773,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_CU676593_5end | |||
|cluster_id=chr10:95351763..95351773,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_3_at_CU676593_5end | |||
|id=chr10:95351763..95351773,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.04e-22!12;CL:0000417!2.04e-22!12;CL:0000668!2.04e-22!12;CL:0000414!2.04e-22!12;CL:0000412!2.04e-22!12;CL:0000182!2.04e-22!12;CL:0000223!6.63e-09!59;CL:0000313!1.65e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.36e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.70e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.48e-11;11!UBERON:0009497;9.72e-10;13 | |||
|ontology_enrichment_disease=DOID:2152!1.65e-08!1;DOID:225!1.78e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.04e-24!19;UBERON:0006925!1.04e-24!19;UBERON:0008836!1.04e-24!19;UBERON:0008835!3.40e-21!22;UBERON:0003894!3.40e-21!22;UBERON:0009854!3.16e-20!23;UBERON:0007499!1.60e-18!25;UBERON:0009497!1.60e-18!25;UBERON:0000015!1.60e-18!25;UBERON:0002423!1.60e-18!25;UBERON:0006235!1.60e-18!25;UBERON:0004161!1.60e-18!25;UBERON:0005057!9.11e-18!26;UBERON:0009856!9.11e-18!26;UBERON:0002365!1.01e-14!31;UBERON:0002330!1.01e-14!31;UBERON:0002368!6.51e-13!35;UBERON:0000949!2.76e-12!45;UBERON:0003929!4.74e-10!54;UBERON:0002530!4.42e-09!59;UBERON:0004911!1.65e-08!1;UBERON:0005172!8.29e-08!55;UBERON:0005173!8.29e-08!55;UBERON:0001041!2.30e-07!98;UBERON:0002417!6.26e-07!61;UBERON:0000916!6.26e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.01e-37;19!UBERON:0006925;3.01e-37;19!UBERON:0002423;1.90e-28;25!UBERON:0002365;5.79e-23;31!UBERON:0002330;5.79e-23;31!UBERON:0002368;7.20e-20;33!UBERON:0000949;2.21e-14;43!UBERON:0005172;2.27e-10;52!UBERON:0005173;2.27e-10;52!UBERON:0002417;4.92e-08;58!UBERON:0000916;4.92e-08;58!UBERON:0002530;1.43e-07;57!UBERON:0001007;1.90e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.01e-37,19;UBERON:0006925,3.01e-37,19;UBERON:0008836,3.01e-37,19;UBERON:0008835,3.00e-32,22;UBERON:0003894,3.00e-32,22;UBERON:0009854,7.15e-31,23;UBERON:0007499,1.90e-28,25;UBERON:0009497,1.90e-28,25;UBERON:0000015,1.90e-28,25;UBERON:0002423,1.90e-28,25;UBERON:0006235,1.90e-28,25;UBERON:0004161,1.90e-28,25;UBERON:0009856,2.25e-27,26;UBERON:0002365,4.83e-23,31;UBERON:0002330,4.83e-23,31;UBERON:0002368,1.83e-20,35;UBERON:0000949,5.15e-16,45;UBERON:0003929,2.07e-13,54;UBERON:0005172,2.07e-13,54;UBERON:0005173,2.07e-13,54;UBERON:0002530,2.64e-12,59;UBERON:0002417,4.17e-12,60;UBERON:0000916,4.17e-12,60;UBERON:0005911,6.11e-09,82;UBERON:0001041,1.93e-08,87;UBERON:0005177,2.64e-07,101 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,3.9313088667105,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.741742725430498,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,6.62534444561107,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,3.9313088667105,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.741742725430498,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,6.62534444561107,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p3@CU676593 | |||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p3@CU676593 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU676593_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -59bp_to_CU676593_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.70e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.01e-37 | 19 |
digestive gland | 3.01e-37 | 19 |
liver bud | 3.01e-37 | 19 |
hepatic diverticulum | 3.00e-32 | 22 |
liver primordium | 3.00e-32 | 22 |
digestive tract diverticulum | 7.15e-31 | 23 |
epithelial sac | 1.90e-28 | 25 |
epithelium of foregut-midgut junction | 1.90e-28 | 25 |
anatomical boundary | 1.90e-28 | 25 |
hepatobiliary system | 1.90e-28 | 25 |
foregut-midgut junction | 1.90e-28 | 25 |
septum transversum | 1.90e-28 | 25 |
sac | 2.25e-27 | 26 |
exocrine gland | 4.83e-23 | 31 |
exocrine system | 4.83e-23 | 31 |
endocrine gland | 1.83e-20 | 35 |
endocrine system | 5.15e-16 | 45 |
gut epithelium | 2.07e-13 | 54 |
abdomen element | 2.07e-13 | 54 |
abdominal segment element | 2.07e-13 | 54 |
gland | 2.64e-12 | 59 |
abdominal segment of trunk | 4.17e-12 | 60 |
abdomen | 4.17e-12 | 60 |
endo-epithelium | 6.11e-09 | 82 |
foregut | 1.93e-08 | 87 |
trunk region element | 2.64e-07 | 101 |