FFCP PHASE1:Hg19::chr11:2159738..2159755,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2159738..2159755,- to FFCP PHASE1:Hg19::chr11:2159738..2159755,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=448bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|cluster_id=chr11:2159738..2159755,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_43_at_IGF2_5end | |||
|id=chr11:2159738..2159755,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.15e-18;19!CL:0000669;3.15e-09;4!CL:0002541;3.60e-08;3!CL:0002537;4.13e-08;5!CL:0002577;1.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.50e-18,19;CL:0000669,6.41e-09,4;CL:0002541,4.02e-08,3;CL:0002537,4.54e-08,5;CL:0002577,1.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.04e-14!14;UBERON:0000158!1.04e-14!14;UBERON:0007023!1.14e-12!115;UBERON:0000478!5.00e-09!24;UBERON:0000481!1.30e-08!347;UBERON:0003124!2.17e-08!7;UBERON:0000305!6.03e-08!7;UBERON:0001046!8.99e-08!19;UBERON:0000062!1.24e-07!511;UBERON:0000468!1.45e-07!659;UBERON:0002616!4.11e-07!59;UBERON:0004119!4.21e-07!169;UBERON:0000925!4.21e-07!169;UBERON:0006595!4.21e-07!169;UBERON:0000064!4.57e-07!219;UBERON:0001008!4.75e-07!45;UBERON:0004121!7.77e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-19;24!UBERON:0005631;1.68e-18;10!UBERON:0000158;1.68e-18;10!UBERON:0000305;3.86e-12;7!UBERON:0001987;1.13e-09;4!UBERON:0000922;8.07e-09;49!UBERON:0003124;3.60e-08;3!UBERON:0000920;3.60e-08;3!UBERON:0000077;3.64e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.41e-26,14;UBERON:0000158,2.41e-26,14;UBERON:0000478,5.67e-19,24;UBERON:0003124,4.30e-16,7;UBERON:0000305,4.53e-12,7;UBERON:0004871,1.93e-10,8;UBERON:0001987,1.16e-09,4;UBERON:0004340,1.16e-09,4;UBERON:0004923,2.00e-08,66;UBERON:0004119,2.76e-08,160;UBERON:0000925,2.76e-08,160;UBERON:0006595,2.76e-08,160;UBERON:0000920,4.02e-08,3;UBERON:0001008,4.07e-07,48 | |||
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| ||
|short_description=p43@IGF2 | |||
}} | }} |
Latest revision as of 08:19, 17 September 2015
Short description: | p43@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 448bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.50e-18 | 19 |
pericyte cell | 6.41e-09 | 4 |
chorionic membrane mesenchymal stem cell | 4.02e-08 | 3 |
amnion mesenchymal stem cell | 4.54e-08 | 5 |
placental epithelial cell | 1.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.41e-26 | 14 |
membranous layer | 2.41e-26 | 14 |
extraembryonic structure | 5.67e-19 | 24 |
chorion | 4.30e-16 | 7 |
amnion | 4.53e-12 | 7 |
somatic layer of lateral plate mesoderm | 1.93e-10 | 8 |
placenta | 1.16e-09 | 4 |
allantois | 1.16e-09 | 4 |
organ component layer | 2.00e-08 | 66 |
endoderm-derived structure | 2.76e-08 | 160 |
endoderm | 2.76e-08 | 160 |
presumptive endoderm | 2.76e-08 | 160 |
egg chorion | 4.02e-08 | 3 |
renal system | 4.07e-07 | 48 |