FFCP PHASE1:Hg19::chr11:62302536..62302554,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62302536..62302554,- to FFCP PHASE1:Hg19::chr11:62302536..62302554,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:62302536..62302554,- | |||
|description=CAGE_peak_at_chr11:62302536..62302554,- | |||
|id=chr11:62302536..62302554,- | |||
|ontology_enrichment_celltype=CL:0002057!1.44e-10!42;CL:0000860!1.35e-09!45;CL:0002009!2.73e-09!65;CL:0000557!4.27e-09!71;CL:0002194!1.59e-08!63;CL:0000576!1.59e-08!63;CL:0000040!1.59e-08!63;CL:0000559!1.59e-08!63;CL:0000839!7.20e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.10e-10;33!CL:0002057;5.10e-10;33!CL:0000473;2.01e-09;39!CL:0000234;2.01e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.03e-11,48;CL:0000234,3.03e-11,48;CL:0000557,1.52e-10,67;CL:0000860,1.65e-10,42;CL:0002057,1.65e-10,42;CL:0002009,2.26e-10,61;CL:0002194,2.03e-09,59;CL:0000576,2.03e-09,59;CL:0000040,2.03e-09,59;CL:0000559,2.03e-09,59;CL:0000839,3.02e-09,66;CL:0002320,2.59e-08,361;CL:0000134,3.28e-08,354;CL:0000048,2.35e-07,427;CL:0000766,2.47e-07,72;CL:0000057,5.73e-07,76;CL:0000723,7.62e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!6.58e-09!101;UBERON:0001434!6.58e-09!101;UBERON:0002204!6.88e-09!167;UBERON:0002371!8.44e-09!80;UBERON:0001474!3.17e-08!86;UBERON:0000926!5.11e-08!448;UBERON:0004120!5.11e-08!448;UBERON:0006603!5.11e-08!448;UBERON:0002390!5.59e-07!102;UBERON:0003061!5.59e-07!102;UBERON:0003081!7.16e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.84e-11,315;UBERON:0004120,6.84e-11,315;UBERON:0006603,6.84e-11,315;UBERON:0002371,5.25e-10,76;UBERON:0002204,1.43e-09,167;UBERON:0001434,2.91e-09,100;UBERON:0001474,8.52e-09,82;UBERON:0002384,4.21e-08,371;UBERON:0004765,8.78e-08,90;UBERON:0003081,1.67e-07,203;UBERON:0002390,5.19e-07,98;UBERON:0003061,5.19e-07,98 | |||
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| ||
|short_description=p@chr11:62302536..62302554,- | |||
}} | }} |
Latest revision as of 23:39, 23 July 2015
Short description: | p@chr11:62302536..62302554, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62302536..62302554, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.03e-11 | 48 |
phagocyte | 3.03e-11 | 48 |
granulocyte monocyte progenitor cell | 1.52e-10 | 67 |
classical monocyte | 1.65e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-10 | 42 |
macrophage dendritic cell progenitor | 2.26e-10 | 61 |
monopoietic cell | 2.03e-09 | 59 |
monocyte | 2.03e-09 | 59 |
monoblast | 2.03e-09 | 59 |
promonocyte | 2.03e-09 | 59 |
myeloid lineage restricted progenitor cell | 3.02e-09 | 66 |
connective tissue cell | 2.59e-08 | 361 |
mesenchymal cell | 3.28e-08 | 354 |
multi fate stem cell | 2.35e-07 | 427 |
myeloid leukocyte | 2.47e-07 | 72 |
fibroblast | 5.73e-07 | 76 |
somatic stem cell | 7.62e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.84e-11 | 315 |
mesoderm-derived structure | 6.84e-11 | 315 |
presumptive mesoderm | 6.84e-11 | 315 |
bone marrow | 5.25e-10 | 76 |
musculoskeletal system | 1.43e-09 | 167 |
skeletal system | 2.91e-09 | 100 |
bone element | 8.52e-09 | 82 |
connective tissue | 4.21e-08 | 371 |
skeletal element | 8.78e-08 | 90 |
lateral plate mesoderm | 1.67e-07 | 203 |
hematopoietic system | 5.19e-07 | 98 |
blood island | 5.19e-07 | 98 |